Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0694:0709
Extra
PDB:
ATOM 1 O3' C A 693 27.419 56.426 64.923 1.00 57.15 O
ATOM 2 P G A 694 25.834 56.396 64.695 1.00 55.71 P
ATOM 3 OP1 G A 694 25.193 55.918 65.950 1.00 55.83 O
ATOM 4 OP2 G A 694 25.553 55.704 63.412 1.00 53.95 O
ATOM 5 O5' G A 694 25.482 57.937 64.519 1.00 55.14 O
ATOM 6 C5' G A 694 26.062 58.921 65.398 1.00 50.65 C
ATOM 7 C4' G A 694 26.165 60.252 64.699 1.00 49.20 C
ATOM 8 O4' G A 694 27.116 60.179 63.605 1.00 48.27 O
ATOM 9 C3' G A 694 24.892 60.753 64.045 1.00 46.58 C
ATOM 10 O3' G A 694 24.035 61.337 65.009 1.00 44.84 O
ATOM 11 C2' G A 694 25.436 61.761 63.047 1.00 48.46 C
ATOM 12 O2' G A 694 25.791 62.980 63.667 1.00 50.57 O
ATOM 13 C1' G A 694 26.702 61.047 62.566 1.00 50.14 C
ATOM 14 N9 G A 694 26.480 60.253 61.360 1.00 53.69 N
ATOM 15 C8 G A 694 26.194 58.910 61.286 1.00 54.38 C
ATOM 16 N7 G A 694 26.041 58.485 60.062 1.00 55.33 N
ATOM 17 C5 G A 694 26.241 59.612 59.278 1.00 56.79 C
ATOM 18 C6 G A 694 26.204 59.770 57.867 1.00 58.18 C
ATOM 19 O6 G A 694 25.968 58.917 57.001 1.00 58.70 O
ATOM 20 N1 G A 694 26.475 61.083 57.492 1.00 58.64 N
ATOM 21 C2 G A 694 26.743 62.115 58.359 1.00 58.63 C
ATOM 22 N2 G A 694 26.993 63.311 57.801 1.00 58.21 N
ATOM 23 N3 G A 694 26.768 61.984 59.677 1.00 57.33 N
ATOM 24 C4 G A 694 26.513 60.713 60.064 1.00 56.00 C
ATOM 25 P C A 695 22.617 61.941 64.563 1.00 45.99 P
ATOM 26 OP1 C A 695 21.713 61.800 65.731 1.00 45.18 O
ATOM 27 OP2 C A 695 22.218 61.385 63.247 1.00 43.96 O
ATOM 28 O5' C A 695 22.908 63.494 64.373 1.00 48.61 O
TER
ATOM 1 O3' A B 708 28.499 66.321 51.108 1.00 48.58 O
ATOM 2 P G B 709 29.892 66.184 51.886 1.00 48.75 P
ATOM 3 OP1 G B 709 30.991 66.515 50.950 1.00 50.24 O
ATOM 4 OP2 G B 709 29.905 64.874 52.581 1.00 50.16 O
ATOM 5 O5' G B 709 29.803 67.350 52.969 1.00 49.65 O
ATOM 6 C5' G B 709 29.745 68.725 52.547 1.00 47.31 C
ATOM 7 C4' G B 709 29.427 69.634 53.709 1.00 46.69 C
ATOM 8 O4' G B 709 28.098 69.342 54.220 1.00 47.24 O
ATOM 9 C3' G B 709 30.309 69.518 54.940 1.00 45.16 C
ATOM 10 O3' G B 709 31.553 70.182 54.796 1.00 43.63 O
ATOM 11 C2' G B 709 29.434 70.172 55.996 1.00 46.10 C
ATOM 12 O2' G B 709 29.414 71.583 55.928 1.00 45.92 O
ATOM 13 C1' G B 709 28.060 69.619 55.613 1.00 47.64 C
ATOM 14 N9 G B 709 27.840 68.372 56.336 1.00 49.10 N
ATOM 15 C8 G B 709 27.840 67.093 55.836 1.00 50.12 C
ATOM 16 N7 G B 709 27.704 66.184 56.761 1.00 51.77 N
ATOM 17 C5 G B 709 27.586 66.910 57.938 1.00 50.78 C
ATOM 18 C6 G B 709 27.433 66.472 59.271 1.00 50.89 C
ATOM 19 O6 G B 709 27.361 65.319 59.695 1.00 52.20 O
ATOM 20 N1 G B 709 27.364 67.543 60.156 1.00 52.03 N
ATOM 21 C2 G B 709 27.428 68.869 59.800 1.00 50.92 C
ATOM 22 N2 G B 709 27.339 69.762 60.795 1.00 48.05 N
ATOM 23 N3 G B 709 27.569 69.287 58.559 1.00 50.04 N
ATOM 24 C4 G B 709 27.645 68.261 57.687 1.00 49.96 C
ATOM 25 P G B 710 32.910 69.403 55.156 1.00 45.08 P
ATOM 26 OP1 G B 710 34.035 70.342 54.949 1.00 47.60 O
ATOM 27 OP2 G B 710 32.908 68.100 54.447 1.00 45.20 O
ATOM 28 O5' G B 710 32.796 69.120 56.716 1.00 45.99 O
TER
ATOM 2 P G A 694 25.834 56.396 64.695 1.00 55.71 P
ATOM 3 OP1 G A 694 25.193 55.918 65.950 1.00 55.83 O
ATOM 4 OP2 G A 694 25.553 55.704 63.412 1.00 53.95 O
ATOM 5 O5' G A 694 25.482 57.937 64.519 1.00 55.14 O
ATOM 6 C5' G A 694 26.062 58.921 65.398 1.00 50.65 C
ATOM 7 C4' G A 694 26.165 60.252 64.699 1.00 49.20 C
ATOM 8 O4' G A 694 27.116 60.179 63.605 1.00 48.27 O
ATOM 9 C3' G A 694 24.892 60.753 64.045 1.00 46.58 C
ATOM 10 O3' G A 694 24.035 61.337 65.009 1.00 44.84 O
ATOM 11 C2' G A 694 25.436 61.761 63.047 1.00 48.46 C
ATOM 12 O2' G A 694 25.791 62.980 63.667 1.00 50.57 O
ATOM 13 C1' G A 694 26.702 61.047 62.566 1.00 50.14 C
ATOM 14 N9 G A 694 26.480 60.253 61.360 1.00 53.69 N
ATOM 15 C8 G A 694 26.194 58.910 61.286 1.00 54.38 C
ATOM 16 N7 G A 694 26.041 58.485 60.062 1.00 55.33 N
ATOM 17 C5 G A 694 26.241 59.612 59.278 1.00 56.79 C
ATOM 18 C6 G A 694 26.204 59.770 57.867 1.00 58.18 C
ATOM 19 O6 G A 694 25.968 58.917 57.001 1.00 58.70 O
ATOM 20 N1 G A 694 26.475 61.083 57.492 1.00 58.64 N
ATOM 21 C2 G A 694 26.743 62.115 58.359 1.00 58.63 C
ATOM 22 N2 G A 694 26.993 63.311 57.801 1.00 58.21 N
ATOM 23 N3 G A 694 26.768 61.984 59.677 1.00 57.33 N
ATOM 24 C4 G A 694 26.513 60.713 60.064 1.00 56.00 C
ATOM 25 P C A 695 22.617 61.941 64.563 1.00 45.99 P
ATOM 26 OP1 C A 695 21.713 61.800 65.731 1.00 45.18 O
ATOM 27 OP2 C A 695 22.218 61.385 63.247 1.00 43.96 O
ATOM 28 O5' C A 695 22.908 63.494 64.373 1.00 48.61 O
TER
ATOM 1 O3' A B 708 28.499 66.321 51.108 1.00 48.58 O
ATOM 2 P G B 709 29.892 66.184 51.886 1.00 48.75 P
ATOM 3 OP1 G B 709 30.991 66.515 50.950 1.00 50.24 O
ATOM 4 OP2 G B 709 29.905 64.874 52.581 1.00 50.16 O
ATOM 5 O5' G B 709 29.803 67.350 52.969 1.00 49.65 O
ATOM 6 C5' G B 709 29.745 68.725 52.547 1.00 47.31 C
ATOM 7 C4' G B 709 29.427 69.634 53.709 1.00 46.69 C
ATOM 8 O4' G B 709 28.098 69.342 54.220 1.00 47.24 O
ATOM 9 C3' G B 709 30.309 69.518 54.940 1.00 45.16 C
ATOM 10 O3' G B 709 31.553 70.182 54.796 1.00 43.63 O
ATOM 11 C2' G B 709 29.434 70.172 55.996 1.00 46.10 C
ATOM 12 O2' G B 709 29.414 71.583 55.928 1.00 45.92 O
ATOM 13 C1' G B 709 28.060 69.619 55.613 1.00 47.64 C
ATOM 14 N9 G B 709 27.840 68.372 56.336 1.00 49.10 N
ATOM 15 C8 G B 709 27.840 67.093 55.836 1.00 50.12 C
ATOM 16 N7 G B 709 27.704 66.184 56.761 1.00 51.77 N
ATOM 17 C5 G B 709 27.586 66.910 57.938 1.00 50.78 C
ATOM 18 C6 G B 709 27.433 66.472 59.271 1.00 50.89 C
ATOM 19 O6 G B 709 27.361 65.319 59.695 1.00 52.20 O
ATOM 20 N1 G B 709 27.364 67.543 60.156 1.00 52.03 N
ATOM 21 C2 G B 709 27.428 68.869 59.800 1.00 50.92 C
ATOM 22 N2 G B 709 27.339 69.762 60.795 1.00 48.05 N
ATOM 23 N3 G B 709 27.569 69.287 58.559 1.00 50.04 N
ATOM 24 C4 G B 709 27.645 68.261 57.687 1.00 49.96 C
ATOM 25 P G B 710 32.910 69.403 55.156 1.00 45.08 P
ATOM 26 OP1 G B 710 34.035 70.342 54.949 1.00 47.60 O
ATOM 27 OP2 G B 710 32.908 68.100 54.447 1.00 45.20 O
ATOM 28 O5' G B 710 32.796 69.120 56.716 1.00 45.99 O
TER
Atoms:
OP1: (25.193,55.918,65.950)
OP2: (25.553,55.704,63.412)
C3': (24.892,60.753,64.045)
C1': (26.702,61.047,62.566)
C5': (26.062,58.921,65.398)
O6: (25.968,58.917,57.001)
O4': (27.116,60.179,63.605)
C8: (26.194,58.910,61.286)
C2: (26.743,62.115,58.359)
C6: (26.204,59.770,57.867)
C5: (26.241,59.612,59.278)
C4: (26.513,60.713,60.064)
P: (25.834,56.396,64.695)
C4': (26.165,60.252,64.699)
C2': (25.436,61.761,63.047)
O2': (25.791,62.980,63.667)
N1: (26.475,61.083,57.492)
N2: (26.993,63.311,57.801)
N3: (26.768,61.984,59.677)
N7: (26.041,58.485,60.062)
N9: (26.480,60.253,61.360)
O5': (25.482,57.937,64.519)
O3': (24.035,61.337,65.009)
OP2: (25.553,55.704,63.412)
C3': (24.892,60.753,64.045)
C1': (26.702,61.047,62.566)
C5': (26.062,58.921,65.398)
O6: (25.968,58.917,57.001)
O4': (27.116,60.179,63.605)
C8: (26.194,58.910,61.286)
C2: (26.743,62.115,58.359)
C6: (26.204,59.770,57.867)
C5: (26.241,59.612,59.278)
C4: (26.513,60.713,60.064)
P: (25.834,56.396,64.695)
C4': (26.165,60.252,64.699)
C2': (25.436,61.761,63.047)
O2': (25.791,62.980,63.667)
N1: (26.475,61.083,57.492)
N2: (26.993,63.311,57.801)
N3: (26.768,61.984,59.677)
N7: (26.041,58.485,60.062)
N9: (26.480,60.253,61.360)
O5': (25.482,57.937,64.519)
O3': (24.035,61.337,65.009)
OP1: (30.991,66.515,50.950)
OP2: (29.905,64.874,52.581)
C3': (30.309,69.518,54.940)
C1': (28.060,69.619,55.613)
C5': (29.745,68.725,52.547)
O6: (27.361,65.319,59.695)
O4': (28.098,69.342,54.220)
C8: (27.840,67.093,55.836)
C2: (27.428,68.869,59.800)
C6: (27.433,66.472,59.271)
C5: (27.586,66.910,57.938)
C4: (27.645,68.261,57.687)
P: (29.892,66.184,51.886)
C4': (29.427,69.634,53.709)
C2': (29.434,70.172,55.996)
O2': (29.414,71.583,55.928)
N1: (27.364,67.543,60.156)
N2: (27.339,69.762,60.795)
N3: (27.569,69.287,58.559)
N7: (27.704,66.184,56.761)
N9: (27.840,68.372,56.336)
O5': (29.803,67.350,52.969)
O3': (31.553,70.182,54.796)
OP2: (29.905,64.874,52.581)
C3': (30.309,69.518,54.940)
C1': (28.060,69.619,55.613)
C5': (29.745,68.725,52.547)
O6: (27.361,65.319,59.695)
O4': (28.098,69.342,54.220)
C8: (27.840,67.093,55.836)
C2: (27.428,68.869,59.800)
C6: (27.433,66.472,59.271)
C5: (27.586,66.910,57.938)
C4: (27.645,68.261,57.687)
P: (29.892,66.184,51.886)
C4': (29.427,69.634,53.709)
C2': (29.434,70.172,55.996)
O2': (29.414,71.583,55.928)
N1: (27.364,67.543,60.156)
N2: (27.339,69.762,60.795)
N3: (27.569,69.287,58.559)
N7: (27.704,66.184,56.761)
N9: (27.840,68.372,56.336)
O5': (29.803,67.350,52.969)
O3': (31.553,70.182,54.796)
Image (generated by PyMOL):