Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0234:0253
Extra
PDB:
ATOM 1 O3' C A 233 92.815 111.917 -9.533 1.00 64.50 O
ATOM 2 P G A 234 94.294 112.541 -9.564 1.00 66.50 P
ATOM 3 OP1 G A 234 94.614 112.929 -10.971 1.00 67.62 O
ATOM 4 OP2 G A 234 95.193 111.594 -8.838 1.00 62.69 O
ATOM 5 O5' G A 234 94.118 113.871 -8.715 1.00 63.72 O
ATOM 6 C5' G A 234 92.954 114.695 -8.899 1.00 64.64 C
ATOM 7 C4' G A 234 93.014 115.882 -7.980 1.00 66.67 C
ATOM 8 O4' G A 234 92.817 115.433 -6.609 1.00 68.14 O
ATOM 9 C3' G A 234 94.353 116.608 -8.009 1.00 66.88 C
ATOM 10 O3' G A 234 94.162 118.005 -7.854 1.00 67.33 O
ATOM 11 C2' G A 234 95.090 115.997 -6.823 1.00 67.00 C
ATOM 12 O2' G A 234 96.098 116.829 -6.288 1.00 65.88 O
ATOM 13 C1' G A 234 93.947 115.771 -5.833 1.00 68.08 C
ATOM 14 N9 G A 234 94.217 114.680 -4.898 1.00 69.29 N
ATOM 15 C8 G A 234 94.810 113.470 -5.183 1.00 69.61 C
ATOM 16 N7 G A 234 95.015 112.737 -4.123 1.00 70.96 N
ATOM 17 C5 G A 234 94.510 113.497 -3.074 1.00 71.24 C
ATOM 18 C6 G A 234 94.481 113.236 -1.676 1.00 70.76 C
ATOM 19 O6 G A 234 94.933 112.262 -1.065 1.00 69.70 O
ATOM 20 N1 G A 234 93.859 114.265 -0.977 1.00 70.79 N
ATOM 21 C2 G A 234 93.339 115.403 -1.542 1.00 70.60 C
ATOM 22 N2 G A 234 92.756 116.268 -0.696 1.00 70.40 N
ATOM 23 N3 G A 234 93.382 115.672 -2.838 1.00 70.42 N
ATOM 24 C4 G A 234 93.979 114.683 -3.540 1.00 70.11 C
ATOM 25 P A A 235 94.751 119.007 -8.961 1.00 65.19 P
ATOM 26 OP1 A A 235 94.353 118.484 -10.293 1.00 66.10 O
ATOM 27 OP2 A A 235 96.196 119.209 -8.652 1.00 62.56 O
ATOM 28 O5' A A 235 93.948 120.356 -8.707 1.00 62.29 O
TER
ATOM 1 O3' G B 252 91.599 119.667 3.431 1.00 53.30 O
ATOM 2 P U B 253 90.299 119.504 4.355 1.00 52.50 P
ATOM 3 OP1 U B 253 90.641 120.091 5.671 1.00 52.75 O
ATOM 4 OP2 U B 253 89.851 118.089 4.277 1.00 52.02 O
ATOM 5 O5' U B 253 89.204 120.422 3.654 1.00 52.01 O
ATOM 6 C5' U B 253 89.022 121.796 4.048 1.00 52.18 C
ATOM 7 C4' U B 253 88.583 122.618 2.863 1.00 53.24 C
ATOM 8 O4' U B 253 89.697 122.805 1.948 1.00 53.08 O
ATOM 9 C3' U B 253 87.512 121.955 2.021 1.00 53.64 C
ATOM 10 O3' U B 253 86.217 122.155 2.570 1.00 53.14 O
ATOM 11 C2' U B 253 87.709 122.609 0.660 1.00 52.56 C
ATOM 12 O2' U B 253 87.121 123.893 0.575 1.00 53.87 O
ATOM 13 C1' U B 253 89.235 122.728 0.609 1.00 51.60 C
ATOM 14 N1 U B 253 89.896 121.581 -0.034 1.00 51.63 N
ATOM 15 C2 U B 253 89.706 121.393 -1.398 1.00 51.64 C
ATOM 16 O2 U B 253 89.032 122.146 -2.090 1.00 53.20 O
ATOM 17 N3 U B 253 90.338 120.294 -1.923 1.00 50.02 N
ATOM 18 C4 U B 253 91.128 119.387 -1.248 1.00 51.49 C
ATOM 19 O4 U B 253 91.609 118.432 -1.859 1.00 52.35 O
ATOM 20 C5 U B 253 91.288 119.655 0.151 1.00 51.12 C
ATOM 21 C6 U B 253 90.683 120.712 0.696 1.00 50.13 C
ATOM 22 P G B 254 85.149 120.962 2.523 1.00 54.13 P
ATOM 23 OP1 G B 254 83.828 121.535 2.913 1.00 53.15 O
ATOM 24 OP2 G B 254 85.708 119.806 3.275 1.00 53.58 O
ATOM 25 O5' G B 254 85.081 120.550 0.984 1.00 55.41 O
TER
ATOM 2 P G A 234 94.294 112.541 -9.564 1.00 66.50 P
ATOM 3 OP1 G A 234 94.614 112.929 -10.971 1.00 67.62 O
ATOM 4 OP2 G A 234 95.193 111.594 -8.838 1.00 62.69 O
ATOM 5 O5' G A 234 94.118 113.871 -8.715 1.00 63.72 O
ATOM 6 C5' G A 234 92.954 114.695 -8.899 1.00 64.64 C
ATOM 7 C4' G A 234 93.014 115.882 -7.980 1.00 66.67 C
ATOM 8 O4' G A 234 92.817 115.433 -6.609 1.00 68.14 O
ATOM 9 C3' G A 234 94.353 116.608 -8.009 1.00 66.88 C
ATOM 10 O3' G A 234 94.162 118.005 -7.854 1.00 67.33 O
ATOM 11 C2' G A 234 95.090 115.997 -6.823 1.00 67.00 C
ATOM 12 O2' G A 234 96.098 116.829 -6.288 1.00 65.88 O
ATOM 13 C1' G A 234 93.947 115.771 -5.833 1.00 68.08 C
ATOM 14 N9 G A 234 94.217 114.680 -4.898 1.00 69.29 N
ATOM 15 C8 G A 234 94.810 113.470 -5.183 1.00 69.61 C
ATOM 16 N7 G A 234 95.015 112.737 -4.123 1.00 70.96 N
ATOM 17 C5 G A 234 94.510 113.497 -3.074 1.00 71.24 C
ATOM 18 C6 G A 234 94.481 113.236 -1.676 1.00 70.76 C
ATOM 19 O6 G A 234 94.933 112.262 -1.065 1.00 69.70 O
ATOM 20 N1 G A 234 93.859 114.265 -0.977 1.00 70.79 N
ATOM 21 C2 G A 234 93.339 115.403 -1.542 1.00 70.60 C
ATOM 22 N2 G A 234 92.756 116.268 -0.696 1.00 70.40 N
ATOM 23 N3 G A 234 93.382 115.672 -2.838 1.00 70.42 N
ATOM 24 C4 G A 234 93.979 114.683 -3.540 1.00 70.11 C
ATOM 25 P A A 235 94.751 119.007 -8.961 1.00 65.19 P
ATOM 26 OP1 A A 235 94.353 118.484 -10.293 1.00 66.10 O
ATOM 27 OP2 A A 235 96.196 119.209 -8.652 1.00 62.56 O
ATOM 28 O5' A A 235 93.948 120.356 -8.707 1.00 62.29 O
TER
ATOM 1 O3' G B 252 91.599 119.667 3.431 1.00 53.30 O
ATOM 2 P U B 253 90.299 119.504 4.355 1.00 52.50 P
ATOM 3 OP1 U B 253 90.641 120.091 5.671 1.00 52.75 O
ATOM 4 OP2 U B 253 89.851 118.089 4.277 1.00 52.02 O
ATOM 5 O5' U B 253 89.204 120.422 3.654 1.00 52.01 O
ATOM 6 C5' U B 253 89.022 121.796 4.048 1.00 52.18 C
ATOM 7 C4' U B 253 88.583 122.618 2.863 1.00 53.24 C
ATOM 8 O4' U B 253 89.697 122.805 1.948 1.00 53.08 O
ATOM 9 C3' U B 253 87.512 121.955 2.021 1.00 53.64 C
ATOM 10 O3' U B 253 86.217 122.155 2.570 1.00 53.14 O
ATOM 11 C2' U B 253 87.709 122.609 0.660 1.00 52.56 C
ATOM 12 O2' U B 253 87.121 123.893 0.575 1.00 53.87 O
ATOM 13 C1' U B 253 89.235 122.728 0.609 1.00 51.60 C
ATOM 14 N1 U B 253 89.896 121.581 -0.034 1.00 51.63 N
ATOM 15 C2 U B 253 89.706 121.393 -1.398 1.00 51.64 C
ATOM 16 O2 U B 253 89.032 122.146 -2.090 1.00 53.20 O
ATOM 17 N3 U B 253 90.338 120.294 -1.923 1.00 50.02 N
ATOM 18 C4 U B 253 91.128 119.387 -1.248 1.00 51.49 C
ATOM 19 O4 U B 253 91.609 118.432 -1.859 1.00 52.35 O
ATOM 20 C5 U B 253 91.288 119.655 0.151 1.00 51.12 C
ATOM 21 C6 U B 253 90.683 120.712 0.696 1.00 50.13 C
ATOM 22 P G B 254 85.149 120.962 2.523 1.00 54.13 P
ATOM 23 OP1 G B 254 83.828 121.535 2.913 1.00 53.15 O
ATOM 24 OP2 G B 254 85.708 119.806 3.275 1.00 53.58 O
ATOM 25 O5' G B 254 85.081 120.550 0.984 1.00 55.41 O
TER
Atoms:
OP1: (94.614,112.929,-10.971)
OP2: (95.193,111.594,-8.838)
C3': (94.353,116.608,-8.009)
C1': (93.947,115.771,-5.833)
C5': (92.954,114.695,-8.899)
O6: (94.933,112.262,-1.065)
O4': (92.817,115.433,-6.609)
C8: (94.810,113.470,-5.183)
C2: (93.339,115.403,-1.542)
C6: (94.481,113.236,-1.676)
C5: (94.510,113.497,-3.074)
C4: (93.979,114.683,-3.540)
P: (94.294,112.541,-9.564)
C4': (93.014,115.882,-7.980)
C2': (95.090,115.997,-6.823)
O2': (96.098,116.829,-6.288)
N1: (93.859,114.265,-0.977)
N2: (92.756,116.268,-0.696)
N3: (93.382,115.672,-2.838)
N7: (95.015,112.737,-4.123)
N9: (94.217,114.680,-4.898)
O5': (94.118,113.871,-8.715)
O3': (94.162,118.005,-7.854)
OP2: (95.193,111.594,-8.838)
C3': (94.353,116.608,-8.009)
C1': (93.947,115.771,-5.833)
C5': (92.954,114.695,-8.899)
O6: (94.933,112.262,-1.065)
O4': (92.817,115.433,-6.609)
C8: (94.810,113.470,-5.183)
C2: (93.339,115.403,-1.542)
C6: (94.481,113.236,-1.676)
C5: (94.510,113.497,-3.074)
C4: (93.979,114.683,-3.540)
P: (94.294,112.541,-9.564)
C4': (93.014,115.882,-7.980)
C2': (95.090,115.997,-6.823)
O2': (96.098,116.829,-6.288)
N1: (93.859,114.265,-0.977)
N2: (92.756,116.268,-0.696)
N3: (93.382,115.672,-2.838)
N7: (95.015,112.737,-4.123)
N9: (94.217,114.680,-4.898)
O5': (94.118,113.871,-8.715)
O3': (94.162,118.005,-7.854)
C4: (91.128,119.387,-1.248)
N3: (90.338,120.294,-1.923)
OP1: (90.641,120.091,5.671)
OP2: (89.851,118.089,4.277)
C2: (89.706,121.393,-1.398)
C1': (89.235,122.728,0.609)
C3': (87.512,121.955,2.021)
O5': (89.204,120.422,3.654)
O4': (89.697,122.805,1.948)
C5': (89.022,121.796,4.048)
P: (90.299,119.504,4.355)
C4': (88.583,122.618,2.863)
C2': (87.709,122.609,0.660)
O2': (87.121,123.893,0.575)
N1: (89.896,121.581,-0.034)
O4: (91.609,118.432,-1.859)
O2: (89.032,122.146,-2.090)
C6: (90.683,120.712,0.696)
C5: (91.288,119.655,0.151)
O3': (86.217,122.155,2.570)
N3: (90.338,120.294,-1.923)
OP1: (90.641,120.091,5.671)
OP2: (89.851,118.089,4.277)
C2: (89.706,121.393,-1.398)
C1': (89.235,122.728,0.609)
C3': (87.512,121.955,2.021)
O5': (89.204,120.422,3.654)
O4': (89.697,122.805,1.948)
C5': (89.022,121.796,4.048)
P: (90.299,119.504,4.355)
C4': (88.583,122.618,2.863)
C2': (87.709,122.609,0.660)
O2': (87.121,123.893,0.575)
N1: (89.896,121.581,-0.034)
O4: (91.609,118.432,-1.859)
O2: (89.032,122.146,-2.090)
C6: (90.683,120.712,0.696)
C5: (91.288,119.655,0.151)
O3': (86.217,122.155,2.570)
Image (generated by PyMOL):