Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:0234:0253
Extra
PDB:
ATOM 1 O3' C A 233 92.211 111.207 -9.843 1.00 61.39 O
ATOM 2 P G A 234 93.682 111.845 -9.912 1.00 62.08 P
ATOM 3 OP1 G A 234 93.957 112.241 -11.324 1.00 64.31 O
ATOM 4 OP2 G A 234 94.614 110.911 -9.220 1.00 58.88 O
ATOM 5 O5' G A 234 93.520 113.171 -9.048 1.00 60.53 O
ATOM 6 C5' G A 234 92.363 114.011 -9.216 1.00 61.04 C
ATOM 7 C4' G A 234 92.438 115.194 -8.284 1.00 61.75 C
ATOM 8 O4' G A 234 92.236 114.744 -6.915 1.00 61.95 O
ATOM 9 C3' G A 234 93.768 115.933 -8.302 1.00 61.71 C
ATOM 10 O3' G A 234 93.557 117.326 -8.170 1.00 63.41 O
ATOM 11 C2' G A 234 94.495 115.359 -7.094 1.00 61.31 C
ATOM 12 O2' G A 234 95.456 116.234 -6.537 1.00 61.96 O
ATOM 13 C1' G A 234 93.343 115.117 -6.123 1.00 61.10 C
ATOM 14 N9 G A 234 93.631 114.031 -5.191 1.00 59.70 N
ATOM 15 C8 G A 234 94.248 112.840 -5.480 1.00 59.69 C
ATOM 16 N7 G A 234 94.435 112.091 -4.430 1.00 60.55 N
ATOM 17 C5 G A 234 93.896 112.825 -3.384 1.00 59.89 C
ATOM 18 C6 G A 234 93.825 112.530 -2.000 1.00 59.58 C
ATOM 19 O6 G A 234 94.257 111.540 -1.402 1.00 60.48 O
ATOM 20 N1 G A 234 93.182 113.539 -1.297 1.00 58.83 N
ATOM 21 C2 G A 234 92.681 114.689 -1.848 1.00 59.43 C
ATOM 22 N2 G A 234 92.085 115.536 -0.996 1.00 60.29 N
ATOM 23 N3 G A 234 92.755 114.986 -3.135 1.00 59.32 N
ATOM 24 C4 G A 234 93.373 114.015 -3.839 1.00 59.55 C
ATOM 25 P A A 235 94.030 118.302 -9.353 1.00 62.78 P
ATOM 26 OP1 A A 235 93.522 117.733 -10.628 1.00 64.10 O
ATOM 27 OP2 A A 235 95.492 118.521 -9.178 1.00 61.68 O
ATOM 28 O5' A A 235 93.237 119.654 -9.075 1.00 61.34 O
TER
ATOM 1 O3' G B 252 91.035 118.957 3.069 1.00 47.93 O
ATOM 2 P U B 253 89.683 118.713 3.894 1.00 49.49 P
ATOM 3 OP1 U B 253 89.913 119.192 5.286 1.00 49.36 O
ATOM 4 OP2 U B 253 89.258 117.315 3.669 1.00 49.27 O
ATOM 5 O5' U B 253 88.626 119.675 3.190 1.00 48.50 O
ATOM 6 C5' U B 253 88.474 121.050 3.604 1.00 48.79 C
ATOM 7 C4' U B 253 88.070 121.899 2.425 1.00 49.91 C
ATOM 8 O4' U B 253 89.194 122.035 1.515 1.00 50.28 O
ATOM 9 C3' U B 253 86.975 121.281 1.578 1.00 49.64 C
ATOM 10 O3' U B 253 85.690 121.560 2.109 1.00 50.01 O
ATOM 11 C2' U B 253 87.207 121.914 0.212 1.00 47.85 C
ATOM 12 O2' U B 253 86.662 123.211 0.120 1.00 46.15 O
ATOM 13 C1' U B 253 88.736 121.976 0.171 1.00 47.19 C
ATOM 14 N1 U B 253 89.373 120.818 -0.482 1.00 46.23 N
ATOM 15 C2 U B 253 89.226 120.677 -1.856 1.00 45.26 C
ATOM 16 O2 U B 253 88.606 121.470 -2.542 1.00 46.72 O
ATOM 17 N3 U B 253 89.833 119.573 -2.393 1.00 42.76 N
ATOM 18 C4 U B 253 90.559 118.617 -1.718 1.00 46.11 C
ATOM 19 O4 U B 253 91.041 117.670 -2.342 1.00 45.68 O
ATOM 20 C5 U B 253 90.679 118.839 -0.307 1.00 45.73 C
ATOM 21 C6 U B 253 90.096 119.900 0.246 1.00 44.43 C
ATOM 22 P G B 254 84.569 120.419 2.094 1.00 50.47 P
ATOM 23 OP1 G B 254 83.302 121.072 2.524 1.00 50.11 O
ATOM 24 OP2 G B 254 85.086 119.237 2.834 1.00 49.59 O
ATOM 25 O5' G B 254 84.459 119.987 0.560 1.00 53.96 O
TER
ATOM 2 P G A 234 93.682 111.845 -9.912 1.00 62.08 P
ATOM 3 OP1 G A 234 93.957 112.241 -11.324 1.00 64.31 O
ATOM 4 OP2 G A 234 94.614 110.911 -9.220 1.00 58.88 O
ATOM 5 O5' G A 234 93.520 113.171 -9.048 1.00 60.53 O
ATOM 6 C5' G A 234 92.363 114.011 -9.216 1.00 61.04 C
ATOM 7 C4' G A 234 92.438 115.194 -8.284 1.00 61.75 C
ATOM 8 O4' G A 234 92.236 114.744 -6.915 1.00 61.95 O
ATOM 9 C3' G A 234 93.768 115.933 -8.302 1.00 61.71 C
ATOM 10 O3' G A 234 93.557 117.326 -8.170 1.00 63.41 O
ATOM 11 C2' G A 234 94.495 115.359 -7.094 1.00 61.31 C
ATOM 12 O2' G A 234 95.456 116.234 -6.537 1.00 61.96 O
ATOM 13 C1' G A 234 93.343 115.117 -6.123 1.00 61.10 C
ATOM 14 N9 G A 234 93.631 114.031 -5.191 1.00 59.70 N
ATOM 15 C8 G A 234 94.248 112.840 -5.480 1.00 59.69 C
ATOM 16 N7 G A 234 94.435 112.091 -4.430 1.00 60.55 N
ATOM 17 C5 G A 234 93.896 112.825 -3.384 1.00 59.89 C
ATOM 18 C6 G A 234 93.825 112.530 -2.000 1.00 59.58 C
ATOM 19 O6 G A 234 94.257 111.540 -1.402 1.00 60.48 O
ATOM 20 N1 G A 234 93.182 113.539 -1.297 1.00 58.83 N
ATOM 21 C2 G A 234 92.681 114.689 -1.848 1.00 59.43 C
ATOM 22 N2 G A 234 92.085 115.536 -0.996 1.00 60.29 N
ATOM 23 N3 G A 234 92.755 114.986 -3.135 1.00 59.32 N
ATOM 24 C4 G A 234 93.373 114.015 -3.839 1.00 59.55 C
ATOM 25 P A A 235 94.030 118.302 -9.353 1.00 62.78 P
ATOM 26 OP1 A A 235 93.522 117.733 -10.628 1.00 64.10 O
ATOM 27 OP2 A A 235 95.492 118.521 -9.178 1.00 61.68 O
ATOM 28 O5' A A 235 93.237 119.654 -9.075 1.00 61.34 O
TER
ATOM 1 O3' G B 252 91.035 118.957 3.069 1.00 47.93 O
ATOM 2 P U B 253 89.683 118.713 3.894 1.00 49.49 P
ATOM 3 OP1 U B 253 89.913 119.192 5.286 1.00 49.36 O
ATOM 4 OP2 U B 253 89.258 117.315 3.669 1.00 49.27 O
ATOM 5 O5' U B 253 88.626 119.675 3.190 1.00 48.50 O
ATOM 6 C5' U B 253 88.474 121.050 3.604 1.00 48.79 C
ATOM 7 C4' U B 253 88.070 121.899 2.425 1.00 49.91 C
ATOM 8 O4' U B 253 89.194 122.035 1.515 1.00 50.28 O
ATOM 9 C3' U B 253 86.975 121.281 1.578 1.00 49.64 C
ATOM 10 O3' U B 253 85.690 121.560 2.109 1.00 50.01 O
ATOM 11 C2' U B 253 87.207 121.914 0.212 1.00 47.85 C
ATOM 12 O2' U B 253 86.662 123.211 0.120 1.00 46.15 O
ATOM 13 C1' U B 253 88.736 121.976 0.171 1.00 47.19 C
ATOM 14 N1 U B 253 89.373 120.818 -0.482 1.00 46.23 N
ATOM 15 C2 U B 253 89.226 120.677 -1.856 1.00 45.26 C
ATOM 16 O2 U B 253 88.606 121.470 -2.542 1.00 46.72 O
ATOM 17 N3 U B 253 89.833 119.573 -2.393 1.00 42.76 N
ATOM 18 C4 U B 253 90.559 118.617 -1.718 1.00 46.11 C
ATOM 19 O4 U B 253 91.041 117.670 -2.342 1.00 45.68 O
ATOM 20 C5 U B 253 90.679 118.839 -0.307 1.00 45.73 C
ATOM 21 C6 U B 253 90.096 119.900 0.246 1.00 44.43 C
ATOM 22 P G B 254 84.569 120.419 2.094 1.00 50.47 P
ATOM 23 OP1 G B 254 83.302 121.072 2.524 1.00 50.11 O
ATOM 24 OP2 G B 254 85.086 119.237 2.834 1.00 49.59 O
ATOM 25 O5' G B 254 84.459 119.987 0.560 1.00 53.96 O
TER
Atoms:
OP1: (93.957,112.241,-11.324)
OP2: (94.614,110.911,-9.220)
C3': (93.768,115.933,-8.302)
C1': (93.343,115.117,-6.123)
C5': (92.363,114.011,-9.216)
O6: (94.257,111.540,-1.402)
O4': (92.236,114.744,-6.915)
C8: (94.248,112.840,-5.480)
C2: (92.681,114.689,-1.848)
C6: (93.825,112.530,-2.000)
C5: (93.896,112.825,-3.384)
C4: (93.373,114.015,-3.839)
P: (93.682,111.845,-9.912)
C4': (92.438,115.194,-8.284)
C2': (94.495,115.359,-7.094)
O2': (95.456,116.234,-6.537)
N1: (93.182,113.539,-1.297)
N2: (92.085,115.536,-0.996)
N3: (92.755,114.986,-3.135)
N7: (94.435,112.091,-4.430)
N9: (93.631,114.031,-5.191)
O5': (93.520,113.171,-9.048)
O3': (93.557,117.326,-8.170)
OP2: (94.614,110.911,-9.220)
C3': (93.768,115.933,-8.302)
C1': (93.343,115.117,-6.123)
C5': (92.363,114.011,-9.216)
O6: (94.257,111.540,-1.402)
O4': (92.236,114.744,-6.915)
C8: (94.248,112.840,-5.480)
C2: (92.681,114.689,-1.848)
C6: (93.825,112.530,-2.000)
C5: (93.896,112.825,-3.384)
C4: (93.373,114.015,-3.839)
P: (93.682,111.845,-9.912)
C4': (92.438,115.194,-8.284)
C2': (94.495,115.359,-7.094)
O2': (95.456,116.234,-6.537)
N1: (93.182,113.539,-1.297)
N2: (92.085,115.536,-0.996)
N3: (92.755,114.986,-3.135)
N7: (94.435,112.091,-4.430)
N9: (93.631,114.031,-5.191)
O5': (93.520,113.171,-9.048)
O3': (93.557,117.326,-8.170)
C4: (90.559,118.617,-1.718)
N3: (89.833,119.573,-2.393)
OP1: (89.913,119.192,5.286)
OP2: (89.258,117.315,3.669)
C2: (89.226,120.677,-1.856)
C1': (88.736,121.976,0.171)
C3': (86.975,121.281,1.578)
O5': (88.626,119.675,3.190)
O4': (89.194,122.035,1.515)
C5': (88.474,121.050,3.604)
P: (89.683,118.713,3.894)
C4': (88.070,121.899,2.425)
C2': (87.207,121.914,0.212)
O2': (86.662,123.211,0.120)
N1: (89.373,120.818,-0.482)
O4: (91.041,117.670,-2.342)
O2: (88.606,121.470,-2.542)
C6: (90.096,119.900,0.246)
C5: (90.679,118.839,-0.307)
O3': (85.690,121.560,2.109)
N3: (89.833,119.573,-2.393)
OP1: (89.913,119.192,5.286)
OP2: (89.258,117.315,3.669)
C2: (89.226,120.677,-1.856)
C1': (88.736,121.976,0.171)
C3': (86.975,121.281,1.578)
O5': (88.626,119.675,3.190)
O4': (89.194,122.035,1.515)
C5': (88.474,121.050,3.604)
P: (89.683,118.713,3.894)
C4': (88.070,121.899,2.425)
C2': (87.207,121.914,0.212)
O2': (86.662,123.211,0.120)
N1: (89.373,120.818,-0.482)
O4: (91.041,117.670,-2.342)
O2: (88.606,121.470,-2.542)
C6: (90.096,119.900,0.246)
C5: (90.679,118.839,-0.307)
O3': (85.690,121.560,2.109)
Image (generated by PyMOL):