ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3G9C:R26:G6

Extra

PDB:
ATOM 1 O3' U A 25 1.308 -35.253 66.687 1.00 56.25 O
ATOM 2 P G A 26 1.479 -33.860 67.467 1.00 56.13 P
ATOM 3 OP1 G A 26 2.900 -33.460 67.363 1.00 55.92 O
ATOM 4 OP2 G A 26 0.851 -33.985 68.801 1.00 56.05 O
ATOM 5 O5' G A 26 0.598 -32.840 66.609 1.00 56.05 O
ATOM 6 C5' G A 26 0.921 -32.533 65.259 1.00 56.03 C
ATOM 7 C4' G A 26 -0.297 -31.970 64.551 1.00 56.07 C
ATOM 8 O4' G A 26 -1.378 -32.932 64.581 1.00 56.01 O
ATOM 9 C3' G A 26 -0.900 -30.730 65.190 1.00 55.95 C
ATOM 10 O3' G A 26 -0.171 -29.588 64.789 1.00 56.00 O
ATOM 11 C2' G A 26 -2.318 -30.750 64.624 1.00 56.07 C
ATOM 12 O2' G A 26 -2.417 -30.209 63.318 1.00 56.26 O
ATOM 13 C1' G A 26 -2.617 -32.249 64.611 1.00 55.85 C
ATOM 14 N9 G A 26 -3.365 -32.686 65.787 1.00 55.55 N
ATOM 15 C8 G A 26 -2.863 -33.011 67.026 1.00 55.27 C
ATOM 16 N7 G A 26 -3.779 -33.363 67.882 1.00 55.28 N
ATOM 17 C5 G A 26 -4.966 -33.263 67.169 1.00 55.45 C
ATOM 18 C6 G A 26 -6.303 -33.519 67.569 1.00 55.58 C
ATOM 19 O6 G A 26 -6.708 -33.896 68.679 1.00 56.02 O
ATOM 20 N1 G A 26 -7.215 -33.293 66.535 1.00 54.86 N
ATOM 21 C2 G A 26 -6.876 -32.874 65.271 1.00 54.68 C
ATOM 22 N2 G A 26 -7.883 -32.709 64.403 1.00 54.86 N
ATOM 23 N3 G A 26 -5.630 -32.633 64.884 1.00 54.96 N
ATOM 24 C4 G A 26 -4.729 -32.846 65.877 1.00 55.30 C
ATOM 25 P A A 27 0.534 -28.642 65.867 1.00 55.60 P
ATOM 26 OP1 A A 27 1.021 -29.464 67.003 1.00 55.58 O
ATOM 27 OP2 A A 27 -0.380 -27.508 66.129 1.00 55.19 O
ATOM 28 O5' A A 27 1.790 -28.128 65.019 1.00 55.31 O
TER

ATOM 1 O3' A B 5 -15.546 -34.547 63.876 1.00 77.49 O
ATOM 2 P G B 6 -14.607 -35.521 63.017 1.00 77.30 P
ATOM 3 OP1 G B 6 -15.414 -36.700 62.625 1.00 77.12 O
ATOM 4 OP2 G B 6 -13.338 -35.726 63.754 1.00 77.06 O
ATOM 5 O5' G B 6 -14.291 -34.642 61.715 1.00 76.86 O
ATOM 6 C5' G B 6 -15.319 -34.340 60.769 1.00 76.17 C
ATOM 7 C4' G B 6 -14.753 -33.672 59.526 1.00 75.58 C
ATOM 8 O4' G B 6 -14.000 -32.495 59.915 1.00 75.63 O
ATOM 9 C3' G B 6 -13.778 -34.518 58.717 1.00 75.21 C
ATOM 10 O3' G B 6 -14.468 -35.315 57.752 1.00 74.47 O
ATOM 11 C2' G B 6 -12.884 -33.464 58.064 1.00 75.28 C
ATOM 12 O2' G B 6 -13.406 -32.935 56.857 1.00 75.26 O
ATOM 13 C1' G B 6 -12.816 -32.386 59.143 1.00 75.34 C
ATOM 14 N9 G B 6 -11.646 -32.511 60.017 1.00 75.19 N
ATOM 15 C8 G B 6 -11.636 -32.833 61.354 1.00 75.12 C
ATOM 16 N7 G B 6 -10.440 -32.873 61.875 1.00 75.16 N
ATOM 17 C5 G B 6 -9.597 -32.557 60.817 1.00 74.98 C
ATOM 18 C6 G B 6 -8.183 -32.442 60.774 1.00 74.84 C
ATOM 19 O6 G B 6 -7.377 -32.606 61.700 1.00 74.76 O
ATOM 20 N1 G B 6 -7.720 -32.101 59.502 1.00 74.72 N
ATOM 21 C2 G B 6 -8.532 -31.896 58.407 1.00 74.90 C
ATOM 22 N2 G B 6 -7.928 -31.576 57.255 1.00 74.92 N
ATOM 23 N3 G B 6 -9.855 -31.999 58.436 1.00 75.07 N
ATOM 24 C4 G B 6 -10.324 -32.331 59.667 1.00 75.08 C
ATOM 25 P A B 7 -13.989 -36.810 57.418 1.00 74.00 P
ATOM 26 OP1 A B 7 -14.828 -37.295 56.297 1.00 74.07 O
ATOM 27 OP2 A B 7 -13.952 -37.575 58.687 1.00 73.96 O
ATOM 28 O5' A B 7 -12.478 -36.643 56.914 1.00 72.95 O
TER

Atoms:
OP1: (2.900,-33.460,67.363)
OP2: (0.851,-33.985,68.801)
C3': (-0.900,-30.730,65.190)
C1': (-2.617,-32.249,64.611)
C5': (0.921,-32.533,65.259)
O6: (-6.708,-33.896,68.679)
O4': (-1.378,-32.932,64.581)
C8: (-2.863,-33.011,67.026)
C2: (-6.876,-32.874,65.271)
C6: (-6.303,-33.519,67.569)
C5: (-4.966,-33.263,67.169)
C4: (-4.729,-32.846,65.877)
P: (1.479,-33.860,67.467)
C4': (-0.297,-31.970,64.551)
C2': (-2.318,-30.750,64.624)
O2': (-2.417,-30.209,63.318)
N1: (-7.215,-33.293,66.535)
N2: (-7.883,-32.709,64.403)
N3: (-5.630,-32.633,64.884)
N7: (-3.779,-33.363,67.882)
N9: (-3.365,-32.686,65.787)
O5': (0.598,-32.840,66.609)
O3': (-0.171,-29.588,64.789)
OP1: (-15.414,-36.700,62.625)
OP2: (-13.338,-35.726,63.754)
C3': (-13.778,-34.518,58.717)
C1': (-12.816,-32.386,59.143)
C5': (-15.319,-34.340,60.769)
O6: (-7.377,-32.606,61.700)
O4': (-14.000,-32.495,59.915)
C8: (-11.636,-32.833,61.354)
C2: (-8.532,-31.896,58.407)
C6: (-8.183,-32.442,60.774)
C5: (-9.597,-32.557,60.817)
C4: (-10.324,-32.331,59.667)
P: (-14.607,-35.521,63.017)
C4': (-14.753,-33.672,59.526)
C2': (-12.884,-33.464,58.064)
O2': (-13.406,-32.935,56.857)
N1: (-7.720,-32.101,59.502)
N2: (-7.928,-31.576,57.255)
N3: (-9.855,-31.999,58.436)
N7: (-10.440,-32.873,61.875)
N9: (-11.646,-32.511,60.017)
O5': (-14.291,-34.642,61.715)
O3': (-14.468,-35.315,57.752)
Image (generated by PyMOL):
PyMOL image
show in jmol