Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0234:0253
Extra
PDB:
ATOM 1 O3' C A 233 92.148 111.187 -9.902 1.00 67.43 O
ATOM 2 P G A 234 93.619 111.829 -9.944 1.00 68.67 P
ATOM 3 OP1 G A 234 93.909 112.268 -11.344 1.00 70.80 O
ATOM 4 OP2 G A 234 94.542 110.880 -9.267 1.00 65.03 O
ATOM 5 O5' G A 234 93.450 113.130 -9.044 1.00 67.67 O
ATOM 6 C5' G A 234 92.310 113.993 -9.226 1.00 67.23 C
ATOM 7 C4' G A 234 92.389 115.170 -8.290 1.00 67.52 C
ATOM 8 O4' G A 234 92.173 114.714 -6.927 1.00 67.80 O
ATOM 9 C3' G A 234 93.723 115.908 -8.294 1.00 67.40 C
ATOM 10 O3' G A 234 93.514 117.303 -8.176 1.00 68.45 O
ATOM 11 C2' G A 234 94.434 115.336 -7.076 1.00 66.83 C
ATOM 12 O2' G A 234 95.378 116.215 -6.502 1.00 66.15 O
ATOM 13 C1' G A 234 93.269 115.088 -6.121 1.00 67.07 C
ATOM 14 N9 G A 234 93.549 114.002 -5.187 1.00 66.47 N
ATOM 15 C8 G A 234 94.171 112.810 -5.471 1.00 67.57 C
ATOM 16 N7 G A 234 94.360 112.067 -4.417 1.00 68.34 N
ATOM 17 C5 G A 234 93.814 112.803 -3.376 1.00 67.15 C
ATOM 18 C6 G A 234 93.745 112.516 -1.993 1.00 66.34 C
ATOM 19 O6 G A 234 94.185 111.533 -1.389 1.00 65.98 O
ATOM 20 N1 G A 234 93.092 113.525 -1.295 1.00 65.50 N
ATOM 21 C2 G A 234 92.581 114.669 -1.854 1.00 65.98 C
ATOM 22 N2 G A 234 91.972 115.518 -1.013 1.00 65.71 N
ATOM 23 N3 G A 234 92.659 114.959 -3.143 1.00 65.79 N
ATOM 24 C4 G A 234 93.284 113.988 -3.839 1.00 66.32 C
ATOM 25 P A A 235 93.944 118.262 -9.390 1.00 68.55 P
ATOM 26 OP1 A A 235 93.409 117.665 -10.643 1.00 69.92 O
ATOM 27 OP2 A A 235 95.402 118.518 -9.269 1.00 67.58 O
ATOM 28 O5' A A 235 93.144 119.608 -9.108 1.00 67.23 O
TER
ATOM 1 O3' G B 252 90.901 118.857 3.022 1.00 52.53 O
ATOM 2 P U B 253 89.560 118.675 3.882 1.00 52.63 P
ATOM 3 OP1 U B 253 89.847 119.211 5.236 1.00 51.53 O
ATOM 4 OP2 U B 253 89.111 117.272 3.734 1.00 52.59 O
ATOM 5 O5' U B 253 88.508 119.631 3.158 1.00 52.46 O
ATOM 6 C5' U B 253 88.342 121.007 3.570 1.00 53.13 C
ATOM 7 C4' U B 253 87.940 121.858 2.392 1.00 54.39 C
ATOM 8 O4' U B 253 89.066 122.005 1.486 1.00 54.79 O
ATOM 9 C3' U B 253 86.851 121.244 1.533 1.00 54.82 C
ATOM 10 O3' U B 253 85.558 121.470 2.064 1.00 54.50 O
ATOM 11 C2' U B 253 87.080 121.906 0.183 1.00 53.05 C
ATOM 12 O2' U B 253 86.546 123.210 0.117 1.00 52.25 O
ATOM 13 C1' U B 253 88.609 121.961 0.141 1.00 52.84 C
ATOM 14 N1 U B 253 89.228 120.795 -0.517 1.00 52.04 N
ATOM 15 C2 U B 253 89.041 120.637 -1.885 1.00 51.15 C
ATOM 16 O2 U B 253 88.393 121.416 -2.565 1.00 52.58 O
ATOM 17 N3 U B 253 89.641 119.531 -2.426 1.00 49.60 N
ATOM 18 C4 U B 253 90.397 118.592 -1.763 1.00 52.14 C
ATOM 19 O4 U B 253 90.875 117.648 -2.391 1.00 52.44 O
ATOM 20 C5 U B 253 90.549 118.827 -0.357 1.00 51.86 C
ATOM 21 C6 U B 253 89.973 119.889 0.200 1.00 49.83 C
ATOM 22 P G B 254 84.487 120.279 2.045 1.00 55.87 P
ATOM 23 OP1 G B 254 83.193 120.857 2.506 1.00 55.78 O
ATOM 24 OP2 G B 254 85.073 119.107 2.747 1.00 56.03 O
ATOM 25 O5' G B 254 84.370 119.881 0.503 1.00 58.65 O
TER
ATOM 2 P G A 234 93.619 111.829 -9.944 1.00 68.67 P
ATOM 3 OP1 G A 234 93.909 112.268 -11.344 1.00 70.80 O
ATOM 4 OP2 G A 234 94.542 110.880 -9.267 1.00 65.03 O
ATOM 5 O5' G A 234 93.450 113.130 -9.044 1.00 67.67 O
ATOM 6 C5' G A 234 92.310 113.993 -9.226 1.00 67.23 C
ATOM 7 C4' G A 234 92.389 115.170 -8.290 1.00 67.52 C
ATOM 8 O4' G A 234 92.173 114.714 -6.927 1.00 67.80 O
ATOM 9 C3' G A 234 93.723 115.908 -8.294 1.00 67.40 C
ATOM 10 O3' G A 234 93.514 117.303 -8.176 1.00 68.45 O
ATOM 11 C2' G A 234 94.434 115.336 -7.076 1.00 66.83 C
ATOM 12 O2' G A 234 95.378 116.215 -6.502 1.00 66.15 O
ATOM 13 C1' G A 234 93.269 115.088 -6.121 1.00 67.07 C
ATOM 14 N9 G A 234 93.549 114.002 -5.187 1.00 66.47 N
ATOM 15 C8 G A 234 94.171 112.810 -5.471 1.00 67.57 C
ATOM 16 N7 G A 234 94.360 112.067 -4.417 1.00 68.34 N
ATOM 17 C5 G A 234 93.814 112.803 -3.376 1.00 67.15 C
ATOM 18 C6 G A 234 93.745 112.516 -1.993 1.00 66.34 C
ATOM 19 O6 G A 234 94.185 111.533 -1.389 1.00 65.98 O
ATOM 20 N1 G A 234 93.092 113.525 -1.295 1.00 65.50 N
ATOM 21 C2 G A 234 92.581 114.669 -1.854 1.00 65.98 C
ATOM 22 N2 G A 234 91.972 115.518 -1.013 1.00 65.71 N
ATOM 23 N3 G A 234 92.659 114.959 -3.143 1.00 65.79 N
ATOM 24 C4 G A 234 93.284 113.988 -3.839 1.00 66.32 C
ATOM 25 P A A 235 93.944 118.262 -9.390 1.00 68.55 P
ATOM 26 OP1 A A 235 93.409 117.665 -10.643 1.00 69.92 O
ATOM 27 OP2 A A 235 95.402 118.518 -9.269 1.00 67.58 O
ATOM 28 O5' A A 235 93.144 119.608 -9.108 1.00 67.23 O
TER
ATOM 1 O3' G B 252 90.901 118.857 3.022 1.00 52.53 O
ATOM 2 P U B 253 89.560 118.675 3.882 1.00 52.63 P
ATOM 3 OP1 U B 253 89.847 119.211 5.236 1.00 51.53 O
ATOM 4 OP2 U B 253 89.111 117.272 3.734 1.00 52.59 O
ATOM 5 O5' U B 253 88.508 119.631 3.158 1.00 52.46 O
ATOM 6 C5' U B 253 88.342 121.007 3.570 1.00 53.13 C
ATOM 7 C4' U B 253 87.940 121.858 2.392 1.00 54.39 C
ATOM 8 O4' U B 253 89.066 122.005 1.486 1.00 54.79 O
ATOM 9 C3' U B 253 86.851 121.244 1.533 1.00 54.82 C
ATOM 10 O3' U B 253 85.558 121.470 2.064 1.00 54.50 O
ATOM 11 C2' U B 253 87.080 121.906 0.183 1.00 53.05 C
ATOM 12 O2' U B 253 86.546 123.210 0.117 1.00 52.25 O
ATOM 13 C1' U B 253 88.609 121.961 0.141 1.00 52.84 C
ATOM 14 N1 U B 253 89.228 120.795 -0.517 1.00 52.04 N
ATOM 15 C2 U B 253 89.041 120.637 -1.885 1.00 51.15 C
ATOM 16 O2 U B 253 88.393 121.416 -2.565 1.00 52.58 O
ATOM 17 N3 U B 253 89.641 119.531 -2.426 1.00 49.60 N
ATOM 18 C4 U B 253 90.397 118.592 -1.763 1.00 52.14 C
ATOM 19 O4 U B 253 90.875 117.648 -2.391 1.00 52.44 O
ATOM 20 C5 U B 253 90.549 118.827 -0.357 1.00 51.86 C
ATOM 21 C6 U B 253 89.973 119.889 0.200 1.00 49.83 C
ATOM 22 P G B 254 84.487 120.279 2.045 1.00 55.87 P
ATOM 23 OP1 G B 254 83.193 120.857 2.506 1.00 55.78 O
ATOM 24 OP2 G B 254 85.073 119.107 2.747 1.00 56.03 O
ATOM 25 O5' G B 254 84.370 119.881 0.503 1.00 58.65 O
TER
Atoms:
OP1: (93.909,112.268,-11.344)
OP2: (94.542,110.880,-9.267)
C3': (93.723,115.908,-8.294)
C1': (93.269,115.088,-6.121)
C5': (92.310,113.993,-9.226)
O6: (94.185,111.533,-1.389)
O4': (92.173,114.714,-6.927)
C8: (94.171,112.810,-5.471)
C2: (92.581,114.669,-1.854)
C6: (93.745,112.516,-1.993)
C5: (93.814,112.803,-3.376)
C4: (93.284,113.988,-3.839)
P: (93.619,111.829,-9.944)
C4': (92.389,115.170,-8.290)
C2': (94.434,115.336,-7.076)
O2': (95.378,116.215,-6.502)
N1: (93.092,113.525,-1.295)
N2: (91.972,115.518,-1.013)
N3: (92.659,114.959,-3.143)
N7: (94.360,112.067,-4.417)
N9: (93.549,114.002,-5.187)
O5': (93.450,113.130,-9.044)
O3': (93.514,117.303,-8.176)
OP2: (94.542,110.880,-9.267)
C3': (93.723,115.908,-8.294)
C1': (93.269,115.088,-6.121)
C5': (92.310,113.993,-9.226)
O6: (94.185,111.533,-1.389)
O4': (92.173,114.714,-6.927)
C8: (94.171,112.810,-5.471)
C2: (92.581,114.669,-1.854)
C6: (93.745,112.516,-1.993)
C5: (93.814,112.803,-3.376)
C4: (93.284,113.988,-3.839)
P: (93.619,111.829,-9.944)
C4': (92.389,115.170,-8.290)
C2': (94.434,115.336,-7.076)
O2': (95.378,116.215,-6.502)
N1: (93.092,113.525,-1.295)
N2: (91.972,115.518,-1.013)
N3: (92.659,114.959,-3.143)
N7: (94.360,112.067,-4.417)
N9: (93.549,114.002,-5.187)
O5': (93.450,113.130,-9.044)
O3': (93.514,117.303,-8.176)
C4: (90.397,118.592,-1.763)
N3: (89.641,119.531,-2.426)
OP1: (89.847,119.211,5.236)
OP2: (89.111,117.272,3.734)
C2: (89.041,120.637,-1.885)
C1': (88.609,121.961,0.141)
C3': (86.851,121.244,1.533)
O5': (88.508,119.631,3.158)
O4': (89.066,122.005,1.486)
C5': (88.342,121.007,3.570)
P: (89.560,118.675,3.882)
C4': (87.940,121.858,2.392)
C2': (87.080,121.906,0.183)
O2': (86.546,123.210,0.117)
N1: (89.228,120.795,-0.517)
O4: (90.875,117.648,-2.391)
O2: (88.393,121.416,-2.565)
C6: (89.973,119.889,0.200)
C5: (90.549,118.827,-0.357)
O3': (85.558,121.470,2.064)
N3: (89.641,119.531,-2.426)
OP1: (89.847,119.211,5.236)
OP2: (89.111,117.272,3.734)
C2: (89.041,120.637,-1.885)
C1': (88.609,121.961,0.141)
C3': (86.851,121.244,1.533)
O5': (88.508,119.631,3.158)
O4': (89.066,122.005,1.486)
C5': (88.342,121.007,3.570)
P: (89.560,118.675,3.882)
C4': (87.940,121.858,2.392)
C2': (87.080,121.906,0.183)
O2': (86.546,123.210,0.117)
N1: (89.228,120.795,-0.517)
O4: (90.875,117.648,-2.391)
O2: (88.393,121.416,-2.565)
C6: (89.973,119.889,0.200)
C5: (90.549,118.827,-0.357)
O3': (85.558,121.470,2.064)
Image (generated by PyMOL):