Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:A234:A253
Extra
PDB:
ATOM 1 O3' C A 233 92.894 111.693 -9.092 1.00 71.67 O
ATOM 2 P G A 234 94.385 112.267 -9.106 1.00 74.79 P
ATOM 3 OP1 G A 234 94.745 112.554 -10.531 1.00 75.44 O
ATOM 4 OP2 G A 234 95.230 111.324 -8.306 1.00 72.97 O
ATOM 5 O5' G A 234 94.203 113.650 -8.326 1.00 73.92 O
ATOM 6 C5' G A 234 93.042 114.482 -8.583 1.00 73.03 C
ATOM 7 C4' G A 234 93.027 115.670 -7.657 1.00 73.09 C
ATOM 8 O4' G A 234 92.804 115.202 -6.296 1.00 73.82 O
ATOM 9 C3' G A 234 94.330 116.452 -7.627 1.00 73.23 C
ATOM 10 O3' G A 234 94.113 117.840 -7.442 1.00 73.43 O
ATOM 11 C2' G A 234 95.053 115.861 -6.430 1.00 73.34 C
ATOM 12 O2' G A 234 95.999 116.770 -5.906 1.00 73.63 O
ATOM 13 C1' G A 234 93.890 115.580 -5.474 1.00 73.65 C
ATOM 14 N9 G A 234 94.167 114.494 -4.532 1.00 73.43 N
ATOM 15 C8 G A 234 94.728 113.270 -4.829 1.00 73.50 C
ATOM 16 N7 G A 234 94.977 112.547 -3.770 1.00 73.68 N
ATOM 17 C5 G A 234 94.538 113.326 -2.706 1.00 73.72 C
ATOM 18 C6 G A 234 94.592 113.082 -1.301 1.00 73.72 C
ATOM 19 O6 G A 234 95.104 112.128 -0.701 1.00 73.29 O
ATOM 20 N1 G A 234 93.994 114.110 -0.582 1.00 73.97 N
ATOM 21 C2 G A 234 93.440 115.242 -1.130 1.00 74.48 C
ATOM 22 N2 G A 234 92.882 116.102 -0.257 1.00 75.43 N
ATOM 23 N3 G A 234 93.424 115.508 -2.434 1.00 74.00 N
ATOM 24 C4 G A 234 93.986 114.512 -3.159 1.00 73.76 C
ATOM 25 P A A 235 94.755 118.869 -8.493 1.00 75.78 P
ATOM 26 OP1 A A 235 94.374 118.330 -9.823 1.00 76.85 O
ATOM 27 OP2 A A 235 96.189 119.128 -8.190 1.00 74.89 O
ATOM 28 O5' A A 235 93.959 120.226 -8.259 1.00 74.17 O
TER
ATOM 1 O3' G B 252 91.602 119.464 3.833 1.00 62.54 O
ATOM 2 P U B 253 90.325 119.293 4.798 1.00 59.84 P
ATOM 3 OP1 U B 253 90.723 119.858 6.108 1.00 60.87 O
ATOM 4 OP2 U B 253 89.842 117.894 4.740 1.00 60.66 O
ATOM 5 O5' U B 253 89.223 120.238 4.135 1.00 60.23 O
ATOM 6 C5' U B 253 89.169 121.658 4.434 1.00 60.99 C
ATOM 7 C4' U B 253 88.710 122.453 3.221 1.00 62.21 C
ATOM 8 O4' U B 253 89.807 122.622 2.279 1.00 64.51 O
ATOM 9 C3' U B 253 87.591 121.834 2.404 1.00 62.50 C
ATOM 10 O3' U B 253 86.303 122.034 3.004 1.00 60.59 O
ATOM 11 C2' U B 253 87.791 122.464 1.021 1.00 62.83 C
ATOM 12 O2' U B 253 87.252 123.762 0.859 1.00 62.45 O
ATOM 13 C1' U B 253 89.320 122.546 0.940 1.00 64.17 C
ATOM 14 N1 U B 253 89.973 121.401 0.267 1.00 65.76 N
ATOM 15 C2 U B 253 89.897 121.315 -1.122 1.00 65.94 C
ATOM 16 O2 U B 253 89.334 122.147 -1.818 1.00 67.22 O
ATOM 17 N3 U B 253 90.509 120.213 -1.669 1.00 65.96 N
ATOM 18 C4 U B 253 91.169 119.202 -1.001 1.00 66.30 C
ATOM 19 O4 U B 253 91.486 118.184 -1.622 1.00 67.40 O
ATOM 20 C5 U B 253 91.232 119.368 0.420 1.00 65.85 C
ATOM 21 C6 U B 253 90.645 120.429 0.992 1.00 65.69 C
ATOM 22 P G B 254 85.240 120.811 3.057 1.00 60.11 P
ATOM 23 OP1 G B 254 83.927 121.394 3.467 1.00 57.87 O
ATOM 24 OP2 G B 254 85.795 119.638 3.797 1.00 57.03 O
ATOM 25 O5' G B 254 85.104 120.372 1.533 1.00 60.96 O
TER
ATOM 2 P G A 234 94.385 112.267 -9.106 1.00 74.79 P
ATOM 3 OP1 G A 234 94.745 112.554 -10.531 1.00 75.44 O
ATOM 4 OP2 G A 234 95.230 111.324 -8.306 1.00 72.97 O
ATOM 5 O5' G A 234 94.203 113.650 -8.326 1.00 73.92 O
ATOM 6 C5' G A 234 93.042 114.482 -8.583 1.00 73.03 C
ATOM 7 C4' G A 234 93.027 115.670 -7.657 1.00 73.09 C
ATOM 8 O4' G A 234 92.804 115.202 -6.296 1.00 73.82 O
ATOM 9 C3' G A 234 94.330 116.452 -7.627 1.00 73.23 C
ATOM 10 O3' G A 234 94.113 117.840 -7.442 1.00 73.43 O
ATOM 11 C2' G A 234 95.053 115.861 -6.430 1.00 73.34 C
ATOM 12 O2' G A 234 95.999 116.770 -5.906 1.00 73.63 O
ATOM 13 C1' G A 234 93.890 115.580 -5.474 1.00 73.65 C
ATOM 14 N9 G A 234 94.167 114.494 -4.532 1.00 73.43 N
ATOM 15 C8 G A 234 94.728 113.270 -4.829 1.00 73.50 C
ATOM 16 N7 G A 234 94.977 112.547 -3.770 1.00 73.68 N
ATOM 17 C5 G A 234 94.538 113.326 -2.706 1.00 73.72 C
ATOM 18 C6 G A 234 94.592 113.082 -1.301 1.00 73.72 C
ATOM 19 O6 G A 234 95.104 112.128 -0.701 1.00 73.29 O
ATOM 20 N1 G A 234 93.994 114.110 -0.582 1.00 73.97 N
ATOM 21 C2 G A 234 93.440 115.242 -1.130 1.00 74.48 C
ATOM 22 N2 G A 234 92.882 116.102 -0.257 1.00 75.43 N
ATOM 23 N3 G A 234 93.424 115.508 -2.434 1.00 74.00 N
ATOM 24 C4 G A 234 93.986 114.512 -3.159 1.00 73.76 C
ATOM 25 P A A 235 94.755 118.869 -8.493 1.00 75.78 P
ATOM 26 OP1 A A 235 94.374 118.330 -9.823 1.00 76.85 O
ATOM 27 OP2 A A 235 96.189 119.128 -8.190 1.00 74.89 O
ATOM 28 O5' A A 235 93.959 120.226 -8.259 1.00 74.17 O
TER
ATOM 1 O3' G B 252 91.602 119.464 3.833 1.00 62.54 O
ATOM 2 P U B 253 90.325 119.293 4.798 1.00 59.84 P
ATOM 3 OP1 U B 253 90.723 119.858 6.108 1.00 60.87 O
ATOM 4 OP2 U B 253 89.842 117.894 4.740 1.00 60.66 O
ATOM 5 O5' U B 253 89.223 120.238 4.135 1.00 60.23 O
ATOM 6 C5' U B 253 89.169 121.658 4.434 1.00 60.99 C
ATOM 7 C4' U B 253 88.710 122.453 3.221 1.00 62.21 C
ATOM 8 O4' U B 253 89.807 122.622 2.279 1.00 64.51 O
ATOM 9 C3' U B 253 87.591 121.834 2.404 1.00 62.50 C
ATOM 10 O3' U B 253 86.303 122.034 3.004 1.00 60.59 O
ATOM 11 C2' U B 253 87.791 122.464 1.021 1.00 62.83 C
ATOM 12 O2' U B 253 87.252 123.762 0.859 1.00 62.45 O
ATOM 13 C1' U B 253 89.320 122.546 0.940 1.00 64.17 C
ATOM 14 N1 U B 253 89.973 121.401 0.267 1.00 65.76 N
ATOM 15 C2 U B 253 89.897 121.315 -1.122 1.00 65.94 C
ATOM 16 O2 U B 253 89.334 122.147 -1.818 1.00 67.22 O
ATOM 17 N3 U B 253 90.509 120.213 -1.669 1.00 65.96 N
ATOM 18 C4 U B 253 91.169 119.202 -1.001 1.00 66.30 C
ATOM 19 O4 U B 253 91.486 118.184 -1.622 1.00 67.40 O
ATOM 20 C5 U B 253 91.232 119.368 0.420 1.00 65.85 C
ATOM 21 C6 U B 253 90.645 120.429 0.992 1.00 65.69 C
ATOM 22 P G B 254 85.240 120.811 3.057 1.00 60.11 P
ATOM 23 OP1 G B 254 83.927 121.394 3.467 1.00 57.87 O
ATOM 24 OP2 G B 254 85.795 119.638 3.797 1.00 57.03 O
ATOM 25 O5' G B 254 85.104 120.372 1.533 1.00 60.96 O
TER
Atoms:
OP1: (94.745,112.554,-10.531)
OP2: (95.230,111.324,-8.306)
C3': (94.330,116.452,-7.627)
C1': (93.890,115.580,-5.474)
C5': (93.042,114.482,-8.583)
O6: (95.104,112.128,-0.701)
O4': (92.804,115.202,-6.296)
C8: (94.728,113.270,-4.829)
C2: (93.440,115.242,-1.130)
C6: (94.592,113.082,-1.301)
C5: (94.538,113.326,-2.706)
C4: (93.986,114.512,-3.159)
P: (94.385,112.267,-9.106)
C4': (93.027,115.670,-7.657)
C2': (95.053,115.861,-6.430)
O2': (95.999,116.770,-5.906)
N1: (93.994,114.110,-0.582)
N2: (92.882,116.102,-0.257)
N3: (93.424,115.508,-2.434)
N7: (94.977,112.547,-3.770)
N9: (94.167,114.494,-4.532)
O5': (94.203,113.650,-8.326)
O3': (94.113,117.840,-7.442)
OP2: (95.230,111.324,-8.306)
C3': (94.330,116.452,-7.627)
C1': (93.890,115.580,-5.474)
C5': (93.042,114.482,-8.583)
O6: (95.104,112.128,-0.701)
O4': (92.804,115.202,-6.296)
C8: (94.728,113.270,-4.829)
C2: (93.440,115.242,-1.130)
C6: (94.592,113.082,-1.301)
C5: (94.538,113.326,-2.706)
C4: (93.986,114.512,-3.159)
P: (94.385,112.267,-9.106)
C4': (93.027,115.670,-7.657)
C2': (95.053,115.861,-6.430)
O2': (95.999,116.770,-5.906)
N1: (93.994,114.110,-0.582)
N2: (92.882,116.102,-0.257)
N3: (93.424,115.508,-2.434)
N7: (94.977,112.547,-3.770)
N9: (94.167,114.494,-4.532)
O5': (94.203,113.650,-8.326)
O3': (94.113,117.840,-7.442)
C4: (91.169,119.202,-1.001)
N3: (90.509,120.213,-1.669)
OP1: (90.723,119.858,6.108)
OP2: (89.842,117.894,4.740)
C2: (89.897,121.315,-1.122)
C1': (89.320,122.546,0.940)
C3': (87.591,121.834,2.404)
O5': (89.223,120.238,4.135)
O4': (89.807,122.622,2.279)
C5': (89.169,121.658,4.434)
P: (90.325,119.293,4.798)
C4': (88.710,122.453,3.221)
C2': (87.791,122.464,1.021)
O2': (87.252,123.762,0.859)
N1: (89.973,121.401,0.267)
O4: (91.486,118.184,-1.622)
O2: (89.334,122.147,-1.818)
C6: (90.645,120.429,0.992)
C5: (91.232,119.368,0.420)
O3': (86.303,122.034,3.004)
N3: (90.509,120.213,-1.669)
OP1: (90.723,119.858,6.108)
OP2: (89.842,117.894,4.740)
C2: (89.897,121.315,-1.122)
C1': (89.320,122.546,0.940)
C3': (87.591,121.834,2.404)
O5': (89.223,120.238,4.135)
O4': (89.807,122.622,2.279)
C5': (89.169,121.658,4.434)
P: (90.325,119.293,4.798)
C4': (88.710,122.453,3.221)
C2': (87.791,122.464,1.021)
O2': (87.252,123.762,0.859)
N1: (89.973,121.401,0.267)
O4: (91.486,118.184,-1.622)
O2: (89.334,122.147,-1.818)
C6: (90.645,120.429,0.992)
C5: (91.232,119.368,0.420)
O3': (86.303,122.034,3.004)
Image (generated by PyMOL):