Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:0234:0253
Extra
PDB:
ATOM 1 O3' C A 233 92.291 111.715 -9.913 1.00 64.95 O
ATOM 2 P G A 234 93.761 112.352 -9.964 1.00 66.30 P
ATOM 3 OP1 G A 234 94.051 112.777 -11.368 1.00 68.53 O
ATOM 4 OP2 G A 234 94.682 111.406 -9.277 1.00 63.55 O
ATOM 5 O5' G A 234 93.601 113.663 -9.082 1.00 64.11 O
ATOM 6 C5' G A 234 92.483 114.540 -9.292 1.00 63.43 C
ATOM 7 C4' G A 234 92.557 115.705 -8.345 1.00 63.43 C
ATOM 8 O4' G A 234 92.319 115.228 -6.992 1.00 63.95 O
ATOM 9 C3' G A 234 93.901 116.424 -8.321 1.00 62.93 C
ATOM 10 O3' G A 234 93.706 117.819 -8.176 1.00 63.44 O
ATOM 11 C2' G A 234 94.588 115.822 -7.101 1.00 62.76 C
ATOM 12 O2' G A 234 95.540 116.675 -6.497 1.00 62.33 O
ATOM 13 C1' G A 234 93.407 115.581 -6.166 1.00 63.11 C
ATOM 14 N9 G A 234 93.660 114.486 -5.234 1.00 63.39 N
ATOM 15 C8 G A 234 94.230 113.270 -5.524 1.00 63.67 C
ATOM 16 N7 G A 234 94.411 112.525 -4.470 1.00 64.69 N
ATOM 17 C5 G A 234 93.912 113.287 -3.422 1.00 64.09 C
ATOM 18 C6 G A 234 93.856 113.009 -2.033 1.00 63.72 C
ATOM 19 O6 G A 234 94.264 112.011 -1.430 1.00 63.25 O
ATOM 20 N1 G A 234 93.260 114.048 -1.329 1.00 63.82 N
ATOM 21 C2 G A 234 92.786 115.209 -1.886 1.00 64.24 C
ATOM 22 N2 G A 234 92.236 116.087 -1.036 1.00 65.21 N
ATOM 23 N3 G A 234 92.846 115.488 -3.177 1.00 63.28 N
ATOM 24 C4 G A 234 93.420 114.489 -3.881 1.00 63.40 C
ATOM 25 P A A 235 94.196 118.803 -9.346 1.00 62.46 P
ATOM 26 OP1 A A 235 93.709 118.241 -10.632 1.00 64.15 O
ATOM 27 OP2 A A 235 95.653 119.026 -9.146 1.00 61.35 O
ATOM 28 O5' A A 235 93.401 120.155 -9.072 1.00 61.35 O
TER
ATOM 1 O3' G B 252 91.063 119.336 3.021 1.00 50.19 O
ATOM 2 P U B 253 89.733 119.180 3.906 1.00 53.48 P
ATOM 3 OP1 U B 253 90.068 119.715 5.256 1.00 51.22 O
ATOM 4 OP2 U B 253 89.234 117.784 3.778 1.00 52.61 O
ATOM 5 O5' U B 253 88.689 120.148 3.188 1.00 50.40 O
ATOM 6 C5' U B 253 88.524 121.519 3.608 1.00 51.12 C
ATOM 7 C4' U B 253 88.117 122.375 2.431 1.00 51.98 C
ATOM 8 O4' U B 253 89.245 122.529 1.527 1.00 53.45 O
ATOM 9 C3' U B 253 87.023 121.771 1.569 1.00 51.13 C
ATOM 10 O3' U B 253 85.731 122.028 2.093 1.00 50.07 O
ATOM 11 C2' U B 253 87.260 122.432 0.218 1.00 50.03 C
ATOM 12 O2' U B 253 86.730 123.740 0.147 1.00 46.50 O
ATOM 13 C1' U B 253 88.789 122.486 0.181 1.00 49.39 C
ATOM 14 N1 U B 253 89.410 121.327 -0.482 1.00 49.69 N
ATOM 15 C2 U B 253 89.316 121.237 -1.866 1.00 49.11 C
ATOM 16 O2 U B 253 88.743 122.067 -2.550 1.00 49.94 O
ATOM 17 N3 U B 253 89.920 120.139 -2.416 1.00 47.82 N
ATOM 18 C4 U B 253 90.599 119.143 -1.750 1.00 50.19 C
ATOM 19 O4 U B 253 91.096 118.217 -2.393 1.00 48.75 O
ATOM 20 C5 U B 253 90.654 119.303 -0.326 1.00 49.24 C
ATOM 21 C6 U B 253 90.070 120.359 0.242 1.00 48.12 C
ATOM 22 P G B 254 84.632 120.861 2.086 1.00 52.19 P
ATOM 23 OP1 G B 254 83.353 121.489 2.527 1.00 50.64 O
ATOM 24 OP2 G B 254 85.181 119.695 2.827 1.00 50.24 O
ATOM 25 O5' G B 254 84.513 120.423 0.554 1.00 54.75 O
TER
ATOM 2 P G A 234 93.761 112.352 -9.964 1.00 66.30 P
ATOM 3 OP1 G A 234 94.051 112.777 -11.368 1.00 68.53 O
ATOM 4 OP2 G A 234 94.682 111.406 -9.277 1.00 63.55 O
ATOM 5 O5' G A 234 93.601 113.663 -9.082 1.00 64.11 O
ATOM 6 C5' G A 234 92.483 114.540 -9.292 1.00 63.43 C
ATOM 7 C4' G A 234 92.557 115.705 -8.345 1.00 63.43 C
ATOM 8 O4' G A 234 92.319 115.228 -6.992 1.00 63.95 O
ATOM 9 C3' G A 234 93.901 116.424 -8.321 1.00 62.93 C
ATOM 10 O3' G A 234 93.706 117.819 -8.176 1.00 63.44 O
ATOM 11 C2' G A 234 94.588 115.822 -7.101 1.00 62.76 C
ATOM 12 O2' G A 234 95.540 116.675 -6.497 1.00 62.33 O
ATOM 13 C1' G A 234 93.407 115.581 -6.166 1.00 63.11 C
ATOM 14 N9 G A 234 93.660 114.486 -5.234 1.00 63.39 N
ATOM 15 C8 G A 234 94.230 113.270 -5.524 1.00 63.67 C
ATOM 16 N7 G A 234 94.411 112.525 -4.470 1.00 64.69 N
ATOM 17 C5 G A 234 93.912 113.287 -3.422 1.00 64.09 C
ATOM 18 C6 G A 234 93.856 113.009 -2.033 1.00 63.72 C
ATOM 19 O6 G A 234 94.264 112.011 -1.430 1.00 63.25 O
ATOM 20 N1 G A 234 93.260 114.048 -1.329 1.00 63.82 N
ATOM 21 C2 G A 234 92.786 115.209 -1.886 1.00 64.24 C
ATOM 22 N2 G A 234 92.236 116.087 -1.036 1.00 65.21 N
ATOM 23 N3 G A 234 92.846 115.488 -3.177 1.00 63.28 N
ATOM 24 C4 G A 234 93.420 114.489 -3.881 1.00 63.40 C
ATOM 25 P A A 235 94.196 118.803 -9.346 1.00 62.46 P
ATOM 26 OP1 A A 235 93.709 118.241 -10.632 1.00 64.15 O
ATOM 27 OP2 A A 235 95.653 119.026 -9.146 1.00 61.35 O
ATOM 28 O5' A A 235 93.401 120.155 -9.072 1.00 61.35 O
TER
ATOM 1 O3' G B 252 91.063 119.336 3.021 1.00 50.19 O
ATOM 2 P U B 253 89.733 119.180 3.906 1.00 53.48 P
ATOM 3 OP1 U B 253 90.068 119.715 5.256 1.00 51.22 O
ATOM 4 OP2 U B 253 89.234 117.784 3.778 1.00 52.61 O
ATOM 5 O5' U B 253 88.689 120.148 3.188 1.00 50.40 O
ATOM 6 C5' U B 253 88.524 121.519 3.608 1.00 51.12 C
ATOM 7 C4' U B 253 88.117 122.375 2.431 1.00 51.98 C
ATOM 8 O4' U B 253 89.245 122.529 1.527 1.00 53.45 O
ATOM 9 C3' U B 253 87.023 121.771 1.569 1.00 51.13 C
ATOM 10 O3' U B 253 85.731 122.028 2.093 1.00 50.07 O
ATOM 11 C2' U B 253 87.260 122.432 0.218 1.00 50.03 C
ATOM 12 O2' U B 253 86.730 123.740 0.147 1.00 46.50 O
ATOM 13 C1' U B 253 88.789 122.486 0.181 1.00 49.39 C
ATOM 14 N1 U B 253 89.410 121.327 -0.482 1.00 49.69 N
ATOM 15 C2 U B 253 89.316 121.237 -1.866 1.00 49.11 C
ATOM 16 O2 U B 253 88.743 122.067 -2.550 1.00 49.94 O
ATOM 17 N3 U B 253 89.920 120.139 -2.416 1.00 47.82 N
ATOM 18 C4 U B 253 90.599 119.143 -1.750 1.00 50.19 C
ATOM 19 O4 U B 253 91.096 118.217 -2.393 1.00 48.75 O
ATOM 20 C5 U B 253 90.654 119.303 -0.326 1.00 49.24 C
ATOM 21 C6 U B 253 90.070 120.359 0.242 1.00 48.12 C
ATOM 22 P G B 254 84.632 120.861 2.086 1.00 52.19 P
ATOM 23 OP1 G B 254 83.353 121.489 2.527 1.00 50.64 O
ATOM 24 OP2 G B 254 85.181 119.695 2.827 1.00 50.24 O
ATOM 25 O5' G B 254 84.513 120.423 0.554 1.00 54.75 O
TER
Atoms:
OP1: (94.051,112.777,-11.368)
OP2: (94.682,111.406,-9.277)
C3': (93.901,116.424,-8.321)
C1': (93.407,115.581,-6.166)
C5': (92.483,114.540,-9.292)
O6: (94.264,112.011,-1.430)
O4': (92.319,115.228,-6.992)
C8: (94.230,113.270,-5.524)
C2: (92.786,115.209,-1.886)
C6: (93.856,113.009,-2.033)
C5: (93.912,113.287,-3.422)
C4: (93.420,114.489,-3.881)
P: (93.761,112.352,-9.964)
C4': (92.557,115.705,-8.345)
C2': (94.588,115.822,-7.101)
O2': (95.540,116.675,-6.497)
N1: (93.260,114.048,-1.329)
N2: (92.236,116.087,-1.036)
N3: (92.846,115.488,-3.177)
N7: (94.411,112.525,-4.470)
N9: (93.660,114.486,-5.234)
O5': (93.601,113.663,-9.082)
O3': (93.706,117.819,-8.176)
OP2: (94.682,111.406,-9.277)
C3': (93.901,116.424,-8.321)
C1': (93.407,115.581,-6.166)
C5': (92.483,114.540,-9.292)
O6: (94.264,112.011,-1.430)
O4': (92.319,115.228,-6.992)
C8: (94.230,113.270,-5.524)
C2: (92.786,115.209,-1.886)
C6: (93.856,113.009,-2.033)
C5: (93.912,113.287,-3.422)
C4: (93.420,114.489,-3.881)
P: (93.761,112.352,-9.964)
C4': (92.557,115.705,-8.345)
C2': (94.588,115.822,-7.101)
O2': (95.540,116.675,-6.497)
N1: (93.260,114.048,-1.329)
N2: (92.236,116.087,-1.036)
N3: (92.846,115.488,-3.177)
N7: (94.411,112.525,-4.470)
N9: (93.660,114.486,-5.234)
O5': (93.601,113.663,-9.082)
O3': (93.706,117.819,-8.176)
C4: (90.599,119.143,-1.750)
N3: (89.920,120.139,-2.416)
OP1: (90.068,119.715,5.256)
OP2: (89.234,117.784,3.778)
C2: (89.316,121.237,-1.866)
C1': (88.789,122.486,0.181)
C3': (87.023,121.771,1.569)
O5': (88.689,120.148,3.188)
O4': (89.245,122.529,1.527)
C5': (88.524,121.519,3.608)
P: (89.733,119.180,3.906)
C4': (88.117,122.375,2.431)
C2': (87.260,122.432,0.218)
O2': (86.730,123.740,0.147)
N1: (89.410,121.327,-0.482)
O4: (91.096,118.217,-2.393)
O2: (88.743,122.067,-2.550)
C6: (90.070,120.359,0.242)
C5: (90.654,119.303,-0.326)
O3': (85.731,122.028,2.093)
N3: (89.920,120.139,-2.416)
OP1: (90.068,119.715,5.256)
OP2: (89.234,117.784,3.778)
C2: (89.316,121.237,-1.866)
C1': (88.789,122.486,0.181)
C3': (87.023,121.771,1.569)
O5': (88.689,120.148,3.188)
O4': (89.245,122.529,1.527)
C5': (88.524,121.519,3.608)
P: (89.733,119.180,3.906)
C4': (88.117,122.375,2.431)
C2': (87.260,122.432,0.218)
O2': (86.730,123.740,0.147)
N1: (89.410,121.327,-0.482)
O4: (91.096,118.217,-2.393)
O2: (88.743,122.067,-2.550)
C6: (90.070,120.359,0.242)
C5: (90.654,119.303,-0.326)
O3': (85.731,122.028,2.093)
Image (generated by PyMOL):