Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0234:0253
Extra
PDB:
ATOM 1 O3' C A 233 92.266 111.322 -9.900 1.00 67.09 O
ATOM 2 P G A 234 93.766 111.889 -9.920 1.00 67.64 P
ATOM 3 OP1 G A 234 94.142 112.227 -11.326 1.00 69.22 O
ATOM 4 OP2 G A 234 94.599 110.928 -9.150 1.00 65.02 O
ATOM 5 O5' G A 234 93.626 113.245 -9.098 1.00 65.73 O
ATOM 6 C5' G A 234 92.494 114.110 -9.320 1.00 65.04 C
ATOM 7 C4' G A 234 92.536 115.281 -8.374 1.00 65.29 C
ATOM 8 O4' G A 234 92.310 114.803 -7.019 1.00 65.22 O
ATOM 9 C3' G A 234 93.857 116.043 -8.347 1.00 65.38 C
ATOM 10 O3' G A 234 93.624 117.435 -8.196 1.00 66.90 O
ATOM 11 C2' G A 234 94.561 115.460 -7.132 1.00 64.64 C
ATOM 12 O2' G A 234 95.496 116.335 -6.535 1.00 63.39 O
ATOM 13 C1' G A 234 93.387 115.190 -6.195 1.00 65.03 C
ATOM 14 N9 G A 234 93.665 114.113 -5.252 1.00 64.77 N
ATOM 15 C8 G A 234 94.286 112.916 -5.515 1.00 65.54 C
ATOM 16 N7 G A 234 94.471 112.190 -4.449 1.00 66.88 N
ATOM 17 C5 G A 234 93.921 112.945 -3.421 1.00 66.61 C
ATOM 18 C6 G A 234 93.846 112.684 -2.030 1.00 66.70 C
ATOM 19 O6 G A 234 94.279 111.708 -1.405 1.00 66.66 O
ATOM 20 N1 G A 234 93.198 113.712 -1.354 1.00 66.38 N
ATOM 21 C2 G A 234 92.701 114.851 -1.938 1.00 66.45 C
ATOM 22 N2 G A 234 92.108 115.732 -1.117 1.00 66.19 N
ATOM 23 N3 G A 234 92.778 115.110 -3.230 1.00 66.34 N
ATOM 24 C4 G A 234 93.398 114.122 -3.906 1.00 65.43 C
ATOM 25 P A A 235 94.082 118.436 -9.366 1.00 66.59 P
ATOM 26 OP1 A A 235 93.585 117.878 -10.653 1.00 68.01 O
ATOM 27 OP2 A A 235 95.534 118.691 -9.193 1.00 64.46 O
ATOM 28 O5' A A 235 93.276 119.773 -9.066 1.00 66.13 O
TER
ATOM 1 O3' G B 252 91.041 119.059 3.060 1.00 49.94 O
ATOM 2 P U B 253 89.694 118.848 3.910 1.00 50.40 P
ATOM 3 OP1 U B 253 89.959 119.356 5.282 1.00 48.67 O
ATOM 4 OP2 U B 253 89.252 117.445 3.725 1.00 50.64 O
ATOM 5 O5' U B 253 88.627 119.796 3.198 1.00 51.49 O
ATOM 6 C5' U B 253 88.448 121.170 3.609 1.00 52.26 C
ATOM 7 C4' U B 253 88.044 122.020 2.427 1.00 53.67 C
ATOM 8 O4' U B 253 89.168 122.157 1.517 1.00 53.47 O
ATOM 9 C3' U B 253 86.947 121.421 1.566 1.00 53.73 C
ATOM 10 O3' U B 253 85.649 121.651 2.090 1.00 53.90 O
ATOM 11 C2' U B 253 87.174 122.086 0.217 1.00 51.74 C
ATOM 12 O2' U B 253 86.636 123.390 0.153 1.00 51.90 O
ATOM 13 C1' U B 253 88.703 122.134 0.172 1.00 51.08 C
ATOM 14 N1 U B 253 89.312 120.976 -0.506 1.00 49.77 N
ATOM 15 C2 U B 253 89.152 120.866 -1.883 1.00 48.87 C
ATOM 16 O2 U B 253 88.533 121.680 -2.551 1.00 49.55 O
ATOM 17 N3 U B 253 89.737 119.762 -2.444 1.00 46.81 N
ATOM 18 C4 U B 253 90.445 118.775 -1.793 1.00 49.12 C
ATOM 19 O4 U B 253 90.899 117.826 -2.438 1.00 48.86 O
ATOM 20 C5 U B 253 90.578 118.966 -0.379 1.00 48.67 C
ATOM 21 C6 U B 253 90.024 120.031 0.199 1.00 47.62 C
ATOM 22 P G B 254 84.588 120.448 2.099 1.00 54.88 P
ATOM 23 OP1 G B 254 83.299 121.004 2.588 1.00 53.25 O
ATOM 24 OP2 G B 254 85.220 119.296 2.797 1.00 53.35 O
ATOM 25 O5' G B 254 84.441 120.027 0.566 1.00 56.68 O
TER
ATOM 2 P G A 234 93.766 111.889 -9.920 1.00 67.64 P
ATOM 3 OP1 G A 234 94.142 112.227 -11.326 1.00 69.22 O
ATOM 4 OP2 G A 234 94.599 110.928 -9.150 1.00 65.02 O
ATOM 5 O5' G A 234 93.626 113.245 -9.098 1.00 65.73 O
ATOM 6 C5' G A 234 92.494 114.110 -9.320 1.00 65.04 C
ATOM 7 C4' G A 234 92.536 115.281 -8.374 1.00 65.29 C
ATOM 8 O4' G A 234 92.310 114.803 -7.019 1.00 65.22 O
ATOM 9 C3' G A 234 93.857 116.043 -8.347 1.00 65.38 C
ATOM 10 O3' G A 234 93.624 117.435 -8.196 1.00 66.90 O
ATOM 11 C2' G A 234 94.561 115.460 -7.132 1.00 64.64 C
ATOM 12 O2' G A 234 95.496 116.335 -6.535 1.00 63.39 O
ATOM 13 C1' G A 234 93.387 115.190 -6.195 1.00 65.03 C
ATOM 14 N9 G A 234 93.665 114.113 -5.252 1.00 64.77 N
ATOM 15 C8 G A 234 94.286 112.916 -5.515 1.00 65.54 C
ATOM 16 N7 G A 234 94.471 112.190 -4.449 1.00 66.88 N
ATOM 17 C5 G A 234 93.921 112.945 -3.421 1.00 66.61 C
ATOM 18 C6 G A 234 93.846 112.684 -2.030 1.00 66.70 C
ATOM 19 O6 G A 234 94.279 111.708 -1.405 1.00 66.66 O
ATOM 20 N1 G A 234 93.198 113.712 -1.354 1.00 66.38 N
ATOM 21 C2 G A 234 92.701 114.851 -1.938 1.00 66.45 C
ATOM 22 N2 G A 234 92.108 115.732 -1.117 1.00 66.19 N
ATOM 23 N3 G A 234 92.778 115.110 -3.230 1.00 66.34 N
ATOM 24 C4 G A 234 93.398 114.122 -3.906 1.00 65.43 C
ATOM 25 P A A 235 94.082 118.436 -9.366 1.00 66.59 P
ATOM 26 OP1 A A 235 93.585 117.878 -10.653 1.00 68.01 O
ATOM 27 OP2 A A 235 95.534 118.691 -9.193 1.00 64.46 O
ATOM 28 O5' A A 235 93.276 119.773 -9.066 1.00 66.13 O
TER
ATOM 1 O3' G B 252 91.041 119.059 3.060 1.00 49.94 O
ATOM 2 P U B 253 89.694 118.848 3.910 1.00 50.40 P
ATOM 3 OP1 U B 253 89.959 119.356 5.282 1.00 48.67 O
ATOM 4 OP2 U B 253 89.252 117.445 3.725 1.00 50.64 O
ATOM 5 O5' U B 253 88.627 119.796 3.198 1.00 51.49 O
ATOM 6 C5' U B 253 88.448 121.170 3.609 1.00 52.26 C
ATOM 7 C4' U B 253 88.044 122.020 2.427 1.00 53.67 C
ATOM 8 O4' U B 253 89.168 122.157 1.517 1.00 53.47 O
ATOM 9 C3' U B 253 86.947 121.421 1.566 1.00 53.73 C
ATOM 10 O3' U B 253 85.649 121.651 2.090 1.00 53.90 O
ATOM 11 C2' U B 253 87.174 122.086 0.217 1.00 51.74 C
ATOM 12 O2' U B 253 86.636 123.390 0.153 1.00 51.90 O
ATOM 13 C1' U B 253 88.703 122.134 0.172 1.00 51.08 C
ATOM 14 N1 U B 253 89.312 120.976 -0.506 1.00 49.77 N
ATOM 15 C2 U B 253 89.152 120.866 -1.883 1.00 48.87 C
ATOM 16 O2 U B 253 88.533 121.680 -2.551 1.00 49.55 O
ATOM 17 N3 U B 253 89.737 119.762 -2.444 1.00 46.81 N
ATOM 18 C4 U B 253 90.445 118.775 -1.793 1.00 49.12 C
ATOM 19 O4 U B 253 90.899 117.826 -2.438 1.00 48.86 O
ATOM 20 C5 U B 253 90.578 118.966 -0.379 1.00 48.67 C
ATOM 21 C6 U B 253 90.024 120.031 0.199 1.00 47.62 C
ATOM 22 P G B 254 84.588 120.448 2.099 1.00 54.88 P
ATOM 23 OP1 G B 254 83.299 121.004 2.588 1.00 53.25 O
ATOM 24 OP2 G B 254 85.220 119.296 2.797 1.00 53.35 O
ATOM 25 O5' G B 254 84.441 120.027 0.566 1.00 56.68 O
TER
Atoms:
OP1: (94.142,112.227,-11.326)
OP2: (94.599,110.928,-9.150)
C3': (93.857,116.043,-8.347)
C1': (93.387,115.190,-6.195)
C5': (92.494,114.110,-9.320)
O6: (94.279,111.708,-1.405)
O4': (92.310,114.803,-7.019)
C8: (94.286,112.916,-5.515)
C2: (92.701,114.851,-1.938)
C6: (93.846,112.684,-2.030)
C5: (93.921,112.945,-3.421)
C4: (93.398,114.122,-3.906)
P: (93.766,111.889,-9.920)
C4': (92.536,115.281,-8.374)
C2': (94.561,115.460,-7.132)
O2': (95.496,116.335,-6.535)
N1: (93.198,113.712,-1.354)
N2: (92.108,115.732,-1.117)
N3: (92.778,115.110,-3.230)
N7: (94.471,112.190,-4.449)
N9: (93.665,114.113,-5.252)
O5': (93.626,113.245,-9.098)
O3': (93.624,117.435,-8.196)
OP2: (94.599,110.928,-9.150)
C3': (93.857,116.043,-8.347)
C1': (93.387,115.190,-6.195)
C5': (92.494,114.110,-9.320)
O6: (94.279,111.708,-1.405)
O4': (92.310,114.803,-7.019)
C8: (94.286,112.916,-5.515)
C2: (92.701,114.851,-1.938)
C6: (93.846,112.684,-2.030)
C5: (93.921,112.945,-3.421)
C4: (93.398,114.122,-3.906)
P: (93.766,111.889,-9.920)
C4': (92.536,115.281,-8.374)
C2': (94.561,115.460,-7.132)
O2': (95.496,116.335,-6.535)
N1: (93.198,113.712,-1.354)
N2: (92.108,115.732,-1.117)
N3: (92.778,115.110,-3.230)
N7: (94.471,112.190,-4.449)
N9: (93.665,114.113,-5.252)
O5': (93.626,113.245,-9.098)
O3': (93.624,117.435,-8.196)
C4: (90.445,118.775,-1.793)
N3: (89.737,119.762,-2.444)
OP1: (89.959,119.356,5.282)
OP2: (89.252,117.445,3.725)
C2: (89.152,120.866,-1.883)
C1': (88.703,122.134,0.172)
C3': (86.947,121.421,1.566)
O5': (88.627,119.796,3.198)
O4': (89.168,122.157,1.517)
C5': (88.448,121.170,3.609)
P: (89.694,118.848,3.910)
C4': (88.044,122.020,2.427)
C2': (87.174,122.086,0.217)
O2': (86.636,123.390,0.153)
N1: (89.312,120.976,-0.506)
O4: (90.899,117.826,-2.438)
O2: (88.533,121.680,-2.551)
C6: (90.024,120.031,0.199)
C5: (90.578,118.966,-0.379)
O3': (85.649,121.651,2.090)
N3: (89.737,119.762,-2.444)
OP1: (89.959,119.356,5.282)
OP2: (89.252,117.445,3.725)
C2: (89.152,120.866,-1.883)
C1': (88.703,122.134,0.172)
C3': (86.947,121.421,1.566)
O5': (88.627,119.796,3.198)
O4': (89.168,122.157,1.517)
C5': (88.448,121.170,3.609)
P: (89.694,118.848,3.910)
C4': (88.044,122.020,2.427)
C2': (87.174,122.086,0.217)
O2': (86.636,123.390,0.153)
N1: (89.312,120.976,-0.506)
O4: (90.899,117.826,-2.438)
O2: (88.533,121.680,-2.551)
C6: (90.024,120.031,0.199)
C5: (90.578,118.966,-0.379)
O3': (85.649,121.651,2.090)
Image (generated by PyMOL):