Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0234:0253
Extra
PDB:
ATOM 1 O3' C A 233 92.674 111.399 -9.663 1.00 49.72 O
ATOM 2 P G A 234 94.142 112.042 -9.708 1.00 52.04 P
ATOM 3 OP1 G A 234 94.444 112.415 -11.119 1.00 54.39 O
ATOM 4 OP2 G A 234 95.062 111.128 -8.978 1.00 48.94 O
ATOM 5 O5' G A 234 93.952 113.384 -8.876 1.00 50.00 O
ATOM 6 C5' G A 234 92.803 114.220 -9.106 1.00 50.37 C
ATOM 7 C4' G A 234 92.825 115.398 -8.172 1.00 51.57 C
ATOM 8 O4' G A 234 92.586 114.926 -6.816 1.00 53.18 O
ATOM 9 C3' G A 234 94.149 116.151 -8.143 1.00 51.72 C
ATOM 10 O3' G A 234 93.927 117.543 -8.003 1.00 52.82 O
ATOM 11 C2' G A 234 94.845 115.565 -6.921 1.00 51.67 C
ATOM 12 O2' G A 234 95.786 116.433 -6.324 1.00 51.48 O
ATOM 13 C1' G A 234 93.668 115.292 -5.987 1.00 51.42 C
ATOM 14 N9 G A 234 93.950 114.191 -5.071 1.00 51.30 N
ATOM 15 C8 G A 234 94.547 112.993 -5.382 1.00 51.34 C
ATOM 16 N7 G A 234 94.778 112.249 -4.337 1.00 52.57 N
ATOM 17 C5 G A 234 94.284 112.988 -3.272 1.00 51.72 C
ATOM 18 C6 G A 234 94.288 112.707 -1.881 1.00 51.88 C
ATOM 19 O6 G A 234 94.773 111.730 -1.294 1.00 49.81 O
ATOM 20 N1 G A 234 93.663 113.717 -1.155 1.00 51.51 N
ATOM 21 C2 G A 234 93.118 114.858 -1.696 1.00 51.17 C
ATOM 22 N2 G A 234 92.538 115.706 -0.833 1.00 50.16 N
ATOM 23 N3 G A 234 93.137 115.144 -2.987 1.00 51.16 N
ATOM 24 C4 G A 234 93.732 114.172 -3.712 1.00 51.40 C
ATOM 25 P A A 235 94.479 118.543 -9.132 1.00 52.81 P
ATOM 26 OP1 A A 235 94.033 118.008 -10.446 1.00 51.67 O
ATOM 27 OP2 A A 235 95.929 118.757 -8.878 1.00 50.28 O
ATOM 28 O5' A A 235 93.691 119.896 -8.855 1.00 50.53 O
TER
ATOM 1 O3' G B 252 91.452 119.074 3.239 1.00 39.37 O
ATOM 2 P U B 253 90.132 118.904 4.130 1.00 39.44 P
ATOM 3 OP1 U B 253 90.450 119.430 5.481 1.00 39.01 O
ATOM 4 OP2 U B 253 89.671 117.503 3.977 1.00 39.19 O
ATOM 5 O5' U B 253 89.071 119.864 3.430 1.00 39.07 O
ATOM 6 C5' U B 253 88.920 121.237 3.832 1.00 39.26 C
ATOM 7 C4' U B 253 88.499 122.074 2.648 1.00 40.58 C
ATOM 8 O4' U B 253 89.616 122.211 1.731 1.00 40.74 O
ATOM 9 C3' U B 253 87.398 121.453 1.808 1.00 40.82 C
ATOM 10 O3' U B 253 86.108 121.711 2.335 1.00 39.74 O
ATOM 11 C2' U B 253 87.619 122.093 0.446 1.00 39.39 C
ATOM 12 O2' U B 253 87.078 123.395 0.371 1.00 39.93 O
ATOM 13 C1' U B 253 89.147 122.150 0.391 1.00 38.70 C
ATOM 14 N1 U B 253 89.767 120.983 -0.260 1.00 37.12 N
ATOM 15 C2 U B 253 89.591 120.828 -1.628 1.00 37.57 C
ATOM 16 O2 U B 253 88.953 121.614 -2.311 1.00 39.75 O
ATOM 17 N3 U B 253 90.191 119.720 -2.165 1.00 36.41 N
ATOM 18 C4 U B 253 90.938 118.774 -1.496 1.00 38.30 C
ATOM 19 O4 U B 253 91.402 117.815 -2.117 1.00 37.78 O
ATOM 20 C5 U B 253 91.078 119.010 -0.090 1.00 37.07 C
ATOM 21 C6 U B 253 90.501 120.074 0.462 1.00 35.01 C
ATOM 22 P G B 254 85.018 120.537 2.355 1.00 41.23 P
ATOM 23 OP1 G B 254 83.727 121.151 2.789 1.00 39.69 O
ATOM 24 OP2 G B 254 85.590 119.392 3.109 1.00 37.36 O
ATOM 25 O5' G B 254 84.878 120.091 0.829 1.00 42.43 O
TER
ATOM 2 P G A 234 94.142 112.042 -9.708 1.00 52.04 P
ATOM 3 OP1 G A 234 94.444 112.415 -11.119 1.00 54.39 O
ATOM 4 OP2 G A 234 95.062 111.128 -8.978 1.00 48.94 O
ATOM 5 O5' G A 234 93.952 113.384 -8.876 1.00 50.00 O
ATOM 6 C5' G A 234 92.803 114.220 -9.106 1.00 50.37 C
ATOM 7 C4' G A 234 92.825 115.398 -8.172 1.00 51.57 C
ATOM 8 O4' G A 234 92.586 114.926 -6.816 1.00 53.18 O
ATOM 9 C3' G A 234 94.149 116.151 -8.143 1.00 51.72 C
ATOM 10 O3' G A 234 93.927 117.543 -8.003 1.00 52.82 O
ATOM 11 C2' G A 234 94.845 115.565 -6.921 1.00 51.67 C
ATOM 12 O2' G A 234 95.786 116.433 -6.324 1.00 51.48 O
ATOM 13 C1' G A 234 93.668 115.292 -5.987 1.00 51.42 C
ATOM 14 N9 G A 234 93.950 114.191 -5.071 1.00 51.30 N
ATOM 15 C8 G A 234 94.547 112.993 -5.382 1.00 51.34 C
ATOM 16 N7 G A 234 94.778 112.249 -4.337 1.00 52.57 N
ATOM 17 C5 G A 234 94.284 112.988 -3.272 1.00 51.72 C
ATOM 18 C6 G A 234 94.288 112.707 -1.881 1.00 51.88 C
ATOM 19 O6 G A 234 94.773 111.730 -1.294 1.00 49.81 O
ATOM 20 N1 G A 234 93.663 113.717 -1.155 1.00 51.51 N
ATOM 21 C2 G A 234 93.118 114.858 -1.696 1.00 51.17 C
ATOM 22 N2 G A 234 92.538 115.706 -0.833 1.00 50.16 N
ATOM 23 N3 G A 234 93.137 115.144 -2.987 1.00 51.16 N
ATOM 24 C4 G A 234 93.732 114.172 -3.712 1.00 51.40 C
ATOM 25 P A A 235 94.479 118.543 -9.132 1.00 52.81 P
ATOM 26 OP1 A A 235 94.033 118.008 -10.446 1.00 51.67 O
ATOM 27 OP2 A A 235 95.929 118.757 -8.878 1.00 50.28 O
ATOM 28 O5' A A 235 93.691 119.896 -8.855 1.00 50.53 O
TER
ATOM 1 O3' G B 252 91.452 119.074 3.239 1.00 39.37 O
ATOM 2 P U B 253 90.132 118.904 4.130 1.00 39.44 P
ATOM 3 OP1 U B 253 90.450 119.430 5.481 1.00 39.01 O
ATOM 4 OP2 U B 253 89.671 117.503 3.977 1.00 39.19 O
ATOM 5 O5' U B 253 89.071 119.864 3.430 1.00 39.07 O
ATOM 6 C5' U B 253 88.920 121.237 3.832 1.00 39.26 C
ATOM 7 C4' U B 253 88.499 122.074 2.648 1.00 40.58 C
ATOM 8 O4' U B 253 89.616 122.211 1.731 1.00 40.74 O
ATOM 9 C3' U B 253 87.398 121.453 1.808 1.00 40.82 C
ATOM 10 O3' U B 253 86.108 121.711 2.335 1.00 39.74 O
ATOM 11 C2' U B 253 87.619 122.093 0.446 1.00 39.39 C
ATOM 12 O2' U B 253 87.078 123.395 0.371 1.00 39.93 O
ATOM 13 C1' U B 253 89.147 122.150 0.391 1.00 38.70 C
ATOM 14 N1 U B 253 89.767 120.983 -0.260 1.00 37.12 N
ATOM 15 C2 U B 253 89.591 120.828 -1.628 1.00 37.57 C
ATOM 16 O2 U B 253 88.953 121.614 -2.311 1.00 39.75 O
ATOM 17 N3 U B 253 90.191 119.720 -2.165 1.00 36.41 N
ATOM 18 C4 U B 253 90.938 118.774 -1.496 1.00 38.30 C
ATOM 19 O4 U B 253 91.402 117.815 -2.117 1.00 37.78 O
ATOM 20 C5 U B 253 91.078 119.010 -0.090 1.00 37.07 C
ATOM 21 C6 U B 253 90.501 120.074 0.462 1.00 35.01 C
ATOM 22 P G B 254 85.018 120.537 2.355 1.00 41.23 P
ATOM 23 OP1 G B 254 83.727 121.151 2.789 1.00 39.69 O
ATOM 24 OP2 G B 254 85.590 119.392 3.109 1.00 37.36 O
ATOM 25 O5' G B 254 84.878 120.091 0.829 1.00 42.43 O
TER
Atoms:
OP1: (94.444,112.415,-11.119)
OP2: (95.062,111.128,-8.978)
C3': (94.149,116.151,-8.143)
C1': (93.668,115.292,-5.987)
C5': (92.803,114.220,-9.106)
O6: (94.773,111.730,-1.294)
O4': (92.586,114.926,-6.816)
C8: (94.547,112.993,-5.382)
C2: (93.118,114.858,-1.696)
C6: (94.288,112.707,-1.881)
C5: (94.284,112.988,-3.272)
C4: (93.732,114.172,-3.712)
P: (94.142,112.042,-9.708)
C4': (92.825,115.398,-8.172)
C2': (94.845,115.565,-6.921)
O2': (95.786,116.433,-6.324)
N1: (93.663,113.717,-1.155)
N2: (92.538,115.706,-0.833)
N3: (93.137,115.144,-2.987)
N7: (94.778,112.249,-4.337)
N9: (93.950,114.191,-5.071)
O5': (93.952,113.384,-8.876)
O3': (93.927,117.543,-8.003)
OP2: (95.062,111.128,-8.978)
C3': (94.149,116.151,-8.143)
C1': (93.668,115.292,-5.987)
C5': (92.803,114.220,-9.106)
O6: (94.773,111.730,-1.294)
O4': (92.586,114.926,-6.816)
C8: (94.547,112.993,-5.382)
C2: (93.118,114.858,-1.696)
C6: (94.288,112.707,-1.881)
C5: (94.284,112.988,-3.272)
C4: (93.732,114.172,-3.712)
P: (94.142,112.042,-9.708)
C4': (92.825,115.398,-8.172)
C2': (94.845,115.565,-6.921)
O2': (95.786,116.433,-6.324)
N1: (93.663,113.717,-1.155)
N2: (92.538,115.706,-0.833)
N3: (93.137,115.144,-2.987)
N7: (94.778,112.249,-4.337)
N9: (93.950,114.191,-5.071)
O5': (93.952,113.384,-8.876)
O3': (93.927,117.543,-8.003)
C4: (90.938,118.774,-1.496)
N3: (90.191,119.720,-2.165)
OP1: (90.450,119.430,5.481)
OP2: (89.671,117.503,3.977)
C2: (89.591,120.828,-1.628)
C1': (89.147,122.150,0.391)
C3': (87.398,121.453,1.808)
O5': (89.071,119.864,3.430)
O4': (89.616,122.211,1.731)
C5': (88.920,121.237,3.832)
P: (90.132,118.904,4.130)
C4': (88.499,122.074,2.648)
C2': (87.619,122.093,0.446)
O2': (87.078,123.395,0.371)
N1: (89.767,120.983,-0.260)
O4: (91.402,117.815,-2.117)
O2: (88.953,121.614,-2.311)
C6: (90.501,120.074,0.462)
C5: (91.078,119.010,-0.090)
O3': (86.108,121.711,2.335)
N3: (90.191,119.720,-2.165)
OP1: (90.450,119.430,5.481)
OP2: (89.671,117.503,3.977)
C2: (89.591,120.828,-1.628)
C1': (89.147,122.150,0.391)
C3': (87.398,121.453,1.808)
O5': (89.071,119.864,3.430)
O4': (89.616,122.211,1.731)
C5': (88.920,121.237,3.832)
P: (90.132,118.904,4.130)
C4': (88.499,122.074,2.648)
C2': (87.619,122.093,0.446)
O2': (87.078,123.395,0.371)
N1: (89.767,120.983,-0.260)
O4: (91.402,117.815,-2.117)
O2: (88.953,121.614,-2.311)
C6: (90.501,120.074,0.462)
C5: (91.078,119.010,-0.090)
O3': (86.108,121.711,2.335)
Image (generated by PyMOL):