Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A234:A253
Extra
PDB:
ATOM 1 O3' C A 233 93.145 111.668 -8.968 1.00 69.47 O
ATOM 2 P G A 234 94.636 112.259 -8.987 1.00 71.55 P
ATOM 3 OP1 G A 234 95.009 112.560 -10.401 1.00 72.86 O
ATOM 4 OP2 G A 234 95.488 111.330 -8.183 1.00 71.05 O
ATOM 5 O5' G A 234 94.442 113.649 -8.235 1.00 70.70 O
ATOM 6 C5' G A 234 93.251 114.425 -8.475 1.00 69.67 C
ATOM 7 C4' G A 234 93.193 115.595 -7.533 1.00 69.31 C
ATOM 8 O4' G A 234 92.986 115.106 -6.173 1.00 68.94 O
ATOM 9 C3' G A 234 94.489 116.395 -7.509 1.00 68.46 C
ATOM 10 O3' G A 234 94.253 117.791 -7.361 1.00 68.30 O
ATOM 11 C2' G A 234 95.228 115.796 -6.321 1.00 68.43 C
ATOM 12 O2' G A 234 96.185 116.682 -5.779 1.00 68.43 O
ATOM 13 C1' G A 234 94.075 115.498 -5.360 1.00 69.05 C
ATOM 14 N9 G A 234 94.375 114.422 -4.415 1.00 69.01 N
ATOM 15 C8 G A 234 94.979 113.216 -4.691 1.00 69.43 C
ATOM 16 N7 G A 234 95.222 112.507 -3.622 1.00 69.78 N
ATOM 17 C5 G A 234 94.732 113.281 -2.578 1.00 69.67 C
ATOM 18 C6 G A 234 94.750 113.051 -1.178 1.00 69.43 C
ATOM 19 O6 G A 234 95.249 112.109 -0.556 1.00 69.49 O
ATOM 20 N1 G A 234 94.122 114.078 -0.486 1.00 69.93 N
ATOM 21 C2 G A 234 93.561 115.193 -1.058 1.00 70.35 C
ATOM 22 N2 G A 234 92.986 116.062 -0.212 1.00 71.66 N
ATOM 23 N3 G A 234 93.562 115.435 -2.357 1.00 70.00 N
ATOM 24 C4 G A 234 94.165 114.445 -3.054 1.00 69.50 C
ATOM 25 P A A 235 94.849 118.799 -8.464 1.00 69.91 P
ATOM 26 OP1 A A 235 94.445 118.264 -9.796 1.00 70.86 O
ATOM 27 OP2 A A 235 96.288 119.055 -8.182 1.00 69.36 O
ATOM 28 O5' A A 235 94.071 120.166 -8.232 1.00 68.36 O
TER
ATOM 1 O3' G B 252 91.840 119.426 3.850 1.00 56.97 O
ATOM 2 P U B 253 90.574 119.289 4.828 1.00 55.81 P
ATOM 3 OP1 U B 253 90.971 119.912 6.122 1.00 56.02 O
ATOM 4 OP2 U B 253 90.143 117.869 4.814 1.00 54.99 O
ATOM 5 O5' U B 253 89.455 120.203 4.153 1.00 54.14 O
ATOM 6 C5' U B 253 89.319 121.594 4.513 1.00 54.43 C
ATOM 7 C4' U B 253 88.841 122.409 3.330 1.00 56.43 C
ATOM 8 O4' U B 253 89.924 122.610 2.374 1.00 58.77 O
ATOM 9 C3' U B 253 87.709 121.804 2.515 1.00 57.00 C
ATOM 10 O3' U B 253 86.427 121.983 3.125 1.00 55.23 O
ATOM 11 C2' U B 253 87.885 122.482 1.155 1.00 57.68 C
ATOM 12 O2' U B 253 87.361 123.797 1.088 1.00 55.91 O
ATOM 13 C1' U B 253 89.419 122.524 1.039 1.00 58.74 C
ATOM 14 N1 U B 253 90.048 121.351 0.382 1.00 59.60 N
ATOM 15 C2 U B 253 89.939 121.221 -1.008 1.00 58.60 C
ATOM 16 O2 U B 253 89.370 122.035 -1.714 1.00 58.80 O
ATOM 17 N3 U B 253 90.534 120.104 -1.538 1.00 58.54 N
ATOM 18 C4 U B 253 91.224 119.122 -0.864 1.00 59.33 C
ATOM 19 O4 U B 253 91.628 118.135 -1.484 1.00 60.93 O
ATOM 20 C5 U B 253 91.317 119.322 0.551 1.00 58.59 C
ATOM 21 C6 U B 253 90.737 120.396 1.116 1.00 58.73 C
ATOM 22 P G B 254 85.370 120.757 3.137 1.00 54.74 P
ATOM 23 OP1 G B 254 84.054 121.288 3.585 1.00 52.03 O
ATOM 24 OP2 G B 254 85.960 119.569 3.812 1.00 52.18 O
ATOM 25 O5' G B 254 85.240 120.356 1.602 1.00 55.21 O
TER
ATOM 2 P G A 234 94.636 112.259 -8.987 1.00 71.55 P
ATOM 3 OP1 G A 234 95.009 112.560 -10.401 1.00 72.86 O
ATOM 4 OP2 G A 234 95.488 111.330 -8.183 1.00 71.05 O
ATOM 5 O5' G A 234 94.442 113.649 -8.235 1.00 70.70 O
ATOM 6 C5' G A 234 93.251 114.425 -8.475 1.00 69.67 C
ATOM 7 C4' G A 234 93.193 115.595 -7.533 1.00 69.31 C
ATOM 8 O4' G A 234 92.986 115.106 -6.173 1.00 68.94 O
ATOM 9 C3' G A 234 94.489 116.395 -7.509 1.00 68.46 C
ATOM 10 O3' G A 234 94.253 117.791 -7.361 1.00 68.30 O
ATOM 11 C2' G A 234 95.228 115.796 -6.321 1.00 68.43 C
ATOM 12 O2' G A 234 96.185 116.682 -5.779 1.00 68.43 O
ATOM 13 C1' G A 234 94.075 115.498 -5.360 1.00 69.05 C
ATOM 14 N9 G A 234 94.375 114.422 -4.415 1.00 69.01 N
ATOM 15 C8 G A 234 94.979 113.216 -4.691 1.00 69.43 C
ATOM 16 N7 G A 234 95.222 112.507 -3.622 1.00 69.78 N
ATOM 17 C5 G A 234 94.732 113.281 -2.578 1.00 69.67 C
ATOM 18 C6 G A 234 94.750 113.051 -1.178 1.00 69.43 C
ATOM 19 O6 G A 234 95.249 112.109 -0.556 1.00 69.49 O
ATOM 20 N1 G A 234 94.122 114.078 -0.486 1.00 69.93 N
ATOM 21 C2 G A 234 93.561 115.193 -1.058 1.00 70.35 C
ATOM 22 N2 G A 234 92.986 116.062 -0.212 1.00 71.66 N
ATOM 23 N3 G A 234 93.562 115.435 -2.357 1.00 70.00 N
ATOM 24 C4 G A 234 94.165 114.445 -3.054 1.00 69.50 C
ATOM 25 P A A 235 94.849 118.799 -8.464 1.00 69.91 P
ATOM 26 OP1 A A 235 94.445 118.264 -9.796 1.00 70.86 O
ATOM 27 OP2 A A 235 96.288 119.055 -8.182 1.00 69.36 O
ATOM 28 O5' A A 235 94.071 120.166 -8.232 1.00 68.36 O
TER
ATOM 1 O3' G B 252 91.840 119.426 3.850 1.00 56.97 O
ATOM 2 P U B 253 90.574 119.289 4.828 1.00 55.81 P
ATOM 3 OP1 U B 253 90.971 119.912 6.122 1.00 56.02 O
ATOM 4 OP2 U B 253 90.143 117.869 4.814 1.00 54.99 O
ATOM 5 O5' U B 253 89.455 120.203 4.153 1.00 54.14 O
ATOM 6 C5' U B 253 89.319 121.594 4.513 1.00 54.43 C
ATOM 7 C4' U B 253 88.841 122.409 3.330 1.00 56.43 C
ATOM 8 O4' U B 253 89.924 122.610 2.374 1.00 58.77 O
ATOM 9 C3' U B 253 87.709 121.804 2.515 1.00 57.00 C
ATOM 10 O3' U B 253 86.427 121.983 3.125 1.00 55.23 O
ATOM 11 C2' U B 253 87.885 122.482 1.155 1.00 57.68 C
ATOM 12 O2' U B 253 87.361 123.797 1.088 1.00 55.91 O
ATOM 13 C1' U B 253 89.419 122.524 1.039 1.00 58.74 C
ATOM 14 N1 U B 253 90.048 121.351 0.382 1.00 59.60 N
ATOM 15 C2 U B 253 89.939 121.221 -1.008 1.00 58.60 C
ATOM 16 O2 U B 253 89.370 122.035 -1.714 1.00 58.80 O
ATOM 17 N3 U B 253 90.534 120.104 -1.538 1.00 58.54 N
ATOM 18 C4 U B 253 91.224 119.122 -0.864 1.00 59.33 C
ATOM 19 O4 U B 253 91.628 118.135 -1.484 1.00 60.93 O
ATOM 20 C5 U B 253 91.317 119.322 0.551 1.00 58.59 C
ATOM 21 C6 U B 253 90.737 120.396 1.116 1.00 58.73 C
ATOM 22 P G B 254 85.370 120.757 3.137 1.00 54.74 P
ATOM 23 OP1 G B 254 84.054 121.288 3.585 1.00 52.03 O
ATOM 24 OP2 G B 254 85.960 119.569 3.812 1.00 52.18 O
ATOM 25 O5' G B 254 85.240 120.356 1.602 1.00 55.21 O
TER
Atoms:
OP1: (95.009,112.560,-10.401)
OP2: (95.488,111.330,-8.183)
C3': (94.489,116.395,-7.509)
C1': (94.075,115.498,-5.360)
C5': (93.251,114.425,-8.475)
O6: (95.249,112.109,-0.556)
O4': (92.986,115.106,-6.173)
C8: (94.979,113.216,-4.691)
C2: (93.561,115.193,-1.058)
C6: (94.750,113.051,-1.178)
C5: (94.732,113.281,-2.578)
C4: (94.165,114.445,-3.054)
P: (94.636,112.259,-8.987)
C4': (93.193,115.595,-7.533)
C2': (95.228,115.796,-6.321)
O2': (96.185,116.682,-5.779)
N1: (94.122,114.078,-0.486)
N2: (92.986,116.062,-0.212)
N3: (93.562,115.435,-2.357)
N7: (95.222,112.507,-3.622)
N9: (94.375,114.422,-4.415)
O5': (94.442,113.649,-8.235)
O3': (94.253,117.791,-7.361)
OP2: (95.488,111.330,-8.183)
C3': (94.489,116.395,-7.509)
C1': (94.075,115.498,-5.360)
C5': (93.251,114.425,-8.475)
O6: (95.249,112.109,-0.556)
O4': (92.986,115.106,-6.173)
C8: (94.979,113.216,-4.691)
C2: (93.561,115.193,-1.058)
C6: (94.750,113.051,-1.178)
C5: (94.732,113.281,-2.578)
C4: (94.165,114.445,-3.054)
P: (94.636,112.259,-8.987)
C4': (93.193,115.595,-7.533)
C2': (95.228,115.796,-6.321)
O2': (96.185,116.682,-5.779)
N1: (94.122,114.078,-0.486)
N2: (92.986,116.062,-0.212)
N3: (93.562,115.435,-2.357)
N7: (95.222,112.507,-3.622)
N9: (94.375,114.422,-4.415)
O5': (94.442,113.649,-8.235)
O3': (94.253,117.791,-7.361)
C4: (91.224,119.122,-0.864)
N3: (90.534,120.104,-1.538)
OP1: (90.971,119.912,6.122)
OP2: (90.143,117.869,4.814)
C2: (89.939,121.221,-1.008)
C1': (89.419,122.524,1.039)
C3': (87.709,121.804,2.515)
O5': (89.455,120.203,4.153)
O4': (89.924,122.610,2.374)
C5': (89.319,121.594,4.513)
P: (90.574,119.289,4.828)
C4': (88.841,122.409,3.330)
C2': (87.885,122.482,1.155)
O2': (87.361,123.797,1.088)
N1: (90.048,121.351,0.382)
O4: (91.628,118.135,-1.484)
O2: (89.370,122.035,-1.714)
C6: (90.737,120.396,1.116)
C5: (91.317,119.322,0.551)
O3': (86.427,121.983,3.125)
N3: (90.534,120.104,-1.538)
OP1: (90.971,119.912,6.122)
OP2: (90.143,117.869,4.814)
C2: (89.939,121.221,-1.008)
C1': (89.419,122.524,1.039)
C3': (87.709,121.804,2.515)
O5': (89.455,120.203,4.153)
O4': (89.924,122.610,2.374)
C5': (89.319,121.594,4.513)
P: (90.574,119.289,4.828)
C4': (88.841,122.409,3.330)
C2': (87.885,122.482,1.155)
O2': (87.361,123.797,1.088)
N1: (90.048,121.351,0.382)
O4: (91.628,118.135,-1.484)
O2: (89.370,122.035,-1.714)
C6: (90.737,120.396,1.116)
C5: (91.317,119.322,0.551)
O3': (86.427,121.983,3.125)
Image (generated by PyMOL):