Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1418:A1566
Extra
PDB:
ATOM 1 O3' G A1417 -15.949 -8.288 34.570 1.00 1.39 O
ATOM 2 P G A1418 -16.981 -8.922 33.542 1.00 2.80 P
ATOM 3 OP1 G A1418 -16.891 -8.130 32.280 1.00 2.80 O
ATOM 4 OP2 G A1418 -18.299 -9.017 34.248 1.00 2.80 O
ATOM 5 O5' G A1418 -16.385 -10.367 33.324 1.00 2.80 O
ATOM 6 C5' G A1418 -15.095 -10.544 32.790 1.00 2.80 C
ATOM 7 C4' G A1418 -14.588 -11.895 33.133 1.00 2.80 C
ATOM 8 O4' G A1418 -14.682 -12.065 34.555 1.00 2.80 O
ATOM 9 C3' G A1418 -15.384 -13.044 32.572 1.00 2.80 C
ATOM 10 O3' G A1418 -15.007 -13.360 31.250 1.00 2.80 O
ATOM 11 C2' G A1418 -15.118 -14.160 33.570 1.00 2.80 C
ATOM 12 O2' G A1418 -13.874 -14.788 33.309 1.00 2.80 O
ATOM 13 C1' G A1418 -14.989 -13.385 34.869 1.00 2.80 C
ATOM 14 N9 G A1418 -16.212 -13.374 35.655 1.00 2.81 N
ATOM 15 C8 G A1418 -17.070 -12.318 35.684 1.00 2.81 C
ATOM 16 N7 G A1418 -18.051 -12.540 36.506 1.00 2.81 N
ATOM 17 C5 G A1418 -17.800 -13.804 37.053 1.00 2.81 C
ATOM 18 C6 G A1418 -18.539 -14.559 37.994 1.00 2.81 C
ATOM 19 O6 G A1418 -19.609 -14.260 38.567 1.00 2.81 O
ATOM 20 N1 G A1418 -17.904 -15.773 38.234 1.00 2.81 N
ATOM 21 C2 G A1418 -16.738 -16.212 37.648 1.00 2.81 C
ATOM 22 N2 G A1418 -16.288 -17.427 38.014 1.00 2.81 N
ATOM 23 N3 G A1418 -16.061 -15.516 36.765 1.00 2.81 N
ATOM 24 C4 G A1418 -16.646 -14.329 36.536 1.00 2.81 C
ATOM 25 P G A1419 -16.118 -13.758 30.167 1.00 0.01 P
ATOM 26 OP1 G A1419 -15.507 -13.571 28.824 1.00 0.01 O
ATOM 27 OP2 G A1419 -17.361 -13.015 30.513 1.00 0.01 O
ATOM 28 O5' G A1419 -16.309 -15.280 30.444 1.00 0.01 O
TER
ATOM 1 O3' A B1565 -16.448 -22.426 43.060 1.00 0.04 O
ATOM 2 P G B1566 -15.081 -21.580 43.108 1.00 0.01 P
ATOM 3 OP1 G B1566 -14.450 -21.885 44.402 1.00 0.01 O
ATOM 4 OP2 G B1566 -15.421 -20.159 42.791 1.00 0.01 O
ATOM 5 O5' G B1566 -14.209 -22.206 41.927 1.00 0.01 O
ATOM 6 C5' G B1566 -13.706 -23.527 42.014 1.00 0.01 C
ATOM 7 C4' G B1566 -13.085 -23.961 40.713 1.00 0.01 C
ATOM 8 O4' G B1566 -14.056 -23.861 39.628 1.00 0.01 O
ATOM 9 C3' G B1566 -11.930 -23.123 40.224 1.00 0.01 C
ATOM 10 O3' G B1566 -10.722 -23.416 40.881 1.00 0.01 O
ATOM 11 C2' G B1566 -11.918 -23.422 38.729 1.00 0.01 C
ATOM 12 O2' G B1566 -11.343 -24.671 38.456 1.00 0.01 O
ATOM 13 C1' G B1566 -13.404 -23.505 38.426 1.00 0.01 C
ATOM 14 N9 G B1566 -13.891 -22.202 37.988 1.00 0.01 N
ATOM 15 C8 G B1566 -14.438 -21.204 38.732 1.00 0.01 C
ATOM 16 N7 G B1566 -14.662 -20.133 38.022 1.00 0.01 N
ATOM 17 C5 G B1566 -14.177 -20.454 36.786 1.00 0.01 C
ATOM 18 C6 G B1566 -14.155 -19.669 35.648 1.00 0.01 C
ATOM 19 O6 G B1566 -14.578 -18.492 35.582 1.00 0.01 O
ATOM 20 N1 G B1566 -13.579 -20.384 34.582 1.00 0.01 N
ATOM 21 C2 G B1566 -13.094 -21.689 34.667 1.00 0.01 C
ATOM 22 N2 G B1566 -12.563 -22.278 33.564 1.00 0.01 N
ATOM 23 N3 G B1566 -13.121 -22.392 35.773 1.00 0.01 N
ATOM 24 C4 G B1566 -13.678 -21.706 36.756 1.00 0.01 C
ATOM 25 P C B1567 -9.946 -22.258 41.684 1.00 1.83 P
ATOM 26 OP1 C B1567 -8.675 -22.866 42.172 1.00 1.83 O
ATOM 27 OP2 C B1567 -10.895 -21.673 42.675 1.00 1.83 O
ATOM 28 O5' C B1567 -9.631 -21.206 40.541 1.00 1.83 O
TER
ATOM 2 P G A1418 -16.981 -8.922 33.542 1.00 2.80 P
ATOM 3 OP1 G A1418 -16.891 -8.130 32.280 1.00 2.80 O
ATOM 4 OP2 G A1418 -18.299 -9.017 34.248 1.00 2.80 O
ATOM 5 O5' G A1418 -16.385 -10.367 33.324 1.00 2.80 O
ATOM 6 C5' G A1418 -15.095 -10.544 32.790 1.00 2.80 C
ATOM 7 C4' G A1418 -14.588 -11.895 33.133 1.00 2.80 C
ATOM 8 O4' G A1418 -14.682 -12.065 34.555 1.00 2.80 O
ATOM 9 C3' G A1418 -15.384 -13.044 32.572 1.00 2.80 C
ATOM 10 O3' G A1418 -15.007 -13.360 31.250 1.00 2.80 O
ATOM 11 C2' G A1418 -15.118 -14.160 33.570 1.00 2.80 C
ATOM 12 O2' G A1418 -13.874 -14.788 33.309 1.00 2.80 O
ATOM 13 C1' G A1418 -14.989 -13.385 34.869 1.00 2.80 C
ATOM 14 N9 G A1418 -16.212 -13.374 35.655 1.00 2.81 N
ATOM 15 C8 G A1418 -17.070 -12.318 35.684 1.00 2.81 C
ATOM 16 N7 G A1418 -18.051 -12.540 36.506 1.00 2.81 N
ATOM 17 C5 G A1418 -17.800 -13.804 37.053 1.00 2.81 C
ATOM 18 C6 G A1418 -18.539 -14.559 37.994 1.00 2.81 C
ATOM 19 O6 G A1418 -19.609 -14.260 38.567 1.00 2.81 O
ATOM 20 N1 G A1418 -17.904 -15.773 38.234 1.00 2.81 N
ATOM 21 C2 G A1418 -16.738 -16.212 37.648 1.00 2.81 C
ATOM 22 N2 G A1418 -16.288 -17.427 38.014 1.00 2.81 N
ATOM 23 N3 G A1418 -16.061 -15.516 36.765 1.00 2.81 N
ATOM 24 C4 G A1418 -16.646 -14.329 36.536 1.00 2.81 C
ATOM 25 P G A1419 -16.118 -13.758 30.167 1.00 0.01 P
ATOM 26 OP1 G A1419 -15.507 -13.571 28.824 1.00 0.01 O
ATOM 27 OP2 G A1419 -17.361 -13.015 30.513 1.00 0.01 O
ATOM 28 O5' G A1419 -16.309 -15.280 30.444 1.00 0.01 O
TER
ATOM 1 O3' A B1565 -16.448 -22.426 43.060 1.00 0.04 O
ATOM 2 P G B1566 -15.081 -21.580 43.108 1.00 0.01 P
ATOM 3 OP1 G B1566 -14.450 -21.885 44.402 1.00 0.01 O
ATOM 4 OP2 G B1566 -15.421 -20.159 42.791 1.00 0.01 O
ATOM 5 O5' G B1566 -14.209 -22.206 41.927 1.00 0.01 O
ATOM 6 C5' G B1566 -13.706 -23.527 42.014 1.00 0.01 C
ATOM 7 C4' G B1566 -13.085 -23.961 40.713 1.00 0.01 C
ATOM 8 O4' G B1566 -14.056 -23.861 39.628 1.00 0.01 O
ATOM 9 C3' G B1566 -11.930 -23.123 40.224 1.00 0.01 C
ATOM 10 O3' G B1566 -10.722 -23.416 40.881 1.00 0.01 O
ATOM 11 C2' G B1566 -11.918 -23.422 38.729 1.00 0.01 C
ATOM 12 O2' G B1566 -11.343 -24.671 38.456 1.00 0.01 O
ATOM 13 C1' G B1566 -13.404 -23.505 38.426 1.00 0.01 C
ATOM 14 N9 G B1566 -13.891 -22.202 37.988 1.00 0.01 N
ATOM 15 C8 G B1566 -14.438 -21.204 38.732 1.00 0.01 C
ATOM 16 N7 G B1566 -14.662 -20.133 38.022 1.00 0.01 N
ATOM 17 C5 G B1566 -14.177 -20.454 36.786 1.00 0.01 C
ATOM 18 C6 G B1566 -14.155 -19.669 35.648 1.00 0.01 C
ATOM 19 O6 G B1566 -14.578 -18.492 35.582 1.00 0.01 O
ATOM 20 N1 G B1566 -13.579 -20.384 34.582 1.00 0.01 N
ATOM 21 C2 G B1566 -13.094 -21.689 34.667 1.00 0.01 C
ATOM 22 N2 G B1566 -12.563 -22.278 33.564 1.00 0.01 N
ATOM 23 N3 G B1566 -13.121 -22.392 35.773 1.00 0.01 N
ATOM 24 C4 G B1566 -13.678 -21.706 36.756 1.00 0.01 C
ATOM 25 P C B1567 -9.946 -22.258 41.684 1.00 1.83 P
ATOM 26 OP1 C B1567 -8.675 -22.866 42.172 1.00 1.83 O
ATOM 27 OP2 C B1567 -10.895 -21.673 42.675 1.00 1.83 O
ATOM 28 O5' C B1567 -9.631 -21.206 40.541 1.00 1.83 O
TER
Atoms:
OP1: (-16.891,-8.130,32.280)
OP2: (-18.299,-9.017,34.248)
C3': (-15.384,-13.044,32.572)
C1': (-14.989,-13.385,34.869)
C5': (-15.095,-10.544,32.790)
O6: (-19.609,-14.260,38.567)
O4': (-14.682,-12.065,34.555)
C8: (-17.070,-12.318,35.684)
C2: (-16.738,-16.212,37.648)
C6: (-18.539,-14.559,37.994)
C5: (-17.800,-13.804,37.053)
C4: (-16.646,-14.329,36.536)
P: (-16.981,-8.922,33.542)
C4': (-14.588,-11.895,33.133)
C2': (-15.118,-14.160,33.570)
O2': (-13.874,-14.788,33.309)
N1: (-17.904,-15.773,38.234)
N2: (-16.288,-17.427,38.014)
N3: (-16.061,-15.516,36.765)
N7: (-18.051,-12.540,36.506)
N9: (-16.212,-13.374,35.655)
O5': (-16.385,-10.367,33.324)
O3': (-15.007,-13.360,31.250)
OP2: (-18.299,-9.017,34.248)
C3': (-15.384,-13.044,32.572)
C1': (-14.989,-13.385,34.869)
C5': (-15.095,-10.544,32.790)
O6: (-19.609,-14.260,38.567)
O4': (-14.682,-12.065,34.555)
C8: (-17.070,-12.318,35.684)
C2: (-16.738,-16.212,37.648)
C6: (-18.539,-14.559,37.994)
C5: (-17.800,-13.804,37.053)
C4: (-16.646,-14.329,36.536)
P: (-16.981,-8.922,33.542)
C4': (-14.588,-11.895,33.133)
C2': (-15.118,-14.160,33.570)
O2': (-13.874,-14.788,33.309)
N1: (-17.904,-15.773,38.234)
N2: (-16.288,-17.427,38.014)
N3: (-16.061,-15.516,36.765)
N7: (-18.051,-12.540,36.506)
N9: (-16.212,-13.374,35.655)
O5': (-16.385,-10.367,33.324)
O3': (-15.007,-13.360,31.250)
OP1: (-14.450,-21.885,44.402)
OP2: (-15.421,-20.159,42.791)
C3': (-11.930,-23.123,40.224)
C1': (-13.404,-23.505,38.426)
C5': (-13.706,-23.527,42.014)
O6: (-14.578,-18.492,35.582)
O4': (-14.056,-23.861,39.628)
C8: (-14.438,-21.204,38.732)
C2: (-13.094,-21.689,34.667)
C6: (-14.155,-19.669,35.648)
C5: (-14.177,-20.454,36.786)
C4: (-13.678,-21.706,36.756)
P: (-15.081,-21.580,43.108)
C4': (-13.085,-23.961,40.713)
C2': (-11.918,-23.422,38.729)
O2': (-11.343,-24.671,38.456)
N1: (-13.579,-20.384,34.582)
N2: (-12.563,-22.278,33.564)
N3: (-13.121,-22.392,35.773)
N7: (-14.662,-20.133,38.022)
N9: (-13.891,-22.202,37.988)
O5': (-14.209,-22.206,41.927)
O3': (-10.722,-23.416,40.881)
OP2: (-15.421,-20.159,42.791)
C3': (-11.930,-23.123,40.224)
C1': (-13.404,-23.505,38.426)
C5': (-13.706,-23.527,42.014)
O6: (-14.578,-18.492,35.582)
O4': (-14.056,-23.861,39.628)
C8: (-14.438,-21.204,38.732)
C2: (-13.094,-21.689,34.667)
C6: (-14.155,-19.669,35.648)
C5: (-14.177,-20.454,36.786)
C4: (-13.678,-21.706,36.756)
P: (-15.081,-21.580,43.108)
C4': (-13.085,-23.961,40.713)
C2': (-11.918,-23.422,38.729)
O2': (-11.343,-24.671,38.456)
N1: (-13.579,-20.384,34.582)
N2: (-12.563,-22.278,33.564)
N3: (-13.121,-22.392,35.773)
N7: (-14.662,-20.133,38.022)
N9: (-13.891,-22.202,37.988)
O5': (-14.209,-22.206,41.927)
O3': (-10.722,-23.416,40.881)
Image (generated by PyMOL):