Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIX:A140:A162
Extra
PDB:
ATOM 1 O3' U A 139 42.945 18.526 22.283 1.00 31.36 O
ATOM 2 P G A 140 43.795 17.205 21.958 1.00 30.09 P
ATOM 3 OP1 G A 140 44.553 16.838 23.169 1.00 30.16 O
ATOM 4 OP2 G A 140 44.526 17.357 20.681 1.00 30.07 O
ATOM 5 O5' G A 140 42.616 16.153 21.740 1.00 30.14 O
ATOM 6 C5' G A 140 41.752 15.822 22.822 1.00 29.26 C
ATOM 7 C4' G A 140 40.439 15.261 22.322 1.00 28.63 C
ATOM 8 O4' G A 140 39.808 16.225 21.444 1.00 28.90 O
ATOM 9 C3' G A 140 40.562 14.024 21.450 1.00 28.17 C
ATOM 10 O3' G A 140 40.810 12.860 22.219 1.00 27.35 O
ATOM 11 C2' G A 140 39.206 14.033 20.750 1.00 29.06 C
ATOM 12 O2' G A 140 38.128 13.531 21.523 1.00 29.61 O
ATOM 13 C1' G A 140 39.036 15.532 20.477 1.00 29.32 C
ATOM 14 N9 G A 140 39.487 15.878 19.130 1.00 29.09 N
ATOM 15 C8 G A 140 40.673 16.469 18.769 1.00 29.06 C
ATOM 16 N7 G A 140 40.805 16.638 17.486 1.00 29.06 N
ATOM 17 C5 G A 140 39.629 16.122 16.953 1.00 29.40 C
ATOM 18 C6 G A 140 39.195 16.024 15.606 1.00 29.47 C
ATOM 19 O6 G A 140 39.778 16.391 14.576 1.00 29.98 O
ATOM 20 N1 G A 140 37.942 15.428 15.503 1.00 29.30 N
ATOM 21 C2 G A 140 37.193 14.981 16.563 1.00 29.12 C
ATOM 22 N2 G A 140 36.008 14.436 16.259 1.00 29.32 N
ATOM 23 N3 G A 140 37.582 15.067 17.830 1.00 29.26 N
ATOM 24 C4 G A 140 38.808 15.645 17.953 1.00 29.38 C
ATOM 25 P U A 141 41.849 11.780 21.654 1.00 27.67 P
ATOM 26 OP1 U A 141 42.108 10.726 22.663 1.00 27.70 O
ATOM 27 OP2 U A 141 42.992 12.513 21.072 1.00 27.79 O
ATOM 28 O5' U A 141 41.004 11.129 20.473 1.00 27.43 O
TER
ATOM 1 O3' A B 161 31.092 11.354 9.070 1.00 32.94 O
ATOM 2 P G B 162 29.567 10.878 9.095 1.00 31.96 P
ATOM 3 OP1 G B 162 29.436 9.710 8.202 1.00 32.02 O
ATOM 4 OP2 G B 162 28.679 12.057 8.970 1.00 31.57 O
ATOM 5 O5' G B 162 29.432 10.284 10.563 1.00 31.81 O
ATOM 6 C5' G B 162 30.066 10.923 11.649 1.00 30.30 C
ATOM 7 C4' G B 162 29.258 10.683 12.904 1.00 28.91 C
ATOM 8 O4' G B 162 30.140 10.702 14.043 1.00 27.98 O
ATOM 9 C3' G B 162 28.226 11.751 13.199 1.00 28.99 C
ATOM 10 O3' G B 162 27.181 11.155 13.945 1.00 29.72 O
ATOM 11 C2' G B 162 29.045 12.734 14.032 1.00 28.56 C
ATOM 12 O2' G B 162 28.259 13.636 14.787 1.00 29.24 O
ATOM 13 C1' G B 162 29.775 11.740 14.923 1.00 27.64 C
ATOM 14 N9 G B 162 31.002 12.233 15.529 1.00 26.78 N
ATOM 15 C8 G B 162 32.126 12.661 14.870 1.00 26.59 C
ATOM 16 N7 G B 162 33.081 13.038 15.673 1.00 27.09 N
ATOM 17 C5 G B 162 32.556 12.850 16.942 1.00 26.47 C
ATOM 18 C6 G B 162 33.131 13.092 18.208 1.00 26.19 C
ATOM 19 O6 G B 162 34.256 13.533 18.456 1.00 27.20 O
ATOM 20 N1 G B 162 32.274 12.768 19.252 1.00 25.51 N
ATOM 21 C2 G B 162 31.009 12.272 19.082 1.00 25.73 C
ATOM 22 N2 G B 162 30.320 12.017 20.199 1.00 26.17 N
ATOM 23 N3 G B 162 30.453 12.039 17.899 1.00 26.24 N
ATOM 24 C4 G B 162 31.279 12.349 16.872 1.00 26.41 C
ATOM 25 P A B 163 25.756 10.845 13.293 1.00 30.03 P
ATOM 26 OP1 A B 163 25.444 11.868 12.262 1.00 29.39 O
ATOM 27 OP2 A B 163 24.791 10.644 14.402 1.00 31.15 O
ATOM 28 O5' A B 163 26.063 9.430 12.630 1.00 29.96 O
TER
ATOM 2 P G A 140 43.795 17.205 21.958 1.00 30.09 P
ATOM 3 OP1 G A 140 44.553 16.838 23.169 1.00 30.16 O
ATOM 4 OP2 G A 140 44.526 17.357 20.681 1.00 30.07 O
ATOM 5 O5' G A 140 42.616 16.153 21.740 1.00 30.14 O
ATOM 6 C5' G A 140 41.752 15.822 22.822 1.00 29.26 C
ATOM 7 C4' G A 140 40.439 15.261 22.322 1.00 28.63 C
ATOM 8 O4' G A 140 39.808 16.225 21.444 1.00 28.90 O
ATOM 9 C3' G A 140 40.562 14.024 21.450 1.00 28.17 C
ATOM 10 O3' G A 140 40.810 12.860 22.219 1.00 27.35 O
ATOM 11 C2' G A 140 39.206 14.033 20.750 1.00 29.06 C
ATOM 12 O2' G A 140 38.128 13.531 21.523 1.00 29.61 O
ATOM 13 C1' G A 140 39.036 15.532 20.477 1.00 29.32 C
ATOM 14 N9 G A 140 39.487 15.878 19.130 1.00 29.09 N
ATOM 15 C8 G A 140 40.673 16.469 18.769 1.00 29.06 C
ATOM 16 N7 G A 140 40.805 16.638 17.486 1.00 29.06 N
ATOM 17 C5 G A 140 39.629 16.122 16.953 1.00 29.40 C
ATOM 18 C6 G A 140 39.195 16.024 15.606 1.00 29.47 C
ATOM 19 O6 G A 140 39.778 16.391 14.576 1.00 29.98 O
ATOM 20 N1 G A 140 37.942 15.428 15.503 1.00 29.30 N
ATOM 21 C2 G A 140 37.193 14.981 16.563 1.00 29.12 C
ATOM 22 N2 G A 140 36.008 14.436 16.259 1.00 29.32 N
ATOM 23 N3 G A 140 37.582 15.067 17.830 1.00 29.26 N
ATOM 24 C4 G A 140 38.808 15.645 17.953 1.00 29.38 C
ATOM 25 P U A 141 41.849 11.780 21.654 1.00 27.67 P
ATOM 26 OP1 U A 141 42.108 10.726 22.663 1.00 27.70 O
ATOM 27 OP2 U A 141 42.992 12.513 21.072 1.00 27.79 O
ATOM 28 O5' U A 141 41.004 11.129 20.473 1.00 27.43 O
TER
ATOM 1 O3' A B 161 31.092 11.354 9.070 1.00 32.94 O
ATOM 2 P G B 162 29.567 10.878 9.095 1.00 31.96 P
ATOM 3 OP1 G B 162 29.436 9.710 8.202 1.00 32.02 O
ATOM 4 OP2 G B 162 28.679 12.057 8.970 1.00 31.57 O
ATOM 5 O5' G B 162 29.432 10.284 10.563 1.00 31.81 O
ATOM 6 C5' G B 162 30.066 10.923 11.649 1.00 30.30 C
ATOM 7 C4' G B 162 29.258 10.683 12.904 1.00 28.91 C
ATOM 8 O4' G B 162 30.140 10.702 14.043 1.00 27.98 O
ATOM 9 C3' G B 162 28.226 11.751 13.199 1.00 28.99 C
ATOM 10 O3' G B 162 27.181 11.155 13.945 1.00 29.72 O
ATOM 11 C2' G B 162 29.045 12.734 14.032 1.00 28.56 C
ATOM 12 O2' G B 162 28.259 13.636 14.787 1.00 29.24 O
ATOM 13 C1' G B 162 29.775 11.740 14.923 1.00 27.64 C
ATOM 14 N9 G B 162 31.002 12.233 15.529 1.00 26.78 N
ATOM 15 C8 G B 162 32.126 12.661 14.870 1.00 26.59 C
ATOM 16 N7 G B 162 33.081 13.038 15.673 1.00 27.09 N
ATOM 17 C5 G B 162 32.556 12.850 16.942 1.00 26.47 C
ATOM 18 C6 G B 162 33.131 13.092 18.208 1.00 26.19 C
ATOM 19 O6 G B 162 34.256 13.533 18.456 1.00 27.20 O
ATOM 20 N1 G B 162 32.274 12.768 19.252 1.00 25.51 N
ATOM 21 C2 G B 162 31.009 12.272 19.082 1.00 25.73 C
ATOM 22 N2 G B 162 30.320 12.017 20.199 1.00 26.17 N
ATOM 23 N3 G B 162 30.453 12.039 17.899 1.00 26.24 N
ATOM 24 C4 G B 162 31.279 12.349 16.872 1.00 26.41 C
ATOM 25 P A B 163 25.756 10.845 13.293 1.00 30.03 P
ATOM 26 OP1 A B 163 25.444 11.868 12.262 1.00 29.39 O
ATOM 27 OP2 A B 163 24.791 10.644 14.402 1.00 31.15 O
ATOM 28 O5' A B 163 26.063 9.430 12.630 1.00 29.96 O
TER
Atoms:
OP1: (44.553,16.838,23.169)
OP2: (44.526,17.357,20.681)
C3': (40.562,14.024,21.450)
C1': (39.036,15.532,20.477)
C5': (41.752,15.822,22.822)
O6: (39.778,16.391,14.576)
O4': (39.808,16.225,21.444)
C8: (40.673,16.469,18.769)
C2: (37.193,14.981,16.563)
C6: (39.195,16.024,15.606)
C5: (39.629,16.122,16.953)
C4: (38.808,15.645,17.953)
P: (43.795,17.205,21.958)
C4': (40.439,15.261,22.322)
C2': (39.206,14.033,20.750)
O2': (38.128,13.531,21.523)
N1: (37.942,15.428,15.503)
N2: (36.008,14.436,16.259)
N3: (37.582,15.067,17.830)
N7: (40.805,16.638,17.486)
N9: (39.487,15.878,19.130)
O5': (42.616,16.153,21.740)
O3': (40.810,12.860,22.219)
OP2: (44.526,17.357,20.681)
C3': (40.562,14.024,21.450)
C1': (39.036,15.532,20.477)
C5': (41.752,15.822,22.822)
O6: (39.778,16.391,14.576)
O4': (39.808,16.225,21.444)
C8: (40.673,16.469,18.769)
C2: (37.193,14.981,16.563)
C6: (39.195,16.024,15.606)
C5: (39.629,16.122,16.953)
C4: (38.808,15.645,17.953)
P: (43.795,17.205,21.958)
C4': (40.439,15.261,22.322)
C2': (39.206,14.033,20.750)
O2': (38.128,13.531,21.523)
N1: (37.942,15.428,15.503)
N2: (36.008,14.436,16.259)
N3: (37.582,15.067,17.830)
N7: (40.805,16.638,17.486)
N9: (39.487,15.878,19.130)
O5': (42.616,16.153,21.740)
O3': (40.810,12.860,22.219)
OP1: (29.436,9.710,8.202)
OP2: (28.679,12.057,8.970)
C3': (28.226,11.751,13.199)
C1': (29.775,11.740,14.923)
C5': (30.066,10.923,11.649)
O6: (34.256,13.533,18.456)
O4': (30.140,10.702,14.043)
C8: (32.126,12.661,14.870)
C2: (31.009,12.272,19.082)
C6: (33.131,13.092,18.208)
C5: (32.556,12.850,16.942)
C4: (31.279,12.349,16.872)
P: (29.567,10.878,9.095)
C4': (29.258,10.683,12.904)
C2': (29.045,12.734,14.032)
O2': (28.259,13.636,14.787)
N1: (32.274,12.768,19.252)
N2: (30.320,12.017,20.199)
N3: (30.453,12.039,17.899)
N7: (33.081,13.038,15.673)
N9: (31.002,12.233,15.529)
O5': (29.432,10.284,10.563)
O3': (27.181,11.155,13.945)
OP2: (28.679,12.057,8.970)
C3': (28.226,11.751,13.199)
C1': (29.775,11.740,14.923)
C5': (30.066,10.923,11.649)
O6: (34.256,13.533,18.456)
O4': (30.140,10.702,14.043)
C8: (32.126,12.661,14.870)
C2: (31.009,12.272,19.082)
C6: (33.131,13.092,18.208)
C5: (32.556,12.850,16.942)
C4: (31.279,12.349,16.872)
P: (29.567,10.878,9.095)
C4': (29.258,10.683,12.904)
C2': (29.045,12.734,14.032)
O2': (28.259,13.636,14.787)
N1: (32.274,12.768,19.252)
N2: (30.320,12.017,20.199)
N3: (30.453,12.039,17.899)
N7: (33.081,13.038,15.673)
N9: (31.002,12.233,15.529)
O5': (29.432,10.284,10.563)
O3': (27.181,11.155,13.945)
Image (generated by PyMOL):