ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1FJG:A1061:A1049

Extra

PDB:
ATOM 1 O3' U A1060 181.590 137.855 -14.378 1.00 53.17 O
ATOM 2 P G A1061 183.167 138.171 -14.372 1.00 55.49 P
ATOM 3 OP1 G A1061 183.343 138.930 -15.639 1.00 54.88 O
ATOM 4 OP2 G A1061 183.952 136.929 -14.131 1.00 54.88 O
ATOM 5 O5' G A1061 183.388 139.153 -13.138 1.00 55.49 O
ATOM 6 C5' G A1061 182.852 140.486 -13.162 1.00 55.49 C
ATOM 7 C4' G A1061 182.797 141.051 -11.767 1.00 55.49 C
ATOM 8 O4' G A1061 181.961 140.213 -10.935 1.00 55.49 O
ATOM 9 C3' G A1061 184.117 141.122 -11.030 1.00 55.49 C
ATOM 10 O3' G A1061 184.809 142.309 -11.386 1.00 55.49 O
ATOM 11 C2' G A1061 183.683 141.114 -9.566 1.00 55.49 C
ATOM 12 O2' G A1061 183.312 142.390 -9.069 1.00 55.49 O
ATOM 13 C1' G A1061 182.448 140.217 -9.611 1.00 55.49 C
ATOM 14 N9 G A1061 182.741 138.844 -9.230 1.00 54.88 N
ATOM 15 C8 G A1061 183.319 137.879 -10.015 1.00 54.88 C
ATOM 16 N7 G A1061 183.491 136.748 -9.388 1.00 54.88 N
ATOM 17 C5 G A1061 182.996 136.979 -8.116 1.00 54.88 C
ATOM 18 C6 G A1061 182.940 136.130 -6.999 1.00 54.88 C
ATOM 19 O6 G A1061 183.366 134.972 -6.888 1.00 54.88 O
ATOM 20 N1 G A1061 182.335 136.751 -5.917 1.00 54.88 N
ATOM 21 C2 G A1061 181.864 138.035 -5.907 1.00 54.88 C
ATOM 22 N2 G A1061 181.302 138.444 -4.764 1.00 54.88 N
ATOM 23 N3 G A1061 181.935 138.851 -6.938 1.00 54.88 N
ATOM 24 C4 G A1061 182.510 138.260 -8.005 1.00 54.88 C
ATOM 25 P U A1062 186.368 142.461 -11.037 1.00 64.46 P
ATOM 26 OP1 U A1062 186.616 141.978 -9.651 1.00 62.84 O
ATOM 27 OP2 U A1062 186.738 143.851 -11.410 1.00 62.84 O
ATOM 28 O5' U A1062 187.073 141.466 -12.058 1.00 64.46 O
TER

ATOM 1 O3' C B1048 181.628 136.036 2.542 1.00 51.27 O
ATOM 2 P G B1049 180.072 135.846 2.211 1.00 57.44 P
ATOM 3 OP1 G B1049 179.548 135.069 3.378 1.00 40.52 O
ATOM 4 OP2 G B1049 179.861 135.318 0.845 1.00 40.52 O
ATOM 5 O5' G B1049 179.532 137.346 2.183 1.00 57.44 O
ATOM 6 C5' G B1049 179.497 138.149 3.373 1.00 57.44 C
ATOM 7 C4' G B1049 179.004 139.538 3.050 1.00 57.44 C
ATOM 8 O4' G B1049 179.998 140.242 2.264 1.00 57.44 O
ATOM 9 C3' G B1049 177.748 139.604 2.204 1.00 57.44 C
ATOM 10 O3' G B1049 176.564 139.449 2.964 1.00 57.44 O
ATOM 11 C2' G B1049 177.844 140.971 1.543 1.00 57.44 C
ATOM 12 O2' G B1049 177.340 142.015 2.338 1.00 57.44 O
ATOM 13 C1' G B1049 179.354 141.131 1.366 1.00 57.44 C
ATOM 14 N9 G B1049 179.789 140.830 0.004 1.00 40.52 N
ATOM 15 C8 G B1049 180.232 139.622 -0.486 1.00 40.52 C
ATOM 16 N7 G B1049 180.545 139.668 -1.752 1.00 40.52 N
ATOM 17 C5 G B1049 180.298 140.983 -2.120 1.00 40.52 C
ATOM 18 C6 G B1049 180.448 141.628 -3.374 1.00 40.52 C
ATOM 19 O6 G B1049 180.849 141.154 -4.440 1.00 40.52 O
ATOM 20 N1 G B1049 180.073 142.967 -3.308 1.00 40.52 N
ATOM 21 C2 G B1049 179.609 143.599 -2.185 1.00 40.52 C
ATOM 22 N2 G B1049 179.303 144.890 -2.326 1.00 40.52 N
ATOM 23 N3 G B1049 179.459 143.007 -1.010 1.00 40.52 N
ATOM 24 C4 G B1049 179.824 141.711 -1.050 1.00 40.52 C
ATOM 25 P U B1050 175.331 138.626 2.336 1.00 41.51 P
ATOM 26 OP1 U B1050 174.399 138.260 3.450 1.00 45.70 O
ATOM 27 OP2 U B1050 175.904 137.547 1.491 1.00 45.70 O
ATOM 28 O5' U B1050 174.654 139.681 1.345 1.00 41.51 O
TER

Atoms:
OP1: (183.343,138.930,-15.639)
OP2: (183.952,136.929,-14.131)
C3': (184.117,141.122,-11.030)
C1': (182.448,140.217,-9.611)
C5': (182.852,140.486,-13.162)
O6: (183.366,134.972,-6.888)
O4': (181.961,140.213,-10.935)
C8: (183.319,137.879,-10.015)
C2: (181.864,138.035,-5.907)
C6: (182.940,136.130,-6.999)
C5: (182.996,136.979,-8.116)
C4: (182.510,138.260,-8.005)
P: (183.167,138.171,-14.372)
C4': (182.797,141.051,-11.767)
C2': (183.683,141.114,-9.566)
O2': (183.312,142.390,-9.069)
N1: (182.335,136.751,-5.917)
N2: (181.302,138.444,-4.764)
N3: (181.935,138.851,-6.938)
N7: (183.491,136.748,-9.388)
N9: (182.741,138.844,-9.230)
O5': (183.388,139.153,-13.138)
O3': (184.809,142.309,-11.386)
OP1: (179.548,135.069,3.378)
OP2: (179.861,135.318,0.845)
C3': (177.748,139.604,2.204)
C1': (179.354,141.131,1.366)
C5': (179.497,138.149,3.373)
O6: (180.849,141.154,-4.440)
O4': (179.998,140.242,2.264)
C8: (180.232,139.622,-0.486)
C2: (179.609,143.599,-2.185)
C6: (180.448,141.628,-3.374)
C5: (180.298,140.983,-2.120)
C4: (179.824,141.711,-1.050)
P: (180.072,135.846,2.211)
C4': (179.004,139.538,3.050)
C2': (177.844,140.971,1.543)
O2': (177.340,142.015,2.338)
N1: (180.073,142.967,-3.308)
N2: (179.303,144.890,-2.326)
N3: (179.459,143.007,-1.010)
N7: (180.545,139.668,-1.752)
N9: (179.789,140.830,0.004)
O5': (179.532,137.346,2.183)
O3': (176.564,139.449,2.964)
Image (generated by PyMOL):
PyMOL image
show in jmol