Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0694:0709
Extra
PDB:
ATOM 1 O3' C A 693 27.366 56.445 64.823 1.00 62.22 O
ATOM 2 P G A 694 25.777 56.493 64.662 1.00 61.27 P
ATOM 3 OP1 G A 694 25.174 56.061 65.949 1.00 61.19 O
ATOM 4 OP2 G A 694 25.400 55.804 63.396 1.00 60.01 O
ATOM 5 O5' G A 694 25.496 58.047 64.489 1.00 60.63 O
ATOM 6 C5' G A 694 26.134 59.008 65.351 1.00 57.14 C
ATOM 7 C4' G A 694 26.242 60.335 64.648 1.00 55.31 C
ATOM 8 O4' G A 694 27.182 60.233 63.548 1.00 54.47 O
ATOM 9 C3' G A 694 24.961 60.822 63.993 1.00 52.43 C
ATOM 10 O3' G A 694 24.096 61.440 64.928 1.00 50.92 O
ATOM 11 C2' G A 694 25.490 61.789 62.952 1.00 53.20 C
ATOM 12 O2' G A 694 25.860 63.026 63.523 1.00 52.37 O
ATOM 13 C1' G A 694 26.738 61.045 62.475 1.00 55.26 C
ATOM 14 N9 G A 694 26.460 60.185 61.329 1.00 57.71 N
ATOM 15 C8 G A 694 26.145 58.846 61.338 1.00 59.01 C
ATOM 16 N7 G A 694 25.935 58.360 60.145 1.00 59.61 N
ATOM 17 C5 G A 694 26.126 59.442 59.298 1.00 60.53 C
ATOM 18 C6 G A 694 26.029 59.532 57.887 1.00 61.74 C
ATOM 19 O6 G A 694 25.749 58.641 57.076 1.00 62.77 O
ATOM 20 N1 G A 694 26.299 60.824 57.438 1.00 62.44 N
ATOM 21 C2 G A 694 26.622 61.892 58.245 1.00 62.21 C
ATOM 22 N2 G A 694 26.864 63.059 57.628 1.00 61.82 N
ATOM 23 N3 G A 694 26.708 61.820 59.561 1.00 61.10 N
ATOM 24 C4 G A 694 26.452 60.575 60.016 1.00 59.81 C
ATOM 25 P C A 695 22.655 61.959 64.456 1.00 52.26 P
ATOM 26 OP1 C A 695 21.726 61.752 65.593 1.00 51.30 O
ATOM 27 OP2 C A 695 22.338 61.373 63.128 1.00 49.76 O
ATOM 28 O5' C A 695 22.858 63.529 64.272 1.00 53.37 O
TER
ATOM 1 O3' A B 708 28.428 66.237 51.026 1.00 52.33 O
ATOM 2 P G B 709 29.825 66.223 51.811 1.00 52.74 P
ATOM 3 OP1 G B 709 30.901 66.652 50.883 1.00 51.76 O
ATOM 4 OP2 G B 709 29.937 64.915 52.502 1.00 52.09 O
ATOM 5 O5' G B 709 29.641 67.381 52.892 1.00 53.19 O
ATOM 6 C5' G B 709 29.602 68.765 52.484 1.00 51.88 C
ATOM 7 C4' G B 709 29.341 69.673 53.668 1.00 51.23 C
ATOM 8 O4' G B 709 28.019 69.407 54.199 1.00 51.87 O
ATOM 9 C3' G B 709 30.243 69.526 54.884 1.00 50.76 C
ATOM 10 O3' G B 709 31.492 70.176 54.751 1.00 50.57 O
ATOM 11 C2' G B 709 29.399 70.173 55.966 1.00 51.60 C
ATOM 12 O2' G B 709 29.411 71.586 55.915 1.00 51.72 O
ATOM 13 C1' G B 709 28.017 69.629 55.603 1.00 52.45 C
ATOM 14 N9 G B 709 27.854 68.345 56.273 1.00 53.25 N
ATOM 15 C8 G B 709 27.924 67.087 55.718 1.00 54.04 C
ATOM 16 N7 G B 709 27.861 66.135 56.606 1.00 54.60 N
ATOM 17 C5 G B 709 27.717 66.805 57.815 1.00 53.97 C
ATOM 18 C6 G B 709 27.631 66.308 59.131 1.00 53.29 C
ATOM 19 O6 G B 709 27.683 65.137 59.513 1.00 52.72 O
ATOM 20 N1 G B 709 27.481 67.337 60.056 1.00 53.54 N
ATOM 21 C2 G B 709 27.430 68.675 59.750 1.00 52.78 C
ATOM 22 N2 G B 709 27.262 69.516 60.771 1.00 52.07 N
ATOM 23 N3 G B 709 27.532 69.150 58.529 1.00 52.55 N
ATOM 24 C4 G B 709 27.674 68.167 57.617 1.00 53.33 C
ATOM 25 P G B 710 32.836 69.372 55.092 1.00 51.11 P
ATOM 26 OP1 G B 710 33.963 70.296 54.848 1.00 53.24 O
ATOM 27 OP2 G B 710 32.797 68.063 54.394 1.00 51.02 O
ATOM 28 O5' G B 710 32.742 69.078 56.651 1.00 51.09 O
TER
ATOM 2 P G A 694 25.777 56.493 64.662 1.00 61.27 P
ATOM 3 OP1 G A 694 25.174 56.061 65.949 1.00 61.19 O
ATOM 4 OP2 G A 694 25.400 55.804 63.396 1.00 60.01 O
ATOM 5 O5' G A 694 25.496 58.047 64.489 1.00 60.63 O
ATOM 6 C5' G A 694 26.134 59.008 65.351 1.00 57.14 C
ATOM 7 C4' G A 694 26.242 60.335 64.648 1.00 55.31 C
ATOM 8 O4' G A 694 27.182 60.233 63.548 1.00 54.47 O
ATOM 9 C3' G A 694 24.961 60.822 63.993 1.00 52.43 C
ATOM 10 O3' G A 694 24.096 61.440 64.928 1.00 50.92 O
ATOM 11 C2' G A 694 25.490 61.789 62.952 1.00 53.20 C
ATOM 12 O2' G A 694 25.860 63.026 63.523 1.00 52.37 O
ATOM 13 C1' G A 694 26.738 61.045 62.475 1.00 55.26 C
ATOM 14 N9 G A 694 26.460 60.185 61.329 1.00 57.71 N
ATOM 15 C8 G A 694 26.145 58.846 61.338 1.00 59.01 C
ATOM 16 N7 G A 694 25.935 58.360 60.145 1.00 59.61 N
ATOM 17 C5 G A 694 26.126 59.442 59.298 1.00 60.53 C
ATOM 18 C6 G A 694 26.029 59.532 57.887 1.00 61.74 C
ATOM 19 O6 G A 694 25.749 58.641 57.076 1.00 62.77 O
ATOM 20 N1 G A 694 26.299 60.824 57.438 1.00 62.44 N
ATOM 21 C2 G A 694 26.622 61.892 58.245 1.00 62.21 C
ATOM 22 N2 G A 694 26.864 63.059 57.628 1.00 61.82 N
ATOM 23 N3 G A 694 26.708 61.820 59.561 1.00 61.10 N
ATOM 24 C4 G A 694 26.452 60.575 60.016 1.00 59.81 C
ATOM 25 P C A 695 22.655 61.959 64.456 1.00 52.26 P
ATOM 26 OP1 C A 695 21.726 61.752 65.593 1.00 51.30 O
ATOM 27 OP2 C A 695 22.338 61.373 63.128 1.00 49.76 O
ATOM 28 O5' C A 695 22.858 63.529 64.272 1.00 53.37 O
TER
ATOM 1 O3' A B 708 28.428 66.237 51.026 1.00 52.33 O
ATOM 2 P G B 709 29.825 66.223 51.811 1.00 52.74 P
ATOM 3 OP1 G B 709 30.901 66.652 50.883 1.00 51.76 O
ATOM 4 OP2 G B 709 29.937 64.915 52.502 1.00 52.09 O
ATOM 5 O5' G B 709 29.641 67.381 52.892 1.00 53.19 O
ATOM 6 C5' G B 709 29.602 68.765 52.484 1.00 51.88 C
ATOM 7 C4' G B 709 29.341 69.673 53.668 1.00 51.23 C
ATOM 8 O4' G B 709 28.019 69.407 54.199 1.00 51.87 O
ATOM 9 C3' G B 709 30.243 69.526 54.884 1.00 50.76 C
ATOM 10 O3' G B 709 31.492 70.176 54.751 1.00 50.57 O
ATOM 11 C2' G B 709 29.399 70.173 55.966 1.00 51.60 C
ATOM 12 O2' G B 709 29.411 71.586 55.915 1.00 51.72 O
ATOM 13 C1' G B 709 28.017 69.629 55.603 1.00 52.45 C
ATOM 14 N9 G B 709 27.854 68.345 56.273 1.00 53.25 N
ATOM 15 C8 G B 709 27.924 67.087 55.718 1.00 54.04 C
ATOM 16 N7 G B 709 27.861 66.135 56.606 1.00 54.60 N
ATOM 17 C5 G B 709 27.717 66.805 57.815 1.00 53.97 C
ATOM 18 C6 G B 709 27.631 66.308 59.131 1.00 53.29 C
ATOM 19 O6 G B 709 27.683 65.137 59.513 1.00 52.72 O
ATOM 20 N1 G B 709 27.481 67.337 60.056 1.00 53.54 N
ATOM 21 C2 G B 709 27.430 68.675 59.750 1.00 52.78 C
ATOM 22 N2 G B 709 27.262 69.516 60.771 1.00 52.07 N
ATOM 23 N3 G B 709 27.532 69.150 58.529 1.00 52.55 N
ATOM 24 C4 G B 709 27.674 68.167 57.617 1.00 53.33 C
ATOM 25 P G B 710 32.836 69.372 55.092 1.00 51.11 P
ATOM 26 OP1 G B 710 33.963 70.296 54.848 1.00 53.24 O
ATOM 27 OP2 G B 710 32.797 68.063 54.394 1.00 51.02 O
ATOM 28 O5' G B 710 32.742 69.078 56.651 1.00 51.09 O
TER
Atoms:
OP1: (25.174,56.061,65.949)
OP2: (25.400,55.804,63.396)
C3': (24.961,60.822,63.993)
C1': (26.738,61.045,62.475)
C5': (26.134,59.008,65.351)
O6: (25.749,58.641,57.076)
O4': (27.182,60.233,63.548)
C8: (26.145,58.846,61.338)
C2: (26.622,61.892,58.245)
C6: (26.029,59.532,57.887)
C5: (26.126,59.442,59.298)
C4: (26.452,60.575,60.016)
P: (25.777,56.493,64.662)
C4': (26.242,60.335,64.648)
C2': (25.490,61.789,62.952)
O2': (25.860,63.026,63.523)
N1: (26.299,60.824,57.438)
N2: (26.864,63.059,57.628)
N3: (26.708,61.820,59.561)
N7: (25.935,58.360,60.145)
N9: (26.460,60.185,61.329)
O5': (25.496,58.047,64.489)
O3': (24.096,61.440,64.928)
OP2: (25.400,55.804,63.396)
C3': (24.961,60.822,63.993)
C1': (26.738,61.045,62.475)
C5': (26.134,59.008,65.351)
O6: (25.749,58.641,57.076)
O4': (27.182,60.233,63.548)
C8: (26.145,58.846,61.338)
C2: (26.622,61.892,58.245)
C6: (26.029,59.532,57.887)
C5: (26.126,59.442,59.298)
C4: (26.452,60.575,60.016)
P: (25.777,56.493,64.662)
C4': (26.242,60.335,64.648)
C2': (25.490,61.789,62.952)
O2': (25.860,63.026,63.523)
N1: (26.299,60.824,57.438)
N2: (26.864,63.059,57.628)
N3: (26.708,61.820,59.561)
N7: (25.935,58.360,60.145)
N9: (26.460,60.185,61.329)
O5': (25.496,58.047,64.489)
O3': (24.096,61.440,64.928)
OP1: (30.901,66.652,50.883)
OP2: (29.937,64.915,52.502)
C3': (30.243,69.526,54.884)
C1': (28.017,69.629,55.603)
C5': (29.602,68.765,52.484)
O6: (27.683,65.137,59.513)
O4': (28.019,69.407,54.199)
C8: (27.924,67.087,55.718)
C2: (27.430,68.675,59.750)
C6: (27.631,66.308,59.131)
C5: (27.717,66.805,57.815)
C4: (27.674,68.167,57.617)
P: (29.825,66.223,51.811)
C4': (29.341,69.673,53.668)
C2': (29.399,70.173,55.966)
O2': (29.411,71.586,55.915)
N1: (27.481,67.337,60.056)
N2: (27.262,69.516,60.771)
N3: (27.532,69.150,58.529)
N7: (27.861,66.135,56.606)
N9: (27.854,68.345,56.273)
O5': (29.641,67.381,52.892)
O3': (31.492,70.176,54.751)
OP2: (29.937,64.915,52.502)
C3': (30.243,69.526,54.884)
C1': (28.017,69.629,55.603)
C5': (29.602,68.765,52.484)
O6: (27.683,65.137,59.513)
O4': (28.019,69.407,54.199)
C8: (27.924,67.087,55.718)
C2: (27.430,68.675,59.750)
C6: (27.631,66.308,59.131)
C5: (27.717,66.805,57.815)
C4: (27.674,68.167,57.617)
P: (29.825,66.223,51.811)
C4': (29.341,69.673,53.668)
C2': (29.399,70.173,55.966)
O2': (29.411,71.586,55.915)
N1: (27.481,67.337,60.056)
N2: (27.262,69.516,60.771)
N3: (27.532,69.150,58.529)
N7: (27.861,66.135,56.606)
N9: (27.854,68.345,56.273)
O5': (29.641,67.381,52.892)
O3': (31.492,70.176,54.751)
Image (generated by PyMOL):