ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQF:A730:A632

Extra

PDB:
ATOM 1 O3' U A 729 130.117 112.840 -58.669 1.00 78.97 O
ATOM 2 P G A 730 128.783 113.146 -57.835 1.00 77.34 P
ATOM 3 OP1 G A 730 127.872 111.986 -58.079 1.00 76.15 O
ATOM 4 OP2 G A 730 128.359 114.524 -58.188 1.00 77.84 O
ATOM 5 O5' G A 730 129.244 113.136 -56.307 1.00 75.10 O
ATOM 6 C5' G A 730 129.994 112.036 -55.761 1.00 72.42 C
ATOM 7 C4' G A 730 130.691 112.474 -54.507 1.00 70.62 C
ATOM 8 O4' G A 730 131.422 113.691 -54.815 1.00 72.16 O
ATOM 9 C3' G A 730 129.786 112.813 -53.327 1.00 69.70 C
ATOM 10 O3' G A 730 130.516 112.540 -52.137 1.00 69.24 O
ATOM 11 C2' G A 730 129.648 114.324 -53.433 1.00 69.67 C
ATOM 12 O2' G A 730 129.359 114.961 -52.211 1.00 68.97 O
ATOM 13 C1' G A 730 131.039 114.710 -53.922 1.00 71.02 C
ATOM 14 N9 G A 730 131.081 115.996 -54.607 1.00 72.52 N
ATOM 15 C8 G A 730 130.330 116.387 -55.689 1.00 73.53 C
ATOM 16 N7 G A 730 130.512 117.640 -56.009 1.00 74.50 N
ATOM 17 C5 G A 730 131.451 118.097 -55.094 1.00 74.27 C
ATOM 18 C6 G A 730 132.005 119.388 -54.920 1.00 76.19 C
ATOM 19 O6 G A 730 131.737 120.436 -55.536 1.00 79.94 O
ATOM 20 N1 G A 730 132.948 119.403 -53.894 1.00 74.97 N
ATOM 21 C2 G A 730 133.299 118.325 -53.127 1.00 72.56 C
ATOM 22 N2 G A 730 134.255 118.545 -52.211 1.00 71.41 N
ATOM 23 N3 G A 730 132.759 117.124 -53.254 1.00 71.57 N
ATOM 24 C4 G A 730 131.847 117.083 -54.251 1.00 72.64 C
ATOM 25 P A A 731 129.830 111.754 -50.913 1.00 68.09 P
ATOM 26 OP1 A A 731 129.480 110.395 -51.425 1.00 66.14 O
ATOM 27 OP2 A A 731 128.799 112.616 -50.291 1.00 66.01 O
ATOM 28 O5' A A 731 131.041 111.581 -49.882 1.00 68.00 O
TER

ATOM 1 O3' A B 631 138.380 122.602 -47.666 1.00 73.98 O
ATOM 2 P G B 632 139.676 122.003 -48.406 1.00 73.49 P
ATOM 3 OP1 G B 632 140.824 122.796 -47.870 1.00 72.18 O
ATOM 4 OP2 G B 632 139.454 121.916 -49.890 1.00 72.17 O
ATOM 5 O5' G B 632 139.784 120.528 -47.824 1.00 72.78 O
ATOM 6 C5' G B 632 140.345 120.276 -46.516 1.00 70.35 C
ATOM 7 C4' G B 632 140.374 118.790 -46.240 1.00 69.09 C
ATOM 8 O4' G B 632 139.016 118.294 -46.118 1.00 68.38 O
ATOM 9 C3' G B 632 140.990 117.938 -47.336 1.00 68.85 C
ATOM 10 O3' G B 632 142.387 117.845 -47.216 1.00 69.62 O
ATOM 11 C2' G B 632 140.325 116.588 -47.127 1.00 68.15 C
ATOM 12 O2' G B 632 140.957 115.833 -46.115 1.00 68.58 O
ATOM 13 C1' G B 632 138.923 116.997 -46.678 1.00 67.02 C
ATOM 14 N9 G B 632 137.983 117.048 -47.795 1.00 64.76 N
ATOM 15 C8 G B 632 137.472 118.166 -48.403 1.00 63.68 C
ATOM 16 N7 G B 632 136.679 117.890 -49.398 1.00 62.88 N
ATOM 17 C5 G B 632 136.663 116.508 -49.449 1.00 63.75 C
ATOM 18 C6 G B 632 135.989 115.634 -50.333 1.00 65.64 C
ATOM 19 O6 G B 632 135.252 115.918 -51.281 1.00 67.23 O
ATOM 20 N1 G B 632 136.251 114.303 -50.033 1.00 65.71 N
ATOM 21 C2 G B 632 137.065 113.872 -49.018 1.00 65.07 C
ATOM 22 N2 G B 632 137.209 112.553 -48.903 1.00 64.59 N
ATOM 23 N3 G B 632 137.697 114.678 -48.184 1.00 64.49 N
ATOM 24 C4 G B 632 137.454 115.974 -48.459 1.00 63.96 C
ATOM 25 P A B 633 143.288 117.735 -48.540 1.00 71.18 P
ATOM 26 OP1 A B 633 144.687 117.573 -48.046 1.00 70.98 O
ATOM 27 OP2 A B 633 142.941 118.864 -49.438 1.00 70.62 O
ATOM 28 O5' A B 633 142.817 116.376 -49.249 1.00 69.46 O
TER

Atoms:
OP1: (127.872,111.986,-58.079)
OP2: (128.359,114.524,-58.188)
C3': (129.786,112.813,-53.327)
C1': (131.039,114.710,-53.922)
C5': (129.994,112.036,-55.761)
O6: (131.737,120.436,-55.536)
O4': (131.422,113.691,-54.815)
C8: (130.330,116.387,-55.689)
C2: (133.299,118.325,-53.127)
C6: (132.005,119.388,-54.920)
C5: (131.451,118.097,-55.094)
C4: (131.847,117.083,-54.251)
P: (128.783,113.146,-57.835)
C4': (130.691,112.474,-54.507)
C2': (129.648,114.324,-53.433)
O2': (129.359,114.961,-52.211)
N1: (132.948,119.403,-53.894)
N2: (134.255,118.545,-52.211)
N3: (132.759,117.124,-53.254)
N7: (130.512,117.640,-56.009)
N9: (131.081,115.996,-54.607)
O5': (129.244,113.136,-56.307)
O3': (130.516,112.540,-52.137)
OP1: (140.824,122.796,-47.870)
OP2: (139.454,121.916,-49.890)
C3': (140.990,117.938,-47.336)
C1': (138.923,116.997,-46.678)
C5': (140.345,120.276,-46.516)
O6: (135.252,115.918,-51.281)
O4': (139.016,118.294,-46.118)
C8: (137.472,118.166,-48.403)
C2: (137.065,113.872,-49.018)
C6: (135.989,115.634,-50.333)
C5: (136.663,116.508,-49.449)
C4: (137.454,115.974,-48.459)
P: (139.676,122.003,-48.406)
C4': (140.374,118.790,-46.240)
C2': (140.325,116.588,-47.127)
O2': (140.957,115.833,-46.115)
N1: (136.251,114.303,-50.033)
N2: (137.209,112.553,-48.903)
N3: (137.697,114.678,-48.184)
N7: (136.679,117.890,-49.398)
N9: (137.983,117.048,-47.795)
O5': (139.784,120.528,-47.824)
O3': (142.387,117.845,-47.216)
Image (generated by PyMOL):
PyMOL image
show in jmol