Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:912:99
Extra
PDB:
ATOM 1 O3' C A 11 52.994 37.101 111.240 1.00 62.76 O
ATOM 2 P A A 12 54.449 36.706 111.772 1.00 64.65 P
ATOM 3 OP1 A A 12 54.301 35.724 112.871 1.00 65.64 O
ATOM 4 OP2 A A 12 55.199 37.962 112.021 1.00 66.21 O
ATOM 5 O5' A A 12 55.088 35.979 110.511 1.00 62.68 O
ATOM 6 C5' A A 12 54.844 34.591 110.264 1.00 58.67 C
ATOM 7 C4' A A 12 55.553 34.164 109.009 1.00 57.60 C
ATOM 8 O4' A A 12 54.789 34.590 107.849 1.00 57.04 O
ATOM 9 C3' A A 12 56.953 34.742 108.834 1.00 57.39 C
ATOM 10 O3' A A 12 57.785 33.780 108.192 1.00 56.62 O
ATOM 11 C2' A A 12 56.688 35.929 107.909 1.00 57.56 C
ATOM 12 O2' A A 12 57.791 36.360 107.145 1.00 59.67 O
ATOM 13 C1' A A 12 55.620 35.344 106.995 1.00 57.48 C
ATOM 14 N9 A A 12 54.815 36.346 106.297 1.00 57.67 N
ATOM 15 C8 A A 12 53.757 37.089 106.766 1.00 57.77 C
ATOM 16 N7 A A 12 53.261 37.920 105.881 1.00 56.00 N
ATOM 17 C5 A A 12 54.039 37.706 104.754 1.00 56.41 C
ATOM 18 C6 A A 12 54.019 38.279 103.479 1.00 56.75 C
ATOM 19 N6 A A 12 53.152 39.223 103.114 1.00 57.15 N
ATOM 20 N1 A A 12 54.931 37.846 102.578 1.00 57.15 N
ATOM 21 C2 A A 12 55.801 36.897 102.953 1.00 57.31 C
ATOM 22 N3 A A 12 55.918 36.279 104.127 1.00 56.57 N
ATOM 23 C4 A A 12 54.997 36.737 104.993 1.00 56.83 C
ATOM 24 P G A 13 59.092 33.219 108.944 1.00 56.36 P
ATOM 25 OP1 G A 13 59.512 32.025 108.182 1.00 58.02 O
ATOM 26 OP2 G A 13 58.823 33.103 110.397 1.00 55.41 O
ATOM 27 O5' G A 13 60.201 34.349 108.738 1.00 59.35 O
TER
ATOM 1 O3' C B 8 51.757 42.325 98.361 1.00 50.30 O
ATOM 2 P C B 9 53.096 43.217 98.428 1.00 51.57 P
ATOM 3 OP1 C B 9 52.720 44.501 99.064 1.00 52.79 O
ATOM 4 OP2 C B 9 53.737 43.223 97.091 1.00 52.26 O
ATOM 5 O5' C B 9 54.072 42.445 99.423 1.00 51.72 O
ATOM 6 C5' C B 9 53.720 42.239 100.803 1.00 51.48 C
ATOM 7 C4' C B 9 54.754 41.372 101.495 1.00 51.14 C
ATOM 8 O4' C B 9 54.886 40.113 100.775 1.00 51.12 O
ATOM 9 C3' C B 9 56.168 41.934 101.624 1.00 49.64 C
ATOM 10 O3' C B 9 56.747 41.439 102.818 1.00 50.21 O
ATOM 11 C2' C B 9 56.892 41.286 100.456 1.00 49.47 C
ATOM 12 O2' C B 9 58.274 41.162 100.705 1.00 49.24 O
ATOM 13 C1' C B 9 56.238 39.907 100.428 1.00 50.08 C
ATOM 14 N1 C B 9 56.289 39.258 99.110 1.00 50.11 N
ATOM 15 C2 C B 9 57.098 38.123 98.941 1.00 51.03 C
ATOM 16 O2 C B 9 57.709 37.660 99.920 1.00 51.89 O
ATOM 17 N3 C B 9 57.187 37.557 97.719 1.00 51.03 N
ATOM 18 C4 C B 9 56.495 38.066 96.697 1.00 51.30 C
ATOM 19 N4 C B 9 56.624 37.484 95.503 1.00 53.01 N
ATOM 20 C5 C B 9 55.643 39.198 96.850 1.00 51.19 C
ATOM 21 C6 C B 9 55.571 39.756 98.059 1.00 49.67 C
ATOM 22 P A B 10 56.917 42.404 104.081 1.00 51.84 P
ATOM 23 OP1 A B 10 55.642 43.122 104.319 1.00 51.63 O
ATOM 24 OP2 A B 10 58.161 43.171 103.861 1.00 51.68 O
ATOM 25 O5' A B 10 57.149 41.400 105.295 1.00 53.06 O
TER
ATOM 2 P A A 12 54.449 36.706 111.772 1.00 64.65 P
ATOM 3 OP1 A A 12 54.301 35.724 112.871 1.00 65.64 O
ATOM 4 OP2 A A 12 55.199 37.962 112.021 1.00 66.21 O
ATOM 5 O5' A A 12 55.088 35.979 110.511 1.00 62.68 O
ATOM 6 C5' A A 12 54.844 34.591 110.264 1.00 58.67 C
ATOM 7 C4' A A 12 55.553 34.164 109.009 1.00 57.60 C
ATOM 8 O4' A A 12 54.789 34.590 107.849 1.00 57.04 O
ATOM 9 C3' A A 12 56.953 34.742 108.834 1.00 57.39 C
ATOM 10 O3' A A 12 57.785 33.780 108.192 1.00 56.62 O
ATOM 11 C2' A A 12 56.688 35.929 107.909 1.00 57.56 C
ATOM 12 O2' A A 12 57.791 36.360 107.145 1.00 59.67 O
ATOM 13 C1' A A 12 55.620 35.344 106.995 1.00 57.48 C
ATOM 14 N9 A A 12 54.815 36.346 106.297 1.00 57.67 N
ATOM 15 C8 A A 12 53.757 37.089 106.766 1.00 57.77 C
ATOM 16 N7 A A 12 53.261 37.920 105.881 1.00 56.00 N
ATOM 17 C5 A A 12 54.039 37.706 104.754 1.00 56.41 C
ATOM 18 C6 A A 12 54.019 38.279 103.479 1.00 56.75 C
ATOM 19 N6 A A 12 53.152 39.223 103.114 1.00 57.15 N
ATOM 20 N1 A A 12 54.931 37.846 102.578 1.00 57.15 N
ATOM 21 C2 A A 12 55.801 36.897 102.953 1.00 57.31 C
ATOM 22 N3 A A 12 55.918 36.279 104.127 1.00 56.57 N
ATOM 23 C4 A A 12 54.997 36.737 104.993 1.00 56.83 C
ATOM 24 P G A 13 59.092 33.219 108.944 1.00 56.36 P
ATOM 25 OP1 G A 13 59.512 32.025 108.182 1.00 58.02 O
ATOM 26 OP2 G A 13 58.823 33.103 110.397 1.00 55.41 O
ATOM 27 O5' G A 13 60.201 34.349 108.738 1.00 59.35 O
TER
ATOM 1 O3' C B 8 51.757 42.325 98.361 1.00 50.30 O
ATOM 2 P C B 9 53.096 43.217 98.428 1.00 51.57 P
ATOM 3 OP1 C B 9 52.720 44.501 99.064 1.00 52.79 O
ATOM 4 OP2 C B 9 53.737 43.223 97.091 1.00 52.26 O
ATOM 5 O5' C B 9 54.072 42.445 99.423 1.00 51.72 O
ATOM 6 C5' C B 9 53.720 42.239 100.803 1.00 51.48 C
ATOM 7 C4' C B 9 54.754 41.372 101.495 1.00 51.14 C
ATOM 8 O4' C B 9 54.886 40.113 100.775 1.00 51.12 O
ATOM 9 C3' C B 9 56.168 41.934 101.624 1.00 49.64 C
ATOM 10 O3' C B 9 56.747 41.439 102.818 1.00 50.21 O
ATOM 11 C2' C B 9 56.892 41.286 100.456 1.00 49.47 C
ATOM 12 O2' C B 9 58.274 41.162 100.705 1.00 49.24 O
ATOM 13 C1' C B 9 56.238 39.907 100.428 1.00 50.08 C
ATOM 14 N1 C B 9 56.289 39.258 99.110 1.00 50.11 N
ATOM 15 C2 C B 9 57.098 38.123 98.941 1.00 51.03 C
ATOM 16 O2 C B 9 57.709 37.660 99.920 1.00 51.89 O
ATOM 17 N3 C B 9 57.187 37.557 97.719 1.00 51.03 N
ATOM 18 C4 C B 9 56.495 38.066 96.697 1.00 51.30 C
ATOM 19 N4 C B 9 56.624 37.484 95.503 1.00 53.01 N
ATOM 20 C5 C B 9 55.643 39.198 96.850 1.00 51.19 C
ATOM 21 C6 C B 9 55.571 39.756 98.059 1.00 49.67 C
ATOM 22 P A B 10 56.917 42.404 104.081 1.00 51.84 P
ATOM 23 OP1 A B 10 55.642 43.122 104.319 1.00 51.63 O
ATOM 24 OP2 A B 10 58.161 43.171 103.861 1.00 51.68 O
ATOM 25 O5' A B 10 57.149 41.400 105.295 1.00 53.06 O
TER
Atoms:
OP1: (54.301,35.724,112.871)
OP2: (55.199,37.962,112.021)
C3': (56.953,34.742,108.834)
C1': (55.620,35.344,106.995)
C5': (54.844,34.591,110.264)
O4': (54.789,34.590,107.849)
C8: (53.757,37.089,106.766)
O2': (57.791,36.360,107.145)
C6: (54.019,38.279,103.479)
C5: (54.039,37.706,104.754)
C4: (54.997,36.737,104.993)
P: (54.449,36.706,111.772)
C4': (55.553,34.164,109.009)
C2': (56.688,35.929,107.909)
C2: (55.801,36.897,102.953)
N1: (54.931,37.846,102.578)
N3: (55.918,36.279,104.127)
N6: (53.152,39.223,103.114)
N7: (53.261,37.920,105.881)
N9: (54.815,36.346,106.297)
O5': (55.088,35.979,110.511)
O3': (57.785,33.780,108.192)
OP2: (55.199,37.962,112.021)
C3': (56.953,34.742,108.834)
C1': (55.620,35.344,106.995)
C5': (54.844,34.591,110.264)
O4': (54.789,34.590,107.849)
C8: (53.757,37.089,106.766)
O2': (57.791,36.360,107.145)
C6: (54.019,38.279,103.479)
C5: (54.039,37.706,104.754)
C4: (54.997,36.737,104.993)
P: (54.449,36.706,111.772)
C4': (55.553,34.164,109.009)
C2': (56.688,35.929,107.909)
C2: (55.801,36.897,102.953)
N1: (54.931,37.846,102.578)
N3: (55.918,36.279,104.127)
N6: (53.152,39.223,103.114)
N7: (53.261,37.920,105.881)
N9: (54.815,36.346,106.297)
O5': (55.088,35.979,110.511)
O3': (57.785,33.780,108.192)
C2: (57.098,38.123,98.941)
OP1: (52.720,44.501,99.064)
OP2: (53.737,43.223,97.091)
C4: (56.495,38.066,96.697)
O5': (54.072,42.445,99.423)
C3': (56.168,41.934,101.624)
C1': (56.238,39.907,100.428)
O4': (54.886,40.113,100.775)
C5': (53.720,42.239,100.803)
P: (53.096,43.217,98.428)
O2: (57.709,37.660,99.920)
C4': (54.754,41.372,101.495)
C2': (56.892,41.286,100.456)
O2': (58.274,41.162,100.705)
N1: (56.289,39.258,99.110)
N3: (57.187,37.557,97.719)
N4: (56.624,37.484,95.503)
C6: (55.571,39.756,98.059)
C5: (55.643,39.198,96.850)
O3': (56.747,41.439,102.818)
OP1: (52.720,44.501,99.064)
OP2: (53.737,43.223,97.091)
C4: (56.495,38.066,96.697)
O5': (54.072,42.445,99.423)
C3': (56.168,41.934,101.624)
C1': (56.238,39.907,100.428)
O4': (54.886,40.113,100.775)
C5': (53.720,42.239,100.803)
P: (53.096,43.217,98.428)
O2: (57.709,37.660,99.920)
C4': (54.754,41.372,101.495)
C2': (56.892,41.286,100.456)
O2': (58.274,41.162,100.705)
N1: (56.289,39.258,99.110)
N3: (57.187,37.557,97.719)
N4: (56.624,37.484,95.503)
C6: (55.571,39.756,98.059)
C5: (55.643,39.198,96.850)
O3': (56.747,41.439,102.818)
Image (generated by PyMOL):