Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SD3:A53:A23
Extra
PDB:
ATOM 1 O3' C A 52 15.216 13.053 27.747 1.00 56.40 O
ATOM 2 P G A 53 14.424 14.242 27.008 1.00 47.07 P
ATOM 3 OP1 G A 53 15.442 15.170 26.468 1.00 50.07 O
ATOM 4 OP2 G A 53 13.417 14.766 27.965 1.00 44.84 O
ATOM 5 O5' G A 53 13.689 13.486 25.815 1.00 55.60 O
ATOM 6 C5' G A 53 14.407 12.637 24.932 1.00 52.90 C
ATOM 7 C4' G A 53 13.475 11.860 24.038 1.00 50.77 C
ATOM 8 O4' G A 53 12.711 10.907 24.826 1.00 46.33 O
ATOM 9 C3' G A 53 12.417 12.678 23.317 1.00 51.90 C
ATOM 10 O3' G A 53 12.913 13.315 22.154 1.00 56.85 O
ATOM 11 C2' G A 53 11.330 11.649 23.036 1.00 50.04 C
ATOM 12 O2' G A 53 11.672 10.853 21.912 1.00 49.47 O
ATOM 13 C1' G A 53 11.409 10.774 24.292 1.00 47.72 C
ATOM 14 N9 G A 53 10.432 11.193 25.318 1.00 48.19 N
ATOM 15 C8 G A 53 10.595 12.176 26.265 1.00 48.46 C
ATOM 16 N7 G A 53 9.553 12.330 27.037 1.00 48.12 N
ATOM 17 C5 G A 53 8.639 11.396 26.571 1.00 47.25 C
ATOM 18 C6 G A 53 7.323 11.097 27.018 1.00 47.54 C
ATOM 19 O6 G A 53 6.683 11.616 27.942 1.00 47.37 O
ATOM 20 N1 G A 53 6.745 10.077 26.269 1.00 48.70 N
ATOM 21 C2 G A 53 7.354 9.427 25.224 1.00 48.75 C
ATOM 22 N2 G A 53 6.629 8.471 24.627 1.00 48.33 N
ATOM 23 N3 G A 53 8.580 9.695 24.797 1.00 48.77 N
ATOM 24 C4 G A 53 9.165 10.685 25.511 1.00 48.55 C
ATOM 25 P A A 54 12.371 14.766 21.733 1.00 54.59 P
ATOM 26 OP1 A A 54 13.543 15.672 21.679 1.00 57.49 O
ATOM 27 OP2 A A 54 11.254 15.100 22.648 1.00 55.55 O
ATOM 28 O5' A A 54 11.812 14.516 20.267 1.00 57.49 O
TER
ATOM 1 O3' A B 22 0.695 4.286 26.061 1.00 31.52 O
ATOM 2 P G B 23 1.936 3.447 26.636 1.00 35.27 P
ATOM 3 OP1 G B 23 1.377 2.426 27.559 1.00 39.41 O
ATOM 4 OP2 G B 23 2.915 4.425 27.164 1.00 36.58 O
ATOM 5 O5' G B 23 2.525 2.740 25.336 1.00 32.53 O
ATOM 6 C5' G B 23 1.784 1.744 24.647 1.00 33.05 C
ATOM 7 C4' G B 23 2.407 1.411 23.312 1.00 34.77 C
ATOM 8 O4' G B 23 2.550 2.620 22.518 1.00 33.55 O
ATOM 9 C3' G B 23 3.814 0.831 23.355 1.00 33.40 C
ATOM 10 O3' G B 23 3.834 -0.558 23.637 1.00 34.32 O
ATOM 11 C2' G B 23 4.355 1.177 21.975 1.00 30.29 C
ATOM 12 O2' G B 23 3.842 0.283 20.998 1.00 28.87 O
ATOM 13 C1' G B 23 3.731 2.554 21.746 1.00 31.56 C
ATOM 14 N9 G B 23 4.630 3.640 22.175 1.00 31.13 N
ATOM 15 C8 G B 23 4.571 4.327 23.361 1.00 32.63 C
ATOM 16 N7 G B 23 5.501 5.238 23.473 1.00 33.00 N
ATOM 17 C5 G B 23 6.218 5.139 22.291 1.00 30.61 C
ATOM 18 C6 G B 23 7.344 5.875 21.846 1.00 28.68 C
ATOM 19 O6 G B 23 7.948 6.785 22.429 1.00 26.61 O
ATOM 20 N1 G B 23 7.760 5.457 20.586 1.00 28.36 N
ATOM 21 C2 G B 23 7.169 4.464 19.845 1.00 28.95 C
ATOM 22 N2 G B 23 7.725 4.221 18.649 1.00 28.14 N
ATOM 23 N3 G B 23 6.115 3.767 20.249 1.00 29.01 N
ATOM 24 C4 G B 23 5.696 4.157 21.475 1.00 30.33 C
ATOM 25 P C B 24 5.071 -1.206 24.435 1.00 36.67 P
ATOM 26 OP1 C B 24 4.848 -2.671 24.464 1.00 39.74 O
ATOM 27 OP2 C B 24 5.190 -0.479 25.719 1.00 38.30 O
ATOM 28 O5' C B 24 6.320 -0.866 23.504 1.00 23.12 O
TER
ATOM 2 P G A 53 14.424 14.242 27.008 1.00 47.07 P
ATOM 3 OP1 G A 53 15.442 15.170 26.468 1.00 50.07 O
ATOM 4 OP2 G A 53 13.417 14.766 27.965 1.00 44.84 O
ATOM 5 O5' G A 53 13.689 13.486 25.815 1.00 55.60 O
ATOM 6 C5' G A 53 14.407 12.637 24.932 1.00 52.90 C
ATOM 7 C4' G A 53 13.475 11.860 24.038 1.00 50.77 C
ATOM 8 O4' G A 53 12.711 10.907 24.826 1.00 46.33 O
ATOM 9 C3' G A 53 12.417 12.678 23.317 1.00 51.90 C
ATOM 10 O3' G A 53 12.913 13.315 22.154 1.00 56.85 O
ATOM 11 C2' G A 53 11.330 11.649 23.036 1.00 50.04 C
ATOM 12 O2' G A 53 11.672 10.853 21.912 1.00 49.47 O
ATOM 13 C1' G A 53 11.409 10.774 24.292 1.00 47.72 C
ATOM 14 N9 G A 53 10.432 11.193 25.318 1.00 48.19 N
ATOM 15 C8 G A 53 10.595 12.176 26.265 1.00 48.46 C
ATOM 16 N7 G A 53 9.553 12.330 27.037 1.00 48.12 N
ATOM 17 C5 G A 53 8.639 11.396 26.571 1.00 47.25 C
ATOM 18 C6 G A 53 7.323 11.097 27.018 1.00 47.54 C
ATOM 19 O6 G A 53 6.683 11.616 27.942 1.00 47.37 O
ATOM 20 N1 G A 53 6.745 10.077 26.269 1.00 48.70 N
ATOM 21 C2 G A 53 7.354 9.427 25.224 1.00 48.75 C
ATOM 22 N2 G A 53 6.629 8.471 24.627 1.00 48.33 N
ATOM 23 N3 G A 53 8.580 9.695 24.797 1.00 48.77 N
ATOM 24 C4 G A 53 9.165 10.685 25.511 1.00 48.55 C
ATOM 25 P A A 54 12.371 14.766 21.733 1.00 54.59 P
ATOM 26 OP1 A A 54 13.543 15.672 21.679 1.00 57.49 O
ATOM 27 OP2 A A 54 11.254 15.100 22.648 1.00 55.55 O
ATOM 28 O5' A A 54 11.812 14.516 20.267 1.00 57.49 O
TER
ATOM 1 O3' A B 22 0.695 4.286 26.061 1.00 31.52 O
ATOM 2 P G B 23 1.936 3.447 26.636 1.00 35.27 P
ATOM 3 OP1 G B 23 1.377 2.426 27.559 1.00 39.41 O
ATOM 4 OP2 G B 23 2.915 4.425 27.164 1.00 36.58 O
ATOM 5 O5' G B 23 2.525 2.740 25.336 1.00 32.53 O
ATOM 6 C5' G B 23 1.784 1.744 24.647 1.00 33.05 C
ATOM 7 C4' G B 23 2.407 1.411 23.312 1.00 34.77 C
ATOM 8 O4' G B 23 2.550 2.620 22.518 1.00 33.55 O
ATOM 9 C3' G B 23 3.814 0.831 23.355 1.00 33.40 C
ATOM 10 O3' G B 23 3.834 -0.558 23.637 1.00 34.32 O
ATOM 11 C2' G B 23 4.355 1.177 21.975 1.00 30.29 C
ATOM 12 O2' G B 23 3.842 0.283 20.998 1.00 28.87 O
ATOM 13 C1' G B 23 3.731 2.554 21.746 1.00 31.56 C
ATOM 14 N9 G B 23 4.630 3.640 22.175 1.00 31.13 N
ATOM 15 C8 G B 23 4.571 4.327 23.361 1.00 32.63 C
ATOM 16 N7 G B 23 5.501 5.238 23.473 1.00 33.00 N
ATOM 17 C5 G B 23 6.218 5.139 22.291 1.00 30.61 C
ATOM 18 C6 G B 23 7.344 5.875 21.846 1.00 28.68 C
ATOM 19 O6 G B 23 7.948 6.785 22.429 1.00 26.61 O
ATOM 20 N1 G B 23 7.760 5.457 20.586 1.00 28.36 N
ATOM 21 C2 G B 23 7.169 4.464 19.845 1.00 28.95 C
ATOM 22 N2 G B 23 7.725 4.221 18.649 1.00 28.14 N
ATOM 23 N3 G B 23 6.115 3.767 20.249 1.00 29.01 N
ATOM 24 C4 G B 23 5.696 4.157 21.475 1.00 30.33 C
ATOM 25 P C B 24 5.071 -1.206 24.435 1.00 36.67 P
ATOM 26 OP1 C B 24 4.848 -2.671 24.464 1.00 39.74 O
ATOM 27 OP2 C B 24 5.190 -0.479 25.719 1.00 38.30 O
ATOM 28 O5' C B 24 6.320 -0.866 23.504 1.00 23.12 O
TER
Atoms:
OP1: (15.442,15.170,26.468)
OP2: (13.417,14.766,27.965)
C3': (12.417,12.678,23.317)
C1': (11.409,10.774,24.292)
C5': (14.407,12.637,24.932)
O6: (6.683,11.616,27.942)
O4': (12.711,10.907,24.826)
C8: (10.595,12.176,26.265)
C2: (7.354,9.427,25.224)
C6: (7.323,11.097,27.018)
C5: (8.639,11.396,26.571)
C4: (9.165,10.685,25.511)
P: (14.424,14.242,27.008)
C4': (13.475,11.860,24.038)
C2': (11.330,11.649,23.036)
O2': (11.672,10.853,21.912)
N1: (6.745,10.077,26.269)
N2: (6.629,8.471,24.627)
N3: (8.580,9.695,24.797)
N7: (9.553,12.330,27.037)
N9: (10.432,11.193,25.318)
O5': (13.689,13.486,25.815)
O3': (12.913,13.315,22.154)
OP2: (13.417,14.766,27.965)
C3': (12.417,12.678,23.317)
C1': (11.409,10.774,24.292)
C5': (14.407,12.637,24.932)
O6: (6.683,11.616,27.942)
O4': (12.711,10.907,24.826)
C8: (10.595,12.176,26.265)
C2: (7.354,9.427,25.224)
C6: (7.323,11.097,27.018)
C5: (8.639,11.396,26.571)
C4: (9.165,10.685,25.511)
P: (14.424,14.242,27.008)
C4': (13.475,11.860,24.038)
C2': (11.330,11.649,23.036)
O2': (11.672,10.853,21.912)
N1: (6.745,10.077,26.269)
N2: (6.629,8.471,24.627)
N3: (8.580,9.695,24.797)
N7: (9.553,12.330,27.037)
N9: (10.432,11.193,25.318)
O5': (13.689,13.486,25.815)
O3': (12.913,13.315,22.154)
OP1: (1.377,2.426,27.559)
OP2: (2.915,4.425,27.164)
C3': (3.814,0.831,23.355)
C1': (3.731,2.554,21.746)
C5': (1.784,1.744,24.647)
O6: (7.948,6.785,22.429)
O4': (2.550,2.620,22.518)
C8: (4.571,4.327,23.361)
C2: (7.169,4.464,19.845)
C6: (7.344,5.875,21.846)
C5: (6.218,5.139,22.291)
C4: (5.696,4.157,21.475)
P: (1.936,3.447,26.636)
C4': (2.407,1.411,23.312)
C2': (4.355,1.177,21.975)
O2': (3.842,0.283,20.998)
N1: (7.760,5.457,20.586)
N2: (7.725,4.221,18.649)
N3: (6.115,3.767,20.249)
N7: (5.501,5.238,23.473)
N9: (4.630,3.640,22.175)
O5': (2.525,2.740,25.336)
O3': (3.834,-0.558,23.637)
OP2: (2.915,4.425,27.164)
C3': (3.814,0.831,23.355)
C1': (3.731,2.554,21.746)
C5': (1.784,1.744,24.647)
O6: (7.948,6.785,22.429)
O4': (2.550,2.620,22.518)
C8: (4.571,4.327,23.361)
C2: (7.169,4.464,19.845)
C6: (7.344,5.875,21.846)
C5: (6.218,5.139,22.291)
C4: (5.696,4.157,21.475)
P: (1.936,3.447,26.636)
C4': (2.407,1.411,23.312)
C2': (4.355,1.177,21.975)
O2': (3.842,0.283,20.998)
N1: (7.760,5.457,20.586)
N2: (7.725,4.221,18.649)
N3: (6.115,3.767,20.249)
N7: (5.501,5.238,23.473)
N9: (4.630,3.640,22.175)
O5': (2.525,2.740,25.336)
O3': (3.834,-0.558,23.637)
Image (generated by PyMOL):