Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIL:A140:A162
Extra
PDB:
ATOM 1 O3' U A 139 43.063 18.603 22.158 1.00 18.56 O
ATOM 2 P G A 140 43.876 17.260 21.819 1.00 17.36 P
ATOM 3 OP1 G A 140 44.662 16.917 23.025 1.00 16.42 O
ATOM 4 OP2 G A 140 44.549 17.389 20.507 1.00 18.29 O
ATOM 5 O5' G A 140 42.709 16.185 21.625 1.00 17.33 O
ATOM 6 C5' G A 140 41.871 15.849 22.719 1.00 17.08 C
ATOM 7 C4' G A 140 40.549 15.286 22.237 1.00 16.89 C
ATOM 8 O4' G A 140 39.884 16.238 21.366 1.00 16.37 O
ATOM 9 C3' G A 140 40.667 14.048 21.368 1.00 16.90 C
ATOM 10 O3' G A 140 40.924 12.891 22.155 1.00 16.85 O
ATOM 11 C2' G A 140 39.297 14.038 20.696 1.00 16.56 C
ATOM 12 O2' G A 140 38.261 13.568 21.536 1.00 17.02 O
ATOM 13 C1' G A 140 39.124 15.529 20.403 1.00 16.87 C
ATOM 14 N9 G A 140 39.579 15.880 19.056 1.00 17.19 N
ATOM 15 C8 G A 140 40.746 16.514 18.694 1.00 16.92 C
ATOM 16 N7 G A 140 40.870 16.682 17.406 1.00 17.02 N
ATOM 17 C5 G A 140 39.715 16.116 16.875 1.00 17.24 C
ATOM 18 C6 G A 140 39.283 15.988 15.528 1.00 17.53 C
ATOM 19 O6 G A 140 39.857 16.370 14.501 1.00 17.19 O
ATOM 20 N1 G A 140 38.047 15.344 15.429 1.00 16.87 N
ATOM 21 C2 G A 140 37.319 14.879 16.501 1.00 17.31 C
ATOM 22 N2 G A 140 36.150 14.285 16.225 1.00 17.00 N
ATOM 23 N3 G A 140 37.712 14.990 17.766 1.00 17.14 N
ATOM 24 C4 G A 140 38.913 15.614 17.879 1.00 17.28 C
ATOM 25 P U A 141 41.956 11.787 21.625 1.00 17.23 P
ATOM 26 OP1 U A 141 42.180 10.822 22.723 1.00 16.52 O
ATOM 27 OP2 U A 141 43.106 12.470 20.990 1.00 16.91 O
ATOM 28 O5' U A 141 41.138 11.089 20.444 1.00 16.79 O
TER
ATOM 1 O3' A B 161 31.070 11.491 9.016 1.00 22.27 O
ATOM 2 P G B 162 29.515 11.111 9.003 1.00 22.82 P
ATOM 3 OP1 G B 162 29.391 9.842 8.259 1.00 22.93 O
ATOM 4 OP2 G B 162 28.729 12.297 8.586 1.00 22.87 O
ATOM 5 O5' G B 162 29.168 10.784 10.524 1.00 21.45 O
ATOM 6 C5' G B 162 30.053 11.096 11.581 1.00 19.92 C
ATOM 7 C4' G B 162 29.351 10.858 12.904 1.00 19.03 C
ATOM 8 O4' G B 162 30.337 10.836 13.961 1.00 17.65 O
ATOM 9 C3' G B 162 28.341 11.925 13.313 1.00 19.47 C
ATOM 10 O3' G B 162 27.263 11.329 14.044 1.00 20.69 O
ATOM 11 C2' G B 162 29.182 12.849 14.195 1.00 18.97 C
ATOM 12 O2' G B 162 28.399 13.601 15.097 1.00 19.83 O
ATOM 13 C1' G B 162 30.003 11.802 14.936 1.00 18.43 C
ATOM 14 N9 G B 162 31.250 12.254 15.545 1.00 18.16 N
ATOM 15 C8 G B 162 32.424 12.576 14.907 1.00 17.69 C
ATOM 16 N7 G B 162 33.377 12.933 15.723 1.00 18.30 N
ATOM 17 C5 G B 162 32.799 12.832 16.983 1.00 18.14 C
ATOM 18 C6 G B 162 33.343 13.097 18.264 1.00 17.84 C
ATOM 19 O6 G B 162 34.493 13.477 18.535 1.00 18.58 O
ATOM 20 N1 G B 162 32.420 12.865 19.287 1.00 17.39 N
ATOM 21 C2 G B 162 31.121 12.440 19.094 1.00 17.45 C
ATOM 22 N2 G B 162 30.368 12.274 20.193 1.00 16.80 N
ATOM 23 N3 G B 162 30.598 12.196 17.896 1.00 17.29 N
ATOM 24 C4 G B 162 31.487 12.412 16.891 1.00 17.81 C
ATOM 25 P A B 163 25.866 10.913 13.371 1.00 21.86 P
ATOM 26 OP1 A B 163 25.539 11.862 12.289 1.00 21.79 O
ATOM 27 OP2 A B 163 24.901 10.682 14.468 1.00 22.91 O
ATOM 28 O5' A B 163 26.233 9.509 12.701 1.00 22.48 O
TER
ATOM 2 P G A 140 43.876 17.260 21.819 1.00 17.36 P
ATOM 3 OP1 G A 140 44.662 16.917 23.025 1.00 16.42 O
ATOM 4 OP2 G A 140 44.549 17.389 20.507 1.00 18.29 O
ATOM 5 O5' G A 140 42.709 16.185 21.625 1.00 17.33 O
ATOM 6 C5' G A 140 41.871 15.849 22.719 1.00 17.08 C
ATOM 7 C4' G A 140 40.549 15.286 22.237 1.00 16.89 C
ATOM 8 O4' G A 140 39.884 16.238 21.366 1.00 16.37 O
ATOM 9 C3' G A 140 40.667 14.048 21.368 1.00 16.90 C
ATOM 10 O3' G A 140 40.924 12.891 22.155 1.00 16.85 O
ATOM 11 C2' G A 140 39.297 14.038 20.696 1.00 16.56 C
ATOM 12 O2' G A 140 38.261 13.568 21.536 1.00 17.02 O
ATOM 13 C1' G A 140 39.124 15.529 20.403 1.00 16.87 C
ATOM 14 N9 G A 140 39.579 15.880 19.056 1.00 17.19 N
ATOM 15 C8 G A 140 40.746 16.514 18.694 1.00 16.92 C
ATOM 16 N7 G A 140 40.870 16.682 17.406 1.00 17.02 N
ATOM 17 C5 G A 140 39.715 16.116 16.875 1.00 17.24 C
ATOM 18 C6 G A 140 39.283 15.988 15.528 1.00 17.53 C
ATOM 19 O6 G A 140 39.857 16.370 14.501 1.00 17.19 O
ATOM 20 N1 G A 140 38.047 15.344 15.429 1.00 16.87 N
ATOM 21 C2 G A 140 37.319 14.879 16.501 1.00 17.31 C
ATOM 22 N2 G A 140 36.150 14.285 16.225 1.00 17.00 N
ATOM 23 N3 G A 140 37.712 14.990 17.766 1.00 17.14 N
ATOM 24 C4 G A 140 38.913 15.614 17.879 1.00 17.28 C
ATOM 25 P U A 141 41.956 11.787 21.625 1.00 17.23 P
ATOM 26 OP1 U A 141 42.180 10.822 22.723 1.00 16.52 O
ATOM 27 OP2 U A 141 43.106 12.470 20.990 1.00 16.91 O
ATOM 28 O5' U A 141 41.138 11.089 20.444 1.00 16.79 O
TER
ATOM 1 O3' A B 161 31.070 11.491 9.016 1.00 22.27 O
ATOM 2 P G B 162 29.515 11.111 9.003 1.00 22.82 P
ATOM 3 OP1 G B 162 29.391 9.842 8.259 1.00 22.93 O
ATOM 4 OP2 G B 162 28.729 12.297 8.586 1.00 22.87 O
ATOM 5 O5' G B 162 29.168 10.784 10.524 1.00 21.45 O
ATOM 6 C5' G B 162 30.053 11.096 11.581 1.00 19.92 C
ATOM 7 C4' G B 162 29.351 10.858 12.904 1.00 19.03 C
ATOM 8 O4' G B 162 30.337 10.836 13.961 1.00 17.65 O
ATOM 9 C3' G B 162 28.341 11.925 13.313 1.00 19.47 C
ATOM 10 O3' G B 162 27.263 11.329 14.044 1.00 20.69 O
ATOM 11 C2' G B 162 29.182 12.849 14.195 1.00 18.97 C
ATOM 12 O2' G B 162 28.399 13.601 15.097 1.00 19.83 O
ATOM 13 C1' G B 162 30.003 11.802 14.936 1.00 18.43 C
ATOM 14 N9 G B 162 31.250 12.254 15.545 1.00 18.16 N
ATOM 15 C8 G B 162 32.424 12.576 14.907 1.00 17.69 C
ATOM 16 N7 G B 162 33.377 12.933 15.723 1.00 18.30 N
ATOM 17 C5 G B 162 32.799 12.832 16.983 1.00 18.14 C
ATOM 18 C6 G B 162 33.343 13.097 18.264 1.00 17.84 C
ATOM 19 O6 G B 162 34.493 13.477 18.535 1.00 18.58 O
ATOM 20 N1 G B 162 32.420 12.865 19.287 1.00 17.39 N
ATOM 21 C2 G B 162 31.121 12.440 19.094 1.00 17.45 C
ATOM 22 N2 G B 162 30.368 12.274 20.193 1.00 16.80 N
ATOM 23 N3 G B 162 30.598 12.196 17.896 1.00 17.29 N
ATOM 24 C4 G B 162 31.487 12.412 16.891 1.00 17.81 C
ATOM 25 P A B 163 25.866 10.913 13.371 1.00 21.86 P
ATOM 26 OP1 A B 163 25.539 11.862 12.289 1.00 21.79 O
ATOM 27 OP2 A B 163 24.901 10.682 14.468 1.00 22.91 O
ATOM 28 O5' A B 163 26.233 9.509 12.701 1.00 22.48 O
TER
Atoms:
OP1: (44.662,16.917,23.025)
OP2: (44.549,17.389,20.507)
C3': (40.667,14.048,21.368)
C1': (39.124,15.529,20.403)
C5': (41.871,15.849,22.719)
O6: (39.857,16.370,14.501)
O4': (39.884,16.238,21.366)
C8: (40.746,16.514,18.694)
C2: (37.319,14.879,16.501)
C6: (39.283,15.988,15.528)
C5: (39.715,16.116,16.875)
C4: (38.913,15.614,17.879)
P: (43.876,17.260,21.819)
C4': (40.549,15.286,22.237)
C2': (39.297,14.038,20.696)
O2': (38.261,13.568,21.536)
N1: (38.047,15.344,15.429)
N2: (36.150,14.285,16.225)
N3: (37.712,14.990,17.766)
N7: (40.870,16.682,17.406)
N9: (39.579,15.880,19.056)
O5': (42.709,16.185,21.625)
O3': (40.924,12.891,22.155)
OP2: (44.549,17.389,20.507)
C3': (40.667,14.048,21.368)
C1': (39.124,15.529,20.403)
C5': (41.871,15.849,22.719)
O6: (39.857,16.370,14.501)
O4': (39.884,16.238,21.366)
C8: (40.746,16.514,18.694)
C2: (37.319,14.879,16.501)
C6: (39.283,15.988,15.528)
C5: (39.715,16.116,16.875)
C4: (38.913,15.614,17.879)
P: (43.876,17.260,21.819)
C4': (40.549,15.286,22.237)
C2': (39.297,14.038,20.696)
O2': (38.261,13.568,21.536)
N1: (38.047,15.344,15.429)
N2: (36.150,14.285,16.225)
N3: (37.712,14.990,17.766)
N7: (40.870,16.682,17.406)
N9: (39.579,15.880,19.056)
O5': (42.709,16.185,21.625)
O3': (40.924,12.891,22.155)
OP1: (29.391,9.842,8.259)
OP2: (28.729,12.297,8.586)
C3': (28.341,11.925,13.313)
C1': (30.003,11.802,14.936)
C5': (30.053,11.096,11.581)
O6: (34.493,13.477,18.535)
O4': (30.337,10.836,13.961)
C8: (32.424,12.576,14.907)
C2: (31.121,12.440,19.094)
C6: (33.343,13.097,18.264)
C5: (32.799,12.832,16.983)
C4: (31.487,12.412,16.891)
P: (29.515,11.111,9.003)
C4': (29.351,10.858,12.904)
C2': (29.182,12.849,14.195)
O2': (28.399,13.601,15.097)
N1: (32.420,12.865,19.287)
N2: (30.368,12.274,20.193)
N3: (30.598,12.196,17.896)
N7: (33.377,12.933,15.723)
N9: (31.250,12.254,15.545)
O5': (29.168,10.784,10.524)
O3': (27.263,11.329,14.044)
OP2: (28.729,12.297,8.586)
C3': (28.341,11.925,13.313)
C1': (30.003,11.802,14.936)
C5': (30.053,11.096,11.581)
O6: (34.493,13.477,18.535)
O4': (30.337,10.836,13.961)
C8: (32.424,12.576,14.907)
C2: (31.121,12.440,19.094)
C6: (33.343,13.097,18.264)
C5: (32.799,12.832,16.983)
C4: (31.487,12.412,16.891)
P: (29.515,11.111,9.003)
C4': (29.351,10.858,12.904)
C2': (29.182,12.849,14.195)
O2': (28.399,13.601,15.097)
N1: (32.420,12.865,19.287)
N2: (30.368,12.274,20.193)
N3: (30.598,12.196,17.896)
N7: (33.377,12.933,15.723)
N9: (31.250,12.254,15.545)
O5': (29.168,10.784,10.524)
O3': (27.263,11.329,14.044)
Image (generated by PyMOL):