Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VBX:B6:B33
Extra
PDB:
ATOM 1 O3' G A 5 40.957 98.248 57.931 1.00118.97 O
ATOM 2 P G A 6 39.973 99.461 58.335 1.00118.52 P
ATOM 3 OP1 G A 6 40.263 100.623 57.455 1.00118.24 O
ATOM 4 OP2 G A 6 40.028 99.628 59.811 1.00118.27 O
ATOM 5 O5' G A 6 38.534 98.903 57.942 1.00118.27 O
ATOM 6 C5' G A 6 38.276 98.476 56.607 1.00117.51 C
ATOM 7 C4' G A 6 36.812 98.164 56.418 1.00117.19 C
ATOM 8 O4' G A 6 36.475 96.843 56.927 1.00117.13 O
ATOM 9 C3' G A 6 35.845 99.082 57.136 1.00116.92 C
ATOM 10 O3' G A 6 35.694 100.340 56.508 1.00115.96 O
ATOM 11 C2' G A 6 34.569 98.250 57.156 1.00117.08 C
ATOM 12 O2' G A 6 33.858 98.304 55.932 1.00117.17 O
ATOM 13 C1' G A 6 35.125 96.845 57.387 1.00116.54 C
ATOM 14 N9 G A 6 35.117 96.559 58.824 1.00115.33 N
ATOM 15 C8 G A 6 36.124 96.823 59.715 1.00115.07 C
ATOM 16 N7 G A 6 35.821 96.503 60.943 1.00114.17 N
ATOM 17 C5 G A 6 34.544 95.989 60.858 1.00113.96 C
ATOM 18 C6 G A 6 33.714 95.484 61.870 1.00113.82 C
ATOM 19 O6 G A 6 33.972 95.379 63.091 1.00112.42 O
ATOM 20 N1 G A 6 32.480 95.073 61.354 1.00113.75 N
ATOM 21 C2 G A 6 32.116 95.136 60.010 1.00113.37 C
ATOM 22 N2 G A 6 30.887 94.698 59.668 1.00112.80 N
ATOM 23 N3 G A 6 32.906 95.601 59.062 1.00113.34 N
ATOM 24 C4 G A 6 34.087 96.007 59.549 1.00114.18 C
ATOM 25 P C A 7 35.358 101.620 57.413 1.00115.18 P
ATOM 26 OP1 C A 7 35.372 102.824 56.541 1.00115.48 O
ATOM 27 OP2 C A 7 36.227 101.567 58.615 1.00114.31 O
ATOM 28 O5' C A 7 33.864 101.340 57.881 1.00114.17 O
TER
ATOM 1 O3' C B 32 25.736 91.021 62.615 1.00 99.82 O
ATOM 2 P C B 33 26.521 89.681 62.217 1.00103.20 P
ATOM 3 OP1 C B 33 25.584 88.837 61.438 1.00103.67 O
ATOM 4 OP2 C B 33 27.158 89.134 63.446 1.00103.02 O
ATOM 5 O5' C B 33 27.692 90.184 61.256 1.00103.66 O
ATOM 6 C5' C B 33 27.402 90.622 59.936 1.00104.98 C
ATOM 7 C4' C B 33 28.666 90.773 59.139 1.00105.95 C
ATOM 8 O4' C B 33 29.412 91.916 59.604 1.00106.57 O
ATOM 9 C3' C B 33 29.664 89.632 59.216 1.00106.75 C
ATOM 10 O3' C B 33 29.354 88.570 58.352 1.00108.03 O
ATOM 11 C2' C B 33 30.946 90.294 58.761 1.00106.94 C
ATOM 12 O2' C B 33 31.026 90.356 57.351 1.00107.49 O
ATOM 13 C1' C B 33 30.776 91.691 59.350 1.00107.02 C
ATOM 14 N1 C B 33 31.534 91.797 60.586 1.00106.90 N
ATOM 15 C2 C B 33 32.846 92.052 60.428 1.00106.39 C
ATOM 16 O2 C B 33 33.248 92.179 59.251 1.00106.04 O
ATOM 17 N3 C B 33 33.653 92.158 61.518 1.00106.23 N
ATOM 18 C4 C B 33 33.128 92.001 62.747 1.00106.28 C
ATOM 19 N4 C B 33 33.931 92.106 63.825 1.00105.88 N
ATOM 20 C5 C B 33 31.750 91.731 62.937 1.00106.30 C
ATOM 21 C6 C B 33 30.992 91.638 61.838 1.00106.87 C
ATOM 22 P G B 34 30.205 87.216 58.449 1.00109.58 P
ATOM 23 OP1 G B 34 29.612 86.250 57.490 1.00110.03 O
ATOM 24 OP2 G B 34 30.313 86.861 59.889 1.00108.92 O
ATOM 25 O5' G B 34 31.653 87.622 57.924 1.00109.72 O
TER
ATOM 2 P G A 6 39.973 99.461 58.335 1.00118.52 P
ATOM 3 OP1 G A 6 40.263 100.623 57.455 1.00118.24 O
ATOM 4 OP2 G A 6 40.028 99.628 59.811 1.00118.27 O
ATOM 5 O5' G A 6 38.534 98.903 57.942 1.00118.27 O
ATOM 6 C5' G A 6 38.276 98.476 56.607 1.00117.51 C
ATOM 7 C4' G A 6 36.812 98.164 56.418 1.00117.19 C
ATOM 8 O4' G A 6 36.475 96.843 56.927 1.00117.13 O
ATOM 9 C3' G A 6 35.845 99.082 57.136 1.00116.92 C
ATOM 10 O3' G A 6 35.694 100.340 56.508 1.00115.96 O
ATOM 11 C2' G A 6 34.569 98.250 57.156 1.00117.08 C
ATOM 12 O2' G A 6 33.858 98.304 55.932 1.00117.17 O
ATOM 13 C1' G A 6 35.125 96.845 57.387 1.00116.54 C
ATOM 14 N9 G A 6 35.117 96.559 58.824 1.00115.33 N
ATOM 15 C8 G A 6 36.124 96.823 59.715 1.00115.07 C
ATOM 16 N7 G A 6 35.821 96.503 60.943 1.00114.17 N
ATOM 17 C5 G A 6 34.544 95.989 60.858 1.00113.96 C
ATOM 18 C6 G A 6 33.714 95.484 61.870 1.00113.82 C
ATOM 19 O6 G A 6 33.972 95.379 63.091 1.00112.42 O
ATOM 20 N1 G A 6 32.480 95.073 61.354 1.00113.75 N
ATOM 21 C2 G A 6 32.116 95.136 60.010 1.00113.37 C
ATOM 22 N2 G A 6 30.887 94.698 59.668 1.00112.80 N
ATOM 23 N3 G A 6 32.906 95.601 59.062 1.00113.34 N
ATOM 24 C4 G A 6 34.087 96.007 59.549 1.00114.18 C
ATOM 25 P C A 7 35.358 101.620 57.413 1.00115.18 P
ATOM 26 OP1 C A 7 35.372 102.824 56.541 1.00115.48 O
ATOM 27 OP2 C A 7 36.227 101.567 58.615 1.00114.31 O
ATOM 28 O5' C A 7 33.864 101.340 57.881 1.00114.17 O
TER
ATOM 1 O3' C B 32 25.736 91.021 62.615 1.00 99.82 O
ATOM 2 P C B 33 26.521 89.681 62.217 1.00103.20 P
ATOM 3 OP1 C B 33 25.584 88.837 61.438 1.00103.67 O
ATOM 4 OP2 C B 33 27.158 89.134 63.446 1.00103.02 O
ATOM 5 O5' C B 33 27.692 90.184 61.256 1.00103.66 O
ATOM 6 C5' C B 33 27.402 90.622 59.936 1.00104.98 C
ATOM 7 C4' C B 33 28.666 90.773 59.139 1.00105.95 C
ATOM 8 O4' C B 33 29.412 91.916 59.604 1.00106.57 O
ATOM 9 C3' C B 33 29.664 89.632 59.216 1.00106.75 C
ATOM 10 O3' C B 33 29.354 88.570 58.352 1.00108.03 O
ATOM 11 C2' C B 33 30.946 90.294 58.761 1.00106.94 C
ATOM 12 O2' C B 33 31.026 90.356 57.351 1.00107.49 O
ATOM 13 C1' C B 33 30.776 91.691 59.350 1.00107.02 C
ATOM 14 N1 C B 33 31.534 91.797 60.586 1.00106.90 N
ATOM 15 C2 C B 33 32.846 92.052 60.428 1.00106.39 C
ATOM 16 O2 C B 33 33.248 92.179 59.251 1.00106.04 O
ATOM 17 N3 C B 33 33.653 92.158 61.518 1.00106.23 N
ATOM 18 C4 C B 33 33.128 92.001 62.747 1.00106.28 C
ATOM 19 N4 C B 33 33.931 92.106 63.825 1.00105.88 N
ATOM 20 C5 C B 33 31.750 91.731 62.937 1.00106.30 C
ATOM 21 C6 C B 33 30.992 91.638 61.838 1.00106.87 C
ATOM 22 P G B 34 30.205 87.216 58.449 1.00109.58 P
ATOM 23 OP1 G B 34 29.612 86.250 57.490 1.00110.03 O
ATOM 24 OP2 G B 34 30.313 86.861 59.889 1.00108.92 O
ATOM 25 O5' G B 34 31.653 87.622 57.924 1.00109.72 O
TER
Atoms:
OP1: (40.263,100.623,57.455)
OP2: (40.028,99.628,59.811)
C3': (35.845,99.082,57.136)
C1': (35.125,96.845,57.387)
C5': (38.276,98.476,56.607)
O6: (33.972,95.379,63.091)
O4': (36.475,96.843,56.927)
C8: (36.124,96.823,59.715)
C2: (32.116,95.136,60.010)
C6: (33.714,95.484,61.870)
C5: (34.544,95.989,60.858)
C4: (34.087,96.007,59.549)
P: (39.973,99.461,58.335)
C4': (36.812,98.164,56.418)
C2': (34.569,98.250,57.156)
O2': (33.858,98.304,55.932)
N1: (32.480,95.073,61.354)
N2: (30.887,94.698,59.668)
N3: (32.906,95.601,59.062)
N7: (35.821,96.503,60.943)
N9: (35.117,96.559,58.824)
O5': (38.534,98.903,57.942)
O3': (35.694,100.340,56.508)
OP2: (40.028,99.628,59.811)
C3': (35.845,99.082,57.136)
C1': (35.125,96.845,57.387)
C5': (38.276,98.476,56.607)
O6: (33.972,95.379,63.091)
O4': (36.475,96.843,56.927)
C8: (36.124,96.823,59.715)
C2: (32.116,95.136,60.010)
C6: (33.714,95.484,61.870)
C5: (34.544,95.989,60.858)
C4: (34.087,96.007,59.549)
P: (39.973,99.461,58.335)
C4': (36.812,98.164,56.418)
C2': (34.569,98.250,57.156)
O2': (33.858,98.304,55.932)
N1: (32.480,95.073,61.354)
N2: (30.887,94.698,59.668)
N3: (32.906,95.601,59.062)
N7: (35.821,96.503,60.943)
N9: (35.117,96.559,58.824)
O5': (38.534,98.903,57.942)
O3': (35.694,100.340,56.508)
C2: (32.846,92.052,60.428)
OP1: (25.584,88.837,61.438)
OP2: (27.158,89.134,63.446)
C4: (33.128,92.001,62.747)
O5': (27.692,90.184,61.256)
C3': (29.664,89.632,59.216)
C1': (30.776,91.691,59.350)
O4': (29.412,91.916,59.604)
C5': (27.402,90.622,59.936)
P: (26.521,89.681,62.217)
O2: (33.248,92.179,59.251)
C4': (28.666,90.773,59.139)
C2': (30.946,90.294,58.761)
O2': (31.026,90.356,57.351)
N1: (31.534,91.797,60.586)
N3: (33.653,92.158,61.518)
N4: (33.931,92.106,63.825)
C6: (30.992,91.638,61.838)
C5: (31.750,91.731,62.937)
O3': (29.354,88.570,58.352)
OP1: (25.584,88.837,61.438)
OP2: (27.158,89.134,63.446)
C4: (33.128,92.001,62.747)
O5': (27.692,90.184,61.256)
C3': (29.664,89.632,59.216)
C1': (30.776,91.691,59.350)
O4': (29.412,91.916,59.604)
C5': (27.402,90.622,59.936)
P: (26.521,89.681,62.217)
O2: (33.248,92.179,59.251)
C4': (28.666,90.773,59.139)
C2': (30.946,90.294,58.761)
O2': (31.026,90.356,57.351)
N1: (31.534,91.797,60.586)
N3: (33.653,92.158,61.518)
N4: (33.931,92.106,63.825)
C6: (30.992,91.638,61.838)
C5: (31.750,91.731,62.937)
O3': (29.354,88.570,58.352)
Image (generated by PyMOL):