Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A1608:A1909
Extra
PDB:
ATOM 1 O3' G A1607 -9.597 79.212 153.755 1.00 10.65 O
ATOM 2 P G A1608 -9.361 80.138 152.474 1.00 14.27 P
ATOM 3 OP1 G A1608 -9.833 79.390 151.282 1.00 16.47 O
ATOM 4 OP2 G A1608 -7.982 80.682 152.496 1.00 16.47 O
ATOM 5 O5' G A1608 -10.429 81.274 152.751 1.00 12.80 O
ATOM 6 C5' G A1608 -10.578 82.335 151.849 1.00 12.80 C
ATOM 7 C4' G A1608 -10.674 83.640 152.589 1.00 12.80 C
ATOM 8 O4' G A1608 -9.888 83.639 153.819 1.00 12.80 O
ATOM 9 C3' G A1608 -10.104 84.735 151.719 1.00 12.80 C
ATOM 10 O3' G A1608 -10.846 85.893 151.982 1.00 12.80 O
ATOM 11 C2' G A1608 -8.680 84.851 152.233 1.00 12.80 C
ATOM 12 O2' G A1608 -8.061 86.074 151.952 1.00 12.80 O
ATOM 13 C1' G A1608 -8.891 84.633 153.728 1.00 12.80 C
ATOM 14 N9 G A1608 -7.698 84.209 154.458 1.00 45.51 N
ATOM 15 C8 G A1608 -7.040 83.003 154.385 1.00 45.51 C
ATOM 16 N7 G A1608 -5.995 82.942 155.166 1.00 45.51 N
ATOM 17 C5 G A1608 -5.966 84.178 155.796 1.00 45.51 C
ATOM 18 C6 G A1608 -5.072 84.694 156.760 1.00 45.51 C
ATOM 19 O6 G A1608 -4.103 84.136 157.284 1.00 45.51 O
ATOM 20 N1 G A1608 -5.396 85.998 157.116 1.00 45.51 N
ATOM 21 C2 G A1608 -6.448 86.714 156.617 1.00 45.51 C
ATOM 22 N2 G A1608 -6.578 87.967 157.069 1.00 45.51 N
ATOM 23 N3 G A1608 -7.304 86.239 155.733 1.00 45.51 N
ATOM 24 C4 G A1608 -7.004 84.973 155.367 1.00 45.51 C
ATOM 25 P A A1609 -11.719 86.542 150.818 1.00 12.67 P
ATOM 26 OP1 A A1609 -12.806 85.583 150.451 1.00 35.67 O
ATOM 27 OP2 A A1609 -10.759 87.005 149.778 1.00 35.67 O
ATOM 28 O5' A A1609 -12.363 87.820 151.516 1.00 3.03 O
TER
ATOM 1 O3' G B1908 -4.181 93.126 160.599 1.00 26.59 O
ATOM 2 P U B1909 -4.896 94.463 161.150 1.00 20.14 P
ATOM 3 OP1 U B1909 -4.335 95.567 160.334 1.00 20.14 O
ATOM 4 OP2 U B1909 -4.816 94.544 162.627 1.00 20.14 O
ATOM 5 O5' U B1909 -6.427 94.381 160.764 1.00 4.63 O
ATOM 6 C5' U B1909 -7.210 95.525 161.012 1.00 4.63 C
ATOM 7 C4' U B1909 -8.625 95.345 160.564 1.00 4.63 C
ATOM 8 O4' U B1909 -8.691 95.066 159.152 1.00 4.63 O
ATOM 9 C3' U B1909 -9.477 94.275 161.195 1.00 4.63 C
ATOM 10 O3' U B1909 -9.991 94.717 162.426 1.00 4.63 O
ATOM 11 C2' U B1909 -10.619 94.195 160.199 1.00 4.63 C
ATOM 12 O2' U B1909 -11.533 95.259 160.375 1.00 4.63 O
ATOM 13 C1' U B1909 -9.894 94.385 158.869 1.00 4.63 C
ATOM 14 N1 U B1909 -9.566 93.085 158.267 1.00 15.57 N
ATOM 15 C2 U B1909 -10.605 92.321 157.807 1.00 15.57 C
ATOM 16 O2 U B1909 -11.768 92.691 157.842 1.00 15.57 O
ATOM 17 N3 U B1909 -10.244 91.105 157.308 1.00 15.57 N
ATOM 18 C4 U B1909 -8.973 90.587 157.219 1.00 15.57 C
ATOM 19 O4 U B1909 -8.815 89.422 156.849 1.00 15.57 O
ATOM 20 C5 U B1909 -7.953 91.450 157.686 1.00 15.57 C
ATOM 21 C6 U B1909 -8.276 92.639 158.183 1.00 15.57 C
ATOM 22 P C B1910 -10.646 93.661 163.434 1.00 3.18 P
ATOM 23 OP1 C B1910 -11.598 94.350 164.366 1.00 3.76 O
ATOM 24 OP2 C B1910 -9.490 92.890 163.985 1.00 3.76 O
ATOM 25 O5' C B1910 -11.511 92.737 162.481 1.00 3.90 O
TER
ATOM 2 P G A1608 -9.361 80.138 152.474 1.00 14.27 P
ATOM 3 OP1 G A1608 -9.833 79.390 151.282 1.00 16.47 O
ATOM 4 OP2 G A1608 -7.982 80.682 152.496 1.00 16.47 O
ATOM 5 O5' G A1608 -10.429 81.274 152.751 1.00 12.80 O
ATOM 6 C5' G A1608 -10.578 82.335 151.849 1.00 12.80 C
ATOM 7 C4' G A1608 -10.674 83.640 152.589 1.00 12.80 C
ATOM 8 O4' G A1608 -9.888 83.639 153.819 1.00 12.80 O
ATOM 9 C3' G A1608 -10.104 84.735 151.719 1.00 12.80 C
ATOM 10 O3' G A1608 -10.846 85.893 151.982 1.00 12.80 O
ATOM 11 C2' G A1608 -8.680 84.851 152.233 1.00 12.80 C
ATOM 12 O2' G A1608 -8.061 86.074 151.952 1.00 12.80 O
ATOM 13 C1' G A1608 -8.891 84.633 153.728 1.00 12.80 C
ATOM 14 N9 G A1608 -7.698 84.209 154.458 1.00 45.51 N
ATOM 15 C8 G A1608 -7.040 83.003 154.385 1.00 45.51 C
ATOM 16 N7 G A1608 -5.995 82.942 155.166 1.00 45.51 N
ATOM 17 C5 G A1608 -5.966 84.178 155.796 1.00 45.51 C
ATOM 18 C6 G A1608 -5.072 84.694 156.760 1.00 45.51 C
ATOM 19 O6 G A1608 -4.103 84.136 157.284 1.00 45.51 O
ATOM 20 N1 G A1608 -5.396 85.998 157.116 1.00 45.51 N
ATOM 21 C2 G A1608 -6.448 86.714 156.617 1.00 45.51 C
ATOM 22 N2 G A1608 -6.578 87.967 157.069 1.00 45.51 N
ATOM 23 N3 G A1608 -7.304 86.239 155.733 1.00 45.51 N
ATOM 24 C4 G A1608 -7.004 84.973 155.367 1.00 45.51 C
ATOM 25 P A A1609 -11.719 86.542 150.818 1.00 12.67 P
ATOM 26 OP1 A A1609 -12.806 85.583 150.451 1.00 35.67 O
ATOM 27 OP2 A A1609 -10.759 87.005 149.778 1.00 35.67 O
ATOM 28 O5' A A1609 -12.363 87.820 151.516 1.00 3.03 O
TER
ATOM 1 O3' G B1908 -4.181 93.126 160.599 1.00 26.59 O
ATOM 2 P U B1909 -4.896 94.463 161.150 1.00 20.14 P
ATOM 3 OP1 U B1909 -4.335 95.567 160.334 1.00 20.14 O
ATOM 4 OP2 U B1909 -4.816 94.544 162.627 1.00 20.14 O
ATOM 5 O5' U B1909 -6.427 94.381 160.764 1.00 4.63 O
ATOM 6 C5' U B1909 -7.210 95.525 161.012 1.00 4.63 C
ATOM 7 C4' U B1909 -8.625 95.345 160.564 1.00 4.63 C
ATOM 8 O4' U B1909 -8.691 95.066 159.152 1.00 4.63 O
ATOM 9 C3' U B1909 -9.477 94.275 161.195 1.00 4.63 C
ATOM 10 O3' U B1909 -9.991 94.717 162.426 1.00 4.63 O
ATOM 11 C2' U B1909 -10.619 94.195 160.199 1.00 4.63 C
ATOM 12 O2' U B1909 -11.533 95.259 160.375 1.00 4.63 O
ATOM 13 C1' U B1909 -9.894 94.385 158.869 1.00 4.63 C
ATOM 14 N1 U B1909 -9.566 93.085 158.267 1.00 15.57 N
ATOM 15 C2 U B1909 -10.605 92.321 157.807 1.00 15.57 C
ATOM 16 O2 U B1909 -11.768 92.691 157.842 1.00 15.57 O
ATOM 17 N3 U B1909 -10.244 91.105 157.308 1.00 15.57 N
ATOM 18 C4 U B1909 -8.973 90.587 157.219 1.00 15.57 C
ATOM 19 O4 U B1909 -8.815 89.422 156.849 1.00 15.57 O
ATOM 20 C5 U B1909 -7.953 91.450 157.686 1.00 15.57 C
ATOM 21 C6 U B1909 -8.276 92.639 158.183 1.00 15.57 C
ATOM 22 P C B1910 -10.646 93.661 163.434 1.00 3.18 P
ATOM 23 OP1 C B1910 -11.598 94.350 164.366 1.00 3.76 O
ATOM 24 OP2 C B1910 -9.490 92.890 163.985 1.00 3.76 O
ATOM 25 O5' C B1910 -11.511 92.737 162.481 1.00 3.90 O
TER
Atoms:
OP1: (-9.833,79.390,151.282)
OP2: (-7.982,80.682,152.496)
C3': (-10.104,84.735,151.719)
C1': (-8.891,84.633,153.728)
C5': (-10.578,82.335,151.849)
O6: (-4.103,84.136,157.284)
O4': (-9.888,83.639,153.819)
C8: (-7.040,83.003,154.385)
C2: (-6.448,86.714,156.617)
C6: (-5.072,84.694,156.760)
C5: (-5.966,84.178,155.796)
C4: (-7.004,84.973,155.367)
P: (-9.361,80.138,152.474)
C4': (-10.674,83.640,152.589)
C2': (-8.680,84.851,152.233)
O2': (-8.061,86.074,151.952)
N1: (-5.396,85.998,157.116)
N2: (-6.578,87.967,157.069)
N3: (-7.304,86.239,155.733)
N7: (-5.995,82.942,155.166)
N9: (-7.698,84.209,154.458)
O5': (-10.429,81.274,152.751)
O3': (-10.846,85.893,151.982)
OP2: (-7.982,80.682,152.496)
C3': (-10.104,84.735,151.719)
C1': (-8.891,84.633,153.728)
C5': (-10.578,82.335,151.849)
O6: (-4.103,84.136,157.284)
O4': (-9.888,83.639,153.819)
C8: (-7.040,83.003,154.385)
C2: (-6.448,86.714,156.617)
C6: (-5.072,84.694,156.760)
C5: (-5.966,84.178,155.796)
C4: (-7.004,84.973,155.367)
P: (-9.361,80.138,152.474)
C4': (-10.674,83.640,152.589)
C2': (-8.680,84.851,152.233)
O2': (-8.061,86.074,151.952)
N1: (-5.396,85.998,157.116)
N2: (-6.578,87.967,157.069)
N3: (-7.304,86.239,155.733)
N7: (-5.995,82.942,155.166)
N9: (-7.698,84.209,154.458)
O5': (-10.429,81.274,152.751)
O3': (-10.846,85.893,151.982)
C4: (-8.973,90.587,157.219)
N3: (-10.244,91.105,157.308)
OP1: (-4.335,95.567,160.334)
OP2: (-4.816,94.544,162.627)
C2: (-10.605,92.321,157.807)
C1': (-9.894,94.385,158.869)
C3': (-9.477,94.275,161.195)
O5': (-6.427,94.381,160.764)
O4': (-8.691,95.066,159.152)
C5': (-7.210,95.525,161.012)
P: (-4.896,94.463,161.150)
C4': (-8.625,95.345,160.564)
C2': (-10.619,94.195,160.199)
O2': (-11.533,95.259,160.375)
N1: (-9.566,93.085,158.267)
O4: (-8.815,89.422,156.849)
O2: (-11.768,92.691,157.842)
C6: (-8.276,92.639,158.183)
C5: (-7.953,91.450,157.686)
O3': (-9.991,94.717,162.426)
N3: (-10.244,91.105,157.308)
OP1: (-4.335,95.567,160.334)
OP2: (-4.816,94.544,162.627)
C2: (-10.605,92.321,157.807)
C1': (-9.894,94.385,158.869)
C3': (-9.477,94.275,161.195)
O5': (-6.427,94.381,160.764)
O4': (-8.691,95.066,159.152)
C5': (-7.210,95.525,161.012)
P: (-4.896,94.463,161.150)
C4': (-8.625,95.345,160.564)
C2': (-10.619,94.195,160.199)
O2': (-11.533,95.259,160.375)
N1: (-9.566,93.085,158.267)
O4: (-8.815,89.422,156.849)
O2: (-11.768,92.691,157.842)
C6: (-8.276,92.639,158.183)
C5: (-7.953,91.450,157.686)
O3': (-9.991,94.717,162.426)
Image (generated by PyMOL):