Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:912:99
Extra
PDB:
ATOM 1 O3' C A 11 52.864 37.344 111.547 1.00 52.71 O
ATOM 2 P A A 12 54.333 36.847 111.945 1.00 53.56 P
ATOM 3 OP1 A A 12 54.190 35.834 113.015 1.00 55.25 O
ATOM 4 OP2 A A 12 55.185 38.039 112.189 1.00 54.80 O
ATOM 5 O5' A A 12 54.837 36.123 110.622 1.00 52.70 O
ATOM 6 C5' A A 12 54.753 34.702 110.484 1.00 50.91 C
ATOM 7 C4' A A 12 55.475 34.260 109.237 1.00 50.64 C
ATOM 8 O4' A A 12 54.696 34.643 108.069 1.00 49.75 O
ATOM 9 C3' A A 12 56.870 34.847 109.031 1.00 49.41 C
ATOM 10 O3' A A 12 57.686 33.876 108.383 1.00 48.84 O
ATOM 11 C2' A A 12 56.587 35.995 108.065 1.00 50.46 C
ATOM 12 O2' A A 12 57.676 36.394 107.261 1.00 50.60 O
ATOM 13 C1' A A 12 55.521 35.362 107.182 1.00 50.79 C
ATOM 14 N9 A A 12 54.718 36.331 106.439 1.00 50.56 N
ATOM 15 C8 A A 12 53.619 37.045 106.845 1.00 49.22 C
ATOM 16 N7 A A 12 53.147 37.852 105.927 1.00 48.25 N
ATOM 17 C5 A A 12 53.989 37.653 104.844 1.00 48.83 C
ATOM 18 C6 A A 12 54.021 38.213 103.560 1.00 48.86 C
ATOM 19 N6 A A 12 53.158 39.136 103.141 1.00 49.57 N
ATOM 20 N1 A A 12 54.984 37.790 102.712 1.00 49.79 N
ATOM 21 C2 A A 12 55.858 36.870 103.143 1.00 50.77 C
ATOM 22 N3 A A 12 55.935 36.273 104.331 1.00 50.42 N
ATOM 23 C4 A A 12 54.958 36.714 105.143 1.00 49.83 C
ATOM 24 P G A 13 59.025 33.343 109.095 1.00 49.30 P
ATOM 25 OP1 G A 13 59.462 32.162 108.317 1.00 48.60 O
ATOM 26 OP2 G A 13 58.778 33.213 110.552 1.00 48.78 O
ATOM 27 O5' G A 13 60.109 34.495 108.863 1.00 51.18 O
TER
ATOM 1 O3' C B 8 51.692 42.338 98.687 1.00 44.45 O
ATOM 2 P C B 9 52.996 43.282 98.570 1.00 46.32 P
ATOM 3 OP1 C B 9 52.582 44.627 99.052 1.00 45.36 O
ATOM 4 OP2 C B 9 53.554 43.129 97.205 1.00 47.15 O
ATOM 5 O5' C B 9 54.080 42.692 99.582 1.00 42.80 O
ATOM 6 C5' C B 9 53.814 42.605 100.986 1.00 41.34 C
ATOM 7 C4' C B 9 54.765 41.627 101.654 1.00 42.12 C
ATOM 8 O4' C B 9 54.805 40.386 100.886 1.00 42.15 O
ATOM 9 C3' C B 9 56.220 42.056 101.836 1.00 40.68 C
ATOM 10 O3' C B 9 56.702 41.500 103.049 1.00 43.44 O
ATOM 11 C2' C B 9 56.925 41.356 100.684 1.00 40.82 C
ATOM 12 O2' C B 9 58.281 41.075 100.953 1.00 40.78 O
ATOM 13 C1' C B 9 56.148 40.048 100.612 1.00 41.58 C
ATOM 14 N1 C B 9 56.220 39.401 99.295 1.00 42.37 N
ATOM 15 C2 C B 9 56.955 38.210 99.162 1.00 42.54 C
ATOM 16 O2 C B 9 57.520 37.724 100.163 1.00 40.91 O
ATOM 17 N3 C B 9 57.035 37.622 97.948 1.00 41.51 N
ATOM 18 C4 C B 9 56.427 38.175 96.897 1.00 40.63 C
ATOM 19 N4 C B 9 56.546 37.570 95.714 1.00 41.38 N
ATOM 20 C5 C B 9 55.671 39.375 97.008 1.00 42.31 C
ATOM 21 C6 C B 9 55.593 39.948 98.212 1.00 41.97 C
ATOM 22 P A B 10 56.918 42.441 104.333 1.00 45.91 P
ATOM 23 OP1 A B 10 55.675 43.218 104.572 1.00 43.44 O
ATOM 24 OP2 A B 10 58.209 43.147 104.147 1.00 46.39 O
ATOM 25 O5' A B 10 57.110 41.415 105.534 1.00 46.88 O
TER
ATOM 2 P A A 12 54.333 36.847 111.945 1.00 53.56 P
ATOM 3 OP1 A A 12 54.190 35.834 113.015 1.00 55.25 O
ATOM 4 OP2 A A 12 55.185 38.039 112.189 1.00 54.80 O
ATOM 5 O5' A A 12 54.837 36.123 110.622 1.00 52.70 O
ATOM 6 C5' A A 12 54.753 34.702 110.484 1.00 50.91 C
ATOM 7 C4' A A 12 55.475 34.260 109.237 1.00 50.64 C
ATOM 8 O4' A A 12 54.696 34.643 108.069 1.00 49.75 O
ATOM 9 C3' A A 12 56.870 34.847 109.031 1.00 49.41 C
ATOM 10 O3' A A 12 57.686 33.876 108.383 1.00 48.84 O
ATOM 11 C2' A A 12 56.587 35.995 108.065 1.00 50.46 C
ATOM 12 O2' A A 12 57.676 36.394 107.261 1.00 50.60 O
ATOM 13 C1' A A 12 55.521 35.362 107.182 1.00 50.79 C
ATOM 14 N9 A A 12 54.718 36.331 106.439 1.00 50.56 N
ATOM 15 C8 A A 12 53.619 37.045 106.845 1.00 49.22 C
ATOM 16 N7 A A 12 53.147 37.852 105.927 1.00 48.25 N
ATOM 17 C5 A A 12 53.989 37.653 104.844 1.00 48.83 C
ATOM 18 C6 A A 12 54.021 38.213 103.560 1.00 48.86 C
ATOM 19 N6 A A 12 53.158 39.136 103.141 1.00 49.57 N
ATOM 20 N1 A A 12 54.984 37.790 102.712 1.00 49.79 N
ATOM 21 C2 A A 12 55.858 36.870 103.143 1.00 50.77 C
ATOM 22 N3 A A 12 55.935 36.273 104.331 1.00 50.42 N
ATOM 23 C4 A A 12 54.958 36.714 105.143 1.00 49.83 C
ATOM 24 P G A 13 59.025 33.343 109.095 1.00 49.30 P
ATOM 25 OP1 G A 13 59.462 32.162 108.317 1.00 48.60 O
ATOM 26 OP2 G A 13 58.778 33.213 110.552 1.00 48.78 O
ATOM 27 O5' G A 13 60.109 34.495 108.863 1.00 51.18 O
TER
ATOM 1 O3' C B 8 51.692 42.338 98.687 1.00 44.45 O
ATOM 2 P C B 9 52.996 43.282 98.570 1.00 46.32 P
ATOM 3 OP1 C B 9 52.582 44.627 99.052 1.00 45.36 O
ATOM 4 OP2 C B 9 53.554 43.129 97.205 1.00 47.15 O
ATOM 5 O5' C B 9 54.080 42.692 99.582 1.00 42.80 O
ATOM 6 C5' C B 9 53.814 42.605 100.986 1.00 41.34 C
ATOM 7 C4' C B 9 54.765 41.627 101.654 1.00 42.12 C
ATOM 8 O4' C B 9 54.805 40.386 100.886 1.00 42.15 O
ATOM 9 C3' C B 9 56.220 42.056 101.836 1.00 40.68 C
ATOM 10 O3' C B 9 56.702 41.500 103.049 1.00 43.44 O
ATOM 11 C2' C B 9 56.925 41.356 100.684 1.00 40.82 C
ATOM 12 O2' C B 9 58.281 41.075 100.953 1.00 40.78 O
ATOM 13 C1' C B 9 56.148 40.048 100.612 1.00 41.58 C
ATOM 14 N1 C B 9 56.220 39.401 99.295 1.00 42.37 N
ATOM 15 C2 C B 9 56.955 38.210 99.162 1.00 42.54 C
ATOM 16 O2 C B 9 57.520 37.724 100.163 1.00 40.91 O
ATOM 17 N3 C B 9 57.035 37.622 97.948 1.00 41.51 N
ATOM 18 C4 C B 9 56.427 38.175 96.897 1.00 40.63 C
ATOM 19 N4 C B 9 56.546 37.570 95.714 1.00 41.38 N
ATOM 20 C5 C B 9 55.671 39.375 97.008 1.00 42.31 C
ATOM 21 C6 C B 9 55.593 39.948 98.212 1.00 41.97 C
ATOM 22 P A B 10 56.918 42.441 104.333 1.00 45.91 P
ATOM 23 OP1 A B 10 55.675 43.218 104.572 1.00 43.44 O
ATOM 24 OP2 A B 10 58.209 43.147 104.147 1.00 46.39 O
ATOM 25 O5' A B 10 57.110 41.415 105.534 1.00 46.88 O
TER
Atoms:
OP1: (54.190,35.834,113.015)
OP2: (55.185,38.039,112.189)
C3': (56.870,34.847,109.031)
C1': (55.521,35.362,107.182)
C5': (54.753,34.702,110.484)
O4': (54.696,34.643,108.069)
C8: (53.619,37.045,106.845)
O2': (57.676,36.394,107.261)
C6: (54.021,38.213,103.560)
C5: (53.989,37.653,104.844)
C4: (54.958,36.714,105.143)
P: (54.333,36.847,111.945)
C4': (55.475,34.260,109.237)
C2': (56.587,35.995,108.065)
C2: (55.858,36.870,103.143)
N1: (54.984,37.790,102.712)
N3: (55.935,36.273,104.331)
N6: (53.158,39.136,103.141)
N7: (53.147,37.852,105.927)
N9: (54.718,36.331,106.439)
O5': (54.837,36.123,110.622)
O3': (57.686,33.876,108.383)
OP2: (55.185,38.039,112.189)
C3': (56.870,34.847,109.031)
C1': (55.521,35.362,107.182)
C5': (54.753,34.702,110.484)
O4': (54.696,34.643,108.069)
C8: (53.619,37.045,106.845)
O2': (57.676,36.394,107.261)
C6: (54.021,38.213,103.560)
C5: (53.989,37.653,104.844)
C4: (54.958,36.714,105.143)
P: (54.333,36.847,111.945)
C4': (55.475,34.260,109.237)
C2': (56.587,35.995,108.065)
C2: (55.858,36.870,103.143)
N1: (54.984,37.790,102.712)
N3: (55.935,36.273,104.331)
N6: (53.158,39.136,103.141)
N7: (53.147,37.852,105.927)
N9: (54.718,36.331,106.439)
O5': (54.837,36.123,110.622)
O3': (57.686,33.876,108.383)
C2: (56.955,38.210,99.162)
OP1: (52.582,44.627,99.052)
OP2: (53.554,43.129,97.205)
C4: (56.427,38.175,96.897)
O5': (54.080,42.692,99.582)
C3': (56.220,42.056,101.836)
C1': (56.148,40.048,100.612)
O4': (54.805,40.386,100.886)
C5': (53.814,42.605,100.986)
P: (52.996,43.282,98.570)
O2: (57.520,37.724,100.163)
C4': (54.765,41.627,101.654)
C2': (56.925,41.356,100.684)
O2': (58.281,41.075,100.953)
N1: (56.220,39.401,99.295)
N3: (57.035,37.622,97.948)
N4: (56.546,37.570,95.714)
C6: (55.593,39.948,98.212)
C5: (55.671,39.375,97.008)
O3': (56.702,41.500,103.049)
OP1: (52.582,44.627,99.052)
OP2: (53.554,43.129,97.205)
C4: (56.427,38.175,96.897)
O5': (54.080,42.692,99.582)
C3': (56.220,42.056,101.836)
C1': (56.148,40.048,100.612)
O4': (54.805,40.386,100.886)
C5': (53.814,42.605,100.986)
P: (52.996,43.282,98.570)
O2: (57.520,37.724,100.163)
C4': (54.765,41.627,101.654)
C2': (56.925,41.356,100.684)
O2': (58.281,41.075,100.953)
N1: (56.220,39.401,99.295)
N3: (57.035,37.622,97.948)
N4: (56.546,37.570,95.714)
C6: (55.593,39.948,98.212)
C5: (55.671,39.375,97.008)
O3': (56.702,41.500,103.049)
Image (generated by PyMOL):