Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0519:02
Extra
PDB:
ATOM 1 O3' C A 518 17.103 136.472 103.495 1.00 49.90 O
ATOM 2 P G A 519 16.855 137.538 104.673 1.00 50.56 P
ATOM 3 OP1 G A 519 16.628 136.778 105.920 1.00 51.47 O
ATOM 4 OP2 G A 519 15.849 138.530 104.219 1.00 49.93 O
ATOM 5 O5' G A 519 18.246 138.290 104.828 1.00 50.68 O
ATOM 6 C5' G A 519 19.450 137.572 105.142 1.00 49.49 C
ATOM 7 C4' G A 519 20.639 138.471 104.938 1.00 49.15 C
ATOM 8 O4' G A 519 20.643 138.939 103.562 1.00 50.37 O
ATOM 9 C3' G A 519 20.604 139.746 105.757 1.00 49.15 C
ATOM 10 O3' G A 519 21.103 139.514 107.067 1.00 48.29 O
ATOM 11 C2' G A 519 21.476 140.682 104.935 1.00 51.47 C
ATOM 12 O2' G A 519 22.854 140.419 105.091 1.00 54.67 O
ATOM 13 C1' G A 519 21.074 140.289 103.514 1.00 52.04 C
ATOM 14 N9 G A 519 19.988 141.103 102.975 1.00 54.31 N
ATOM 15 C8 G A 519 18.647 140.799 102.961 1.00 55.37 C
ATOM 16 N7 G A 519 17.918 141.723 102.399 1.00 55.66 N
ATOM 17 C5 G A 519 18.831 142.696 102.022 1.00 56.51 C
ATOM 18 C6 G A 519 18.630 143.929 101.370 1.00 58.13 C
ATOM 19 O6 G A 519 17.570 144.423 100.975 1.00 62.55 O
ATOM 20 N1 G A 519 19.826 144.612 101.182 1.00 57.15 N
ATOM 21 C2 G A 519 21.059 144.159 101.567 1.00 55.71 C
ATOM 22 N2 G A 519 22.094 144.955 101.280 1.00 56.32 N
ATOM 23 N3 G A 519 21.262 143.009 102.181 1.00 55.50 N
ATOM 24 C4 G A 519 20.112 142.332 102.375 1.00 55.36 C
ATOM 25 P A A 520 20.837 140.590 108.231 1.00 48.08 P
ATOM 26 OP1 A A 520 20.566 139.828 109.476 1.00 47.60 O
ATOM 27 OP2 A A 520 19.836 141.556 107.740 1.00 48.86 O
ATOM 28 O5' A A 520 22.238 141.330 108.385 1.00 45.70 O
TER
ATOM 1 O3' A B 1 26.178 150.877 100.795 1.00 61.13 O
ATOM 2 P U B 2 26.290 150.242 99.325 1.00 62.43 P
ATOM 3 OP1 U B 2 26.636 151.357 98.412 1.00 62.70 O
ATOM 4 OP2 U B 2 25.091 149.415 99.040 1.00 62.22 O
ATOM 5 O5' U B 2 27.547 149.265 99.432 1.00 62.15 O
ATOM 6 C5' U B 2 28.854 149.779 99.763 1.00 59.54 C
ATOM 7 C4' U B 2 29.742 148.681 100.302 1.00 57.40 C
ATOM 8 O4' U B 2 29.230 148.202 101.576 1.00 56.30 O
ATOM 9 C3' U B 2 29.836 147.420 99.465 1.00 57.30 C
ATOM 10 O3' U B 2 30.713 147.538 98.357 1.00 56.15 O
ATOM 11 C2' U B 2 30.344 146.413 100.484 1.00 57.58 C
ATOM 12 O2' U B 2 31.734 146.531 100.732 1.00 59.83 O
ATOM 13 C1' U B 2 29.540 146.822 101.720 1.00 56.46 C
ATOM 14 N1 U B 2 28.285 146.056 101.821 1.00 56.07 N
ATOM 15 C2 U B 2 28.365 144.742 102.272 1.00 56.73 C
ATOM 16 O2 U B 2 29.411 144.212 102.616 1.00 56.95 O
ATOM 17 N3 U B 2 27.170 144.070 102.309 1.00 56.76 N
ATOM 18 C4 U B 2 25.934 144.554 101.962 1.00 56.06 C
ATOM 19 O4 U B 2 24.959 143.804 102.017 1.00 56.53 O
ATOM 20 C5 U B 2 25.927 145.919 101.527 1.00 55.51 C
ATOM 21 C6 U B 2 27.072 146.605 101.472 1.00 55.08 C
ATOM 22 P G B 3 30.225 147.043 96.905 1.00 57.30 P
ATOM 23 OP1 G B 3 31.466 146.821 96.103 1.00 55.95 O
ATOM 24 OP2 G B 3 29.200 148.018 96.424 1.00 57.61 O
ATOM 25 O5' G B 3 29.514 145.633 97.169 1.00 51.89 O
TER
ATOM 2 P G A 519 16.855 137.538 104.673 1.00 50.56 P
ATOM 3 OP1 G A 519 16.628 136.778 105.920 1.00 51.47 O
ATOM 4 OP2 G A 519 15.849 138.530 104.219 1.00 49.93 O
ATOM 5 O5' G A 519 18.246 138.290 104.828 1.00 50.68 O
ATOM 6 C5' G A 519 19.450 137.572 105.142 1.00 49.49 C
ATOM 7 C4' G A 519 20.639 138.471 104.938 1.00 49.15 C
ATOM 8 O4' G A 519 20.643 138.939 103.562 1.00 50.37 O
ATOM 9 C3' G A 519 20.604 139.746 105.757 1.00 49.15 C
ATOM 10 O3' G A 519 21.103 139.514 107.067 1.00 48.29 O
ATOM 11 C2' G A 519 21.476 140.682 104.935 1.00 51.47 C
ATOM 12 O2' G A 519 22.854 140.419 105.091 1.00 54.67 O
ATOM 13 C1' G A 519 21.074 140.289 103.514 1.00 52.04 C
ATOM 14 N9 G A 519 19.988 141.103 102.975 1.00 54.31 N
ATOM 15 C8 G A 519 18.647 140.799 102.961 1.00 55.37 C
ATOM 16 N7 G A 519 17.918 141.723 102.399 1.00 55.66 N
ATOM 17 C5 G A 519 18.831 142.696 102.022 1.00 56.51 C
ATOM 18 C6 G A 519 18.630 143.929 101.370 1.00 58.13 C
ATOM 19 O6 G A 519 17.570 144.423 100.975 1.00 62.55 O
ATOM 20 N1 G A 519 19.826 144.612 101.182 1.00 57.15 N
ATOM 21 C2 G A 519 21.059 144.159 101.567 1.00 55.71 C
ATOM 22 N2 G A 519 22.094 144.955 101.280 1.00 56.32 N
ATOM 23 N3 G A 519 21.262 143.009 102.181 1.00 55.50 N
ATOM 24 C4 G A 519 20.112 142.332 102.375 1.00 55.36 C
ATOM 25 P A A 520 20.837 140.590 108.231 1.00 48.08 P
ATOM 26 OP1 A A 520 20.566 139.828 109.476 1.00 47.60 O
ATOM 27 OP2 A A 520 19.836 141.556 107.740 1.00 48.86 O
ATOM 28 O5' A A 520 22.238 141.330 108.385 1.00 45.70 O
TER
ATOM 1 O3' A B 1 26.178 150.877 100.795 1.00 61.13 O
ATOM 2 P U B 2 26.290 150.242 99.325 1.00 62.43 P
ATOM 3 OP1 U B 2 26.636 151.357 98.412 1.00 62.70 O
ATOM 4 OP2 U B 2 25.091 149.415 99.040 1.00 62.22 O
ATOM 5 O5' U B 2 27.547 149.265 99.432 1.00 62.15 O
ATOM 6 C5' U B 2 28.854 149.779 99.763 1.00 59.54 C
ATOM 7 C4' U B 2 29.742 148.681 100.302 1.00 57.40 C
ATOM 8 O4' U B 2 29.230 148.202 101.576 1.00 56.30 O
ATOM 9 C3' U B 2 29.836 147.420 99.465 1.00 57.30 C
ATOM 10 O3' U B 2 30.713 147.538 98.357 1.00 56.15 O
ATOM 11 C2' U B 2 30.344 146.413 100.484 1.00 57.58 C
ATOM 12 O2' U B 2 31.734 146.531 100.732 1.00 59.83 O
ATOM 13 C1' U B 2 29.540 146.822 101.720 1.00 56.46 C
ATOM 14 N1 U B 2 28.285 146.056 101.821 1.00 56.07 N
ATOM 15 C2 U B 2 28.365 144.742 102.272 1.00 56.73 C
ATOM 16 O2 U B 2 29.411 144.212 102.616 1.00 56.95 O
ATOM 17 N3 U B 2 27.170 144.070 102.309 1.00 56.76 N
ATOM 18 C4 U B 2 25.934 144.554 101.962 1.00 56.06 C
ATOM 19 O4 U B 2 24.959 143.804 102.017 1.00 56.53 O
ATOM 20 C5 U B 2 25.927 145.919 101.527 1.00 55.51 C
ATOM 21 C6 U B 2 27.072 146.605 101.472 1.00 55.08 C
ATOM 22 P G B 3 30.225 147.043 96.905 1.00 57.30 P
ATOM 23 OP1 G B 3 31.466 146.821 96.103 1.00 55.95 O
ATOM 24 OP2 G B 3 29.200 148.018 96.424 1.00 57.61 O
ATOM 25 O5' G B 3 29.514 145.633 97.169 1.00 51.89 O
TER
Atoms:
OP1: (16.628,136.778,105.920)
OP2: (15.849,138.530,104.219)
C3': (20.604,139.746,105.757)
C1': (21.074,140.289,103.514)
C5': (19.450,137.572,105.142)
O6: (17.570,144.423,100.975)
O4': (20.643,138.939,103.562)
C8: (18.647,140.799,102.961)
C2: (21.059,144.159,101.567)
C6: (18.630,143.929,101.370)
C5: (18.831,142.696,102.022)
C4: (20.112,142.332,102.375)
P: (16.855,137.538,104.673)
C4': (20.639,138.471,104.938)
C2': (21.476,140.682,104.935)
O2': (22.854,140.419,105.091)
N1: (19.826,144.612,101.182)
N2: (22.094,144.955,101.280)
N3: (21.262,143.009,102.181)
N7: (17.918,141.723,102.399)
N9: (19.988,141.103,102.975)
O5': (18.246,138.290,104.828)
O3': (21.103,139.514,107.067)
OP2: (15.849,138.530,104.219)
C3': (20.604,139.746,105.757)
C1': (21.074,140.289,103.514)
C5': (19.450,137.572,105.142)
O6: (17.570,144.423,100.975)
O4': (20.643,138.939,103.562)
C8: (18.647,140.799,102.961)
C2: (21.059,144.159,101.567)
C6: (18.630,143.929,101.370)
C5: (18.831,142.696,102.022)
C4: (20.112,142.332,102.375)
P: (16.855,137.538,104.673)
C4': (20.639,138.471,104.938)
C2': (21.476,140.682,104.935)
O2': (22.854,140.419,105.091)
N1: (19.826,144.612,101.182)
N2: (22.094,144.955,101.280)
N3: (21.262,143.009,102.181)
N7: (17.918,141.723,102.399)
N9: (19.988,141.103,102.975)
O5': (18.246,138.290,104.828)
O3': (21.103,139.514,107.067)
C4: (25.934,144.554,101.962)
N3: (27.170,144.070,102.309)
OP1: (26.636,151.357,98.412)
OP2: (25.091,149.415,99.040)
C2: (28.365,144.742,102.272)
C1': (29.540,146.822,101.720)
C3': (29.836,147.420,99.465)
O5': (27.547,149.265,99.432)
O4': (29.230,148.202,101.576)
C5': (28.854,149.779,99.763)
P: (26.290,150.242,99.325)
C4': (29.742,148.681,100.302)
C2': (30.344,146.413,100.484)
O2': (31.734,146.531,100.732)
N1: (28.285,146.056,101.821)
O4: (24.959,143.804,102.017)
O2: (29.411,144.212,102.616)
C6: (27.072,146.605,101.472)
C5: (25.927,145.919,101.527)
O3': (30.713,147.538,98.357)
N3: (27.170,144.070,102.309)
OP1: (26.636,151.357,98.412)
OP2: (25.091,149.415,99.040)
C2: (28.365,144.742,102.272)
C1': (29.540,146.822,101.720)
C3': (29.836,147.420,99.465)
O5': (27.547,149.265,99.432)
O4': (29.230,148.202,101.576)
C5': (28.854,149.779,99.763)
P: (26.290,150.242,99.325)
C4': (29.742,148.681,100.302)
C2': (30.344,146.413,100.484)
O2': (31.734,146.531,100.732)
N1: (28.285,146.056,101.821)
O4: (24.959,143.804,102.017)
O2: (29.411,144.212,102.616)
C6: (27.072,146.605,101.472)
C5: (25.927,145.919,101.527)
O3': (30.713,147.538,98.357)
Image (generated by PyMOL):