Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIO:X140:X162
Extra
PDB:
ATOM 1 O3' U A 139 42.812 18.590 22.293 1.00 13.19 O
ATOM 2 P G A 140 43.607 17.228 21.996 1.00 13.33 P
ATOM 3 OP1 G A 140 44.388 16.891 23.204 1.00 14.63 O
ATOM 4 OP2 G A 140 44.304 17.314 20.695 1.00 14.27 O
ATOM 5 O5' G A 140 42.411 16.197 21.803 1.00 13.01 O
ATOM 6 C5' G A 140 41.570 15.796 22.868 1.00 12.15 C
ATOM 7 C4' G A 140 40.294 15.216 22.291 1.00 12.09 C
ATOM 8 O4' G A 140 39.699 16.166 21.374 1.00 11.19 O
ATOM 9 C3' G A 140 40.473 14.000 21.403 1.00 12.30 C
ATOM 10 O3' G A 140 40.734 12.818 22.152 1.00 13.80 O
ATOM 11 C2' G A 140 39.121 13.977 20.700 1.00 11.98 C
ATOM 12 O2' G A 140 38.058 13.479 21.495 1.00 12.94 O
ATOM 13 C1' G A 140 38.939 15.462 20.406 1.00 10.46 C
ATOM 14 N9 G A 140 39.395 15.821 19.058 1.00 9.80 N
ATOM 15 C8 G A 140 40.563 16.466 18.723 1.00 8.49 C
ATOM 16 N7 G A 140 40.709 16.642 17.444 1.00 7.99 N
ATOM 17 C5 G A 140 39.564 16.086 16.888 1.00 8.06 C
ATOM 18 C6 G A 140 39.166 15.984 15.531 1.00 7.78 C
ATOM 19 O6 G A 140 39.769 16.385 14.530 1.00 8.44 O
ATOM 20 N1 G A 140 37.942 15.335 15.385 1.00 7.57 N
ATOM 21 C2 G A 140 37.193 14.851 16.435 1.00 8.08 C
ATOM 22 N2 G A 140 36.032 14.264 16.111 1.00 8.71 N
ATOM 23 N3 G A 140 37.553 14.938 17.714 1.00 7.74 N
ATOM 24 C4 G A 140 38.746 15.568 17.867 1.00 8.24 C
ATOM 25 P U A 141 41.726 11.714 21.550 1.00 13.62 P
ATOM 26 OP1 U A 141 41.983 10.690 22.586 1.00 14.20 O
ATOM 27 OP2 U A 141 42.852 12.422 20.907 1.00 14.44 O
ATOM 28 O5' U A 141 40.860 11.061 20.384 1.00 13.91 O
TER
ATOM 1 O3' A B 161 30.904 11.527 9.078 1.00 15.86 O
ATOM 2 P G B 162 29.366 11.118 9.089 1.00 16.11 P
ATOM 3 OP1 G B 162 29.319 9.707 8.653 1.00 17.11 O
ATOM 4 OP2 G B 162 28.574 12.155 8.395 1.00 16.77 O
ATOM 5 O5' G B 162 28.960 11.170 10.635 1.00 15.55 O
ATOM 6 C5' G B 162 29.877 10.891 11.681 1.00 13.23 C
ATOM 7 C4' G B 162 29.148 10.745 13.008 1.00 11.87 C
ATOM 8 O4' G B 162 30.126 10.748 14.073 1.00 11.02 O
ATOM 9 C3' G B 162 28.158 11.853 13.374 1.00 11.54 C
ATOM 10 O3' G B 162 27.045 11.345 14.142 1.00 12.42 O
ATOM 11 C2' G B 162 29.030 12.796 14.197 1.00 10.52 C
ATOM 12 O2' G B 162 28.279 13.606 15.069 1.00 11.38 O
ATOM 13 C1' G B 162 29.817 11.770 14.997 1.00 9.46 C
ATOM 14 N9 G B 162 31.061 12.251 15.588 1.00 8.22 N
ATOM 15 C8 G B 162 32.221 12.615 14.942 1.00 7.16 C
ATOM 16 N7 G B 162 33.167 13.000 15.754 1.00 7.33 N
ATOM 17 C5 G B 162 32.601 12.881 17.021 1.00 7.49 C
ATOM 18 C6 G B 162 33.142 13.149 18.308 1.00 6.78 C
ATOM 19 O6 G B 162 34.273 13.575 18.587 1.00 6.62 O
ATOM 20 N1 G B 162 32.220 12.887 19.328 1.00 6.55 N
ATOM 21 C2 G B 162 30.933 12.427 19.128 1.00 6.64 C
ATOM 22 N2 G B 162 30.173 12.226 20.213 1.00 6.05 N
ATOM 23 N3 G B 162 30.422 12.178 17.929 1.00 6.81 N
ATOM 24 C4 G B 162 31.302 12.421 16.929 1.00 7.12 C
ATOM 25 P A B 163 25.718 10.718 13.480 1.00 13.36 P
ATOM 26 OP1 A B 163 25.405 11.465 12.245 1.00 12.69 O
ATOM 27 OP2 A B 163 24.682 10.582 14.531 1.00 14.26 O
ATOM 28 O5' A B 163 26.244 9.256 13.102 1.00 16.01 O
TER
ATOM 2 P G A 140 43.607 17.228 21.996 1.00 13.33 P
ATOM 3 OP1 G A 140 44.388 16.891 23.204 1.00 14.63 O
ATOM 4 OP2 G A 140 44.304 17.314 20.695 1.00 14.27 O
ATOM 5 O5' G A 140 42.411 16.197 21.803 1.00 13.01 O
ATOM 6 C5' G A 140 41.570 15.796 22.868 1.00 12.15 C
ATOM 7 C4' G A 140 40.294 15.216 22.291 1.00 12.09 C
ATOM 8 O4' G A 140 39.699 16.166 21.374 1.00 11.19 O
ATOM 9 C3' G A 140 40.473 14.000 21.403 1.00 12.30 C
ATOM 10 O3' G A 140 40.734 12.818 22.152 1.00 13.80 O
ATOM 11 C2' G A 140 39.121 13.977 20.700 1.00 11.98 C
ATOM 12 O2' G A 140 38.058 13.479 21.495 1.00 12.94 O
ATOM 13 C1' G A 140 38.939 15.462 20.406 1.00 10.46 C
ATOM 14 N9 G A 140 39.395 15.821 19.058 1.00 9.80 N
ATOM 15 C8 G A 140 40.563 16.466 18.723 1.00 8.49 C
ATOM 16 N7 G A 140 40.709 16.642 17.444 1.00 7.99 N
ATOM 17 C5 G A 140 39.564 16.086 16.888 1.00 8.06 C
ATOM 18 C6 G A 140 39.166 15.984 15.531 1.00 7.78 C
ATOM 19 O6 G A 140 39.769 16.385 14.530 1.00 8.44 O
ATOM 20 N1 G A 140 37.942 15.335 15.385 1.00 7.57 N
ATOM 21 C2 G A 140 37.193 14.851 16.435 1.00 8.08 C
ATOM 22 N2 G A 140 36.032 14.264 16.111 1.00 8.71 N
ATOM 23 N3 G A 140 37.553 14.938 17.714 1.00 7.74 N
ATOM 24 C4 G A 140 38.746 15.568 17.867 1.00 8.24 C
ATOM 25 P U A 141 41.726 11.714 21.550 1.00 13.62 P
ATOM 26 OP1 U A 141 41.983 10.690 22.586 1.00 14.20 O
ATOM 27 OP2 U A 141 42.852 12.422 20.907 1.00 14.44 O
ATOM 28 O5' U A 141 40.860 11.061 20.384 1.00 13.91 O
TER
ATOM 1 O3' A B 161 30.904 11.527 9.078 1.00 15.86 O
ATOM 2 P G B 162 29.366 11.118 9.089 1.00 16.11 P
ATOM 3 OP1 G B 162 29.319 9.707 8.653 1.00 17.11 O
ATOM 4 OP2 G B 162 28.574 12.155 8.395 1.00 16.77 O
ATOM 5 O5' G B 162 28.960 11.170 10.635 1.00 15.55 O
ATOM 6 C5' G B 162 29.877 10.891 11.681 1.00 13.23 C
ATOM 7 C4' G B 162 29.148 10.745 13.008 1.00 11.87 C
ATOM 8 O4' G B 162 30.126 10.748 14.073 1.00 11.02 O
ATOM 9 C3' G B 162 28.158 11.853 13.374 1.00 11.54 C
ATOM 10 O3' G B 162 27.045 11.345 14.142 1.00 12.42 O
ATOM 11 C2' G B 162 29.030 12.796 14.197 1.00 10.52 C
ATOM 12 O2' G B 162 28.279 13.606 15.069 1.00 11.38 O
ATOM 13 C1' G B 162 29.817 11.770 14.997 1.00 9.46 C
ATOM 14 N9 G B 162 31.061 12.251 15.588 1.00 8.22 N
ATOM 15 C8 G B 162 32.221 12.615 14.942 1.00 7.16 C
ATOM 16 N7 G B 162 33.167 13.000 15.754 1.00 7.33 N
ATOM 17 C5 G B 162 32.601 12.881 17.021 1.00 7.49 C
ATOM 18 C6 G B 162 33.142 13.149 18.308 1.00 6.78 C
ATOM 19 O6 G B 162 34.273 13.575 18.587 1.00 6.62 O
ATOM 20 N1 G B 162 32.220 12.887 19.328 1.00 6.55 N
ATOM 21 C2 G B 162 30.933 12.427 19.128 1.00 6.64 C
ATOM 22 N2 G B 162 30.173 12.226 20.213 1.00 6.05 N
ATOM 23 N3 G B 162 30.422 12.178 17.929 1.00 6.81 N
ATOM 24 C4 G B 162 31.302 12.421 16.929 1.00 7.12 C
ATOM 25 P A B 163 25.718 10.718 13.480 1.00 13.36 P
ATOM 26 OP1 A B 163 25.405 11.465 12.245 1.00 12.69 O
ATOM 27 OP2 A B 163 24.682 10.582 14.531 1.00 14.26 O
ATOM 28 O5' A B 163 26.244 9.256 13.102 1.00 16.01 O
TER
Atoms:
OP1: (44.388,16.891,23.204)
OP2: (44.304,17.314,20.695)
C3': (40.473,14.000,21.403)
C1': (38.939,15.462,20.406)
C5': (41.570,15.796,22.868)
O6: (39.769,16.385,14.530)
O4': (39.699,16.166,21.374)
C8: (40.563,16.466,18.723)
C2: (37.193,14.851,16.435)
C6: (39.166,15.984,15.531)
C5: (39.564,16.086,16.888)
C4: (38.746,15.568,17.867)
P: (43.607,17.228,21.996)
C4': (40.294,15.216,22.291)
C2': (39.121,13.977,20.700)
O2': (38.058,13.479,21.495)
N1: (37.942,15.335,15.385)
N2: (36.032,14.264,16.111)
N3: (37.553,14.938,17.714)
N7: (40.709,16.642,17.444)
N9: (39.395,15.821,19.058)
O5': (42.411,16.197,21.803)
O3': (40.734,12.818,22.152)
OP2: (44.304,17.314,20.695)
C3': (40.473,14.000,21.403)
C1': (38.939,15.462,20.406)
C5': (41.570,15.796,22.868)
O6: (39.769,16.385,14.530)
O4': (39.699,16.166,21.374)
C8: (40.563,16.466,18.723)
C2: (37.193,14.851,16.435)
C6: (39.166,15.984,15.531)
C5: (39.564,16.086,16.888)
C4: (38.746,15.568,17.867)
P: (43.607,17.228,21.996)
C4': (40.294,15.216,22.291)
C2': (39.121,13.977,20.700)
O2': (38.058,13.479,21.495)
N1: (37.942,15.335,15.385)
N2: (36.032,14.264,16.111)
N3: (37.553,14.938,17.714)
N7: (40.709,16.642,17.444)
N9: (39.395,15.821,19.058)
O5': (42.411,16.197,21.803)
O3': (40.734,12.818,22.152)
OP1: (29.319,9.707,8.653)
OP2: (28.574,12.155,8.395)
C3': (28.158,11.853,13.374)
C1': (29.817,11.770,14.997)
C5': (29.877,10.891,11.681)
O6: (34.273,13.575,18.587)
O4': (30.126,10.748,14.073)
C8: (32.221,12.615,14.942)
C2: (30.933,12.427,19.128)
C6: (33.142,13.149,18.308)
C5: (32.601,12.881,17.021)
C4: (31.302,12.421,16.929)
P: (29.366,11.118,9.089)
C4': (29.148,10.745,13.008)
C2': (29.030,12.796,14.197)
O2': (28.279,13.606,15.069)
N1: (32.220,12.887,19.328)
N2: (30.173,12.226,20.213)
N3: (30.422,12.178,17.929)
N7: (33.167,13.000,15.754)
N9: (31.061,12.251,15.588)
O5': (28.960,11.170,10.635)
O3': (27.045,11.345,14.142)
OP2: (28.574,12.155,8.395)
C3': (28.158,11.853,13.374)
C1': (29.817,11.770,14.997)
C5': (29.877,10.891,11.681)
O6: (34.273,13.575,18.587)
O4': (30.126,10.748,14.073)
C8: (32.221,12.615,14.942)
C2: (30.933,12.427,19.128)
C6: (33.142,13.149,18.308)
C5: (32.601,12.881,17.021)
C4: (31.302,12.421,16.929)
P: (29.366,11.118,9.089)
C4': (29.148,10.745,13.008)
C2': (29.030,12.796,14.197)
O2': (28.279,13.606,15.069)
N1: (32.220,12.887,19.328)
N2: (30.173,12.226,20.213)
N3: (30.422,12.178,17.929)
N7: (33.167,13.000,15.754)
N9: (31.061,12.251,15.588)
O5': (28.960,11.170,10.635)
O3': (27.045,11.345,14.142)
Image (generated by PyMOL):