Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0234:0253
Extra
PDB:
ATOM 1 O3' C A 233 92.464 112.252 -9.600 1.00 66.27 O
ATOM 2 P G A 234 93.964 112.822 -9.640 1.00 68.64 P
ATOM 3 OP1 G A 234 94.308 113.160 -11.055 1.00 69.45 O
ATOM 4 OP2 G A 234 94.832 111.882 -8.878 1.00 65.08 O
ATOM 5 O5' G A 234 93.828 114.177 -8.821 1.00 65.53 O
ATOM 6 C5' G A 234 92.656 114.997 -8.979 1.00 66.36 C
ATOM 7 C4' G A 234 92.688 116.138 -8.001 1.00 67.73 C
ATOM 8 O4' G A 234 92.480 115.628 -6.650 1.00 67.53 O
ATOM 9 C3' G A 234 94.012 116.894 -7.978 1.00 67.39 C
ATOM 10 O3' G A 234 93.787 118.281 -7.802 1.00 67.05 O
ATOM 11 C2' G A 234 94.729 116.282 -6.782 1.00 66.82 C
ATOM 12 O2' G A 234 95.701 117.130 -6.203 1.00 65.22 O
ATOM 13 C1' G A 234 93.562 116.015 -5.832 1.00 66.60 C
ATOM 14 N9 G A 234 93.845 114.943 -4.882 1.00 65.84 N
ATOM 15 C8 G A 234 94.436 113.732 -5.149 1.00 65.57 C
ATOM 16 N7 G A 234 94.665 113.027 -4.077 1.00 65.88 N
ATOM 17 C5 G A 234 94.174 113.808 -3.039 1.00 65.46 C
ATOM 18 C6 G A 234 94.168 113.577 -1.641 1.00 64.98 C
ATOM 19 O6 G A 234 94.629 112.615 -1.016 1.00 64.10 O
ATOM 20 N1 G A 234 93.556 114.621 -0.955 1.00 65.42 N
ATOM 21 C2 G A 234 93.026 115.747 -1.533 1.00 64.72 C
ATOM 22 N2 G A 234 92.461 116.632 -0.696 1.00 63.00 N
ATOM 23 N3 G A 234 93.044 115.984 -2.835 1.00 65.19 N
ATOM 24 C4 G A 234 93.632 114.978 -3.523 1.00 65.62 C
ATOM 25 P A A 235 94.329 119.306 -8.910 1.00 65.98 P
ATOM 26 OP1 A A 235 93.928 118.781 -10.245 1.00 66.98 O
ATOM 27 OP2 A A 235 95.765 119.566 -8.621 1.00 63.52 O
ATOM 28 O5' A A 235 93.505 120.633 -8.632 1.00 64.68 O
TER
ATOM 1 O3' G B 252 91.276 119.976 3.484 1.00 53.66 O
ATOM 2 P U B 253 89.947 119.713 4.338 1.00 52.16 P
ATOM 3 OP1 U B 253 90.208 120.153 5.729 1.00 53.60 O
ATOM 4 OP2 U B 253 89.531 118.318 4.080 1.00 53.79 O
ATOM 5 O5' U B 253 88.869 120.683 3.684 1.00 52.72 O
ATOM 6 C5' U B 253 88.790 122.072 4.056 1.00 52.31 C
ATOM 7 C4' U B 253 88.318 122.890 2.880 1.00 53.70 C
ATOM 8 O4' U B 253 89.408 123.092 1.941 1.00 53.14 O
ATOM 9 C3' U B 253 87.228 122.221 2.063 1.00 53.29 C
ATOM 10 O3' U B 253 85.943 122.402 2.642 1.00 52.95 O
ATOM 11 C2' U B 253 87.391 122.877 0.699 1.00 52.06 C
ATOM 12 O2' U B 253 86.798 124.157 0.636 1.00 51.88 O
ATOM 13 C1' U B 253 88.916 123.001 0.612 1.00 51.73 C
ATOM 14 N1 U B 253 89.577 121.855 -0.036 1.00 52.40 N
ATOM 15 C2 U B 253 89.400 121.682 -1.402 1.00 52.90 C
ATOM 16 O2 U B 253 88.724 122.436 -2.089 1.00 55.16 O
ATOM 17 N3 U B 253 90.045 120.595 -1.935 1.00 51.43 N
ATOM 18 C4 U B 253 90.833 119.688 -1.265 1.00 52.82 C
ATOM 19 O4 U B 253 91.350 118.760 -1.889 1.00 53.84 O
ATOM 20 C5 U B 253 90.968 119.932 0.139 1.00 52.10 C
ATOM 21 C6 U B 253 90.352 120.977 0.691 1.00 50.84 C
ATOM 22 P G B 254 84.892 121.193 2.624 1.00 54.74 P
ATOM 23 OP1 G B 254 83.579 121.759 3.040 1.00 52.56 O
ATOM 24 OP2 G B 254 85.472 120.046 3.364 1.00 53.71 O
ATOM 25 O5' G B 254 84.797 120.787 1.085 1.00 56.25 O
TER
ATOM 2 P G A 234 93.964 112.822 -9.640 1.00 68.64 P
ATOM 3 OP1 G A 234 94.308 113.160 -11.055 1.00 69.45 O
ATOM 4 OP2 G A 234 94.832 111.882 -8.878 1.00 65.08 O
ATOM 5 O5' G A 234 93.828 114.177 -8.821 1.00 65.53 O
ATOM 6 C5' G A 234 92.656 114.997 -8.979 1.00 66.36 C
ATOM 7 C4' G A 234 92.688 116.138 -8.001 1.00 67.73 C
ATOM 8 O4' G A 234 92.480 115.628 -6.650 1.00 67.53 O
ATOM 9 C3' G A 234 94.012 116.894 -7.978 1.00 67.39 C
ATOM 10 O3' G A 234 93.787 118.281 -7.802 1.00 67.05 O
ATOM 11 C2' G A 234 94.729 116.282 -6.782 1.00 66.82 C
ATOM 12 O2' G A 234 95.701 117.130 -6.203 1.00 65.22 O
ATOM 13 C1' G A 234 93.562 116.015 -5.832 1.00 66.60 C
ATOM 14 N9 G A 234 93.845 114.943 -4.882 1.00 65.84 N
ATOM 15 C8 G A 234 94.436 113.732 -5.149 1.00 65.57 C
ATOM 16 N7 G A 234 94.665 113.027 -4.077 1.00 65.88 N
ATOM 17 C5 G A 234 94.174 113.808 -3.039 1.00 65.46 C
ATOM 18 C6 G A 234 94.168 113.577 -1.641 1.00 64.98 C
ATOM 19 O6 G A 234 94.629 112.615 -1.016 1.00 64.10 O
ATOM 20 N1 G A 234 93.556 114.621 -0.955 1.00 65.42 N
ATOM 21 C2 G A 234 93.026 115.747 -1.533 1.00 64.72 C
ATOM 22 N2 G A 234 92.461 116.632 -0.696 1.00 63.00 N
ATOM 23 N3 G A 234 93.044 115.984 -2.835 1.00 65.19 N
ATOM 24 C4 G A 234 93.632 114.978 -3.523 1.00 65.62 C
ATOM 25 P A A 235 94.329 119.306 -8.910 1.00 65.98 P
ATOM 26 OP1 A A 235 93.928 118.781 -10.245 1.00 66.98 O
ATOM 27 OP2 A A 235 95.765 119.566 -8.621 1.00 63.52 O
ATOM 28 O5' A A 235 93.505 120.633 -8.632 1.00 64.68 O
TER
ATOM 1 O3' G B 252 91.276 119.976 3.484 1.00 53.66 O
ATOM 2 P U B 253 89.947 119.713 4.338 1.00 52.16 P
ATOM 3 OP1 U B 253 90.208 120.153 5.729 1.00 53.60 O
ATOM 4 OP2 U B 253 89.531 118.318 4.080 1.00 53.79 O
ATOM 5 O5' U B 253 88.869 120.683 3.684 1.00 52.72 O
ATOM 6 C5' U B 253 88.790 122.072 4.056 1.00 52.31 C
ATOM 7 C4' U B 253 88.318 122.890 2.880 1.00 53.70 C
ATOM 8 O4' U B 253 89.408 123.092 1.941 1.00 53.14 O
ATOM 9 C3' U B 253 87.228 122.221 2.063 1.00 53.29 C
ATOM 10 O3' U B 253 85.943 122.402 2.642 1.00 52.95 O
ATOM 11 C2' U B 253 87.391 122.877 0.699 1.00 52.06 C
ATOM 12 O2' U B 253 86.798 124.157 0.636 1.00 51.88 O
ATOM 13 C1' U B 253 88.916 123.001 0.612 1.00 51.73 C
ATOM 14 N1 U B 253 89.577 121.855 -0.036 1.00 52.40 N
ATOM 15 C2 U B 253 89.400 121.682 -1.402 1.00 52.90 C
ATOM 16 O2 U B 253 88.724 122.436 -2.089 1.00 55.16 O
ATOM 17 N3 U B 253 90.045 120.595 -1.935 1.00 51.43 N
ATOM 18 C4 U B 253 90.833 119.688 -1.265 1.00 52.82 C
ATOM 19 O4 U B 253 91.350 118.760 -1.889 1.00 53.84 O
ATOM 20 C5 U B 253 90.968 119.932 0.139 1.00 52.10 C
ATOM 21 C6 U B 253 90.352 120.977 0.691 1.00 50.84 C
ATOM 22 P G B 254 84.892 121.193 2.624 1.00 54.74 P
ATOM 23 OP1 G B 254 83.579 121.759 3.040 1.00 52.56 O
ATOM 24 OP2 G B 254 85.472 120.046 3.364 1.00 53.71 O
ATOM 25 O5' G B 254 84.797 120.787 1.085 1.00 56.25 O
TER
Atoms:
OP1: (94.308,113.160,-11.055)
OP2: (94.832,111.882,-8.878)
C3': (94.012,116.894,-7.978)
C1': (93.562,116.015,-5.832)
C5': (92.656,114.997,-8.979)
O6: (94.629,112.615,-1.016)
O4': (92.480,115.628,-6.650)
C8: (94.436,113.732,-5.149)
C2: (93.026,115.747,-1.533)
C6: (94.168,113.577,-1.641)
C5: (94.174,113.808,-3.039)
C4: (93.632,114.978,-3.523)
P: (93.964,112.822,-9.640)
C4': (92.688,116.138,-8.001)
C2': (94.729,116.282,-6.782)
O2': (95.701,117.130,-6.203)
N1: (93.556,114.621,-0.955)
N2: (92.461,116.632,-0.696)
N3: (93.044,115.984,-2.835)
N7: (94.665,113.027,-4.077)
N9: (93.845,114.943,-4.882)
O5': (93.828,114.177,-8.821)
O3': (93.787,118.281,-7.802)
OP2: (94.832,111.882,-8.878)
C3': (94.012,116.894,-7.978)
C1': (93.562,116.015,-5.832)
C5': (92.656,114.997,-8.979)
O6: (94.629,112.615,-1.016)
O4': (92.480,115.628,-6.650)
C8: (94.436,113.732,-5.149)
C2: (93.026,115.747,-1.533)
C6: (94.168,113.577,-1.641)
C5: (94.174,113.808,-3.039)
C4: (93.632,114.978,-3.523)
P: (93.964,112.822,-9.640)
C4': (92.688,116.138,-8.001)
C2': (94.729,116.282,-6.782)
O2': (95.701,117.130,-6.203)
N1: (93.556,114.621,-0.955)
N2: (92.461,116.632,-0.696)
N3: (93.044,115.984,-2.835)
N7: (94.665,113.027,-4.077)
N9: (93.845,114.943,-4.882)
O5': (93.828,114.177,-8.821)
O3': (93.787,118.281,-7.802)
C4: (90.833,119.688,-1.265)
N3: (90.045,120.595,-1.935)
OP1: (90.208,120.153,5.729)
OP2: (89.531,118.318,4.080)
C2: (89.400,121.682,-1.402)
C1': (88.916,123.001,0.612)
C3': (87.228,122.221,2.063)
O5': (88.869,120.683,3.684)
O4': (89.408,123.092,1.941)
C5': (88.790,122.072,4.056)
P: (89.947,119.713,4.338)
C4': (88.318,122.890,2.880)
C2': (87.391,122.877,0.699)
O2': (86.798,124.157,0.636)
N1: (89.577,121.855,-0.036)
O4: (91.350,118.760,-1.889)
O2: (88.724,122.436,-2.089)
C6: (90.352,120.977,0.691)
C5: (90.968,119.932,0.139)
O3': (85.943,122.402,2.642)
N3: (90.045,120.595,-1.935)
OP1: (90.208,120.153,5.729)
OP2: (89.531,118.318,4.080)
C2: (89.400,121.682,-1.402)
C1': (88.916,123.001,0.612)
C3': (87.228,122.221,2.063)
O5': (88.869,120.683,3.684)
O4': (89.408,123.092,1.941)
C5': (88.790,122.072,4.056)
P: (89.947,119.713,4.338)
C4': (88.318,122.890,2.880)
C2': (87.391,122.877,0.699)
O2': (86.798,124.157,0.636)
N1: (89.577,121.855,-0.036)
O4: (91.350,118.760,-1.889)
O2: (88.724,122.436,-2.089)
C6: (90.352,120.977,0.691)
C5: (90.968,119.932,0.139)
O3': (85.943,122.402,2.642)
Image (generated by PyMOL):