ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQF:A663:A683

Extra

PDB:
ATOM 1 O3' A A 662 218.010 111.416 -79.479 1.00 82.05 O
ATOM 2 P G A 663 219.473 110.861 -79.102 1.00 82.29 P
ATOM 3 OP1 G A 663 220.454 111.914 -79.515 1.00 82.61 O
ATOM 4 OP2 G A 663 219.577 109.479 -79.629 1.00 83.41 O
ATOM 5 O5' G A 663 219.475 110.770 -77.523 1.00 81.12 O
ATOM 6 C5' G A 663 219.370 111.950 -76.715 1.00 78.88 C
ATOM 7 C4' G A 663 219.113 111.573 -75.279 1.00 77.03 C
ATOM 8 O4' G A 663 217.852 110.862 -75.183 1.00 75.63 O
ATOM 9 C3' G A 663 220.125 110.637 -74.639 1.00 76.09 C
ATOM 10 O3' G A 663 221.253 111.351 -74.153 1.00 74.42 O
ATOM 11 C2' G A 663 219.315 109.995 -73.516 1.00 76.61 C
ATOM 12 O2' G A 663 219.236 110.785 -72.347 1.00 78.35 O
ATOM 13 C1' G A 663 217.922 109.918 -74.136 1.00 76.09 C
ATOM 14 N9 G A 663 217.634 108.591 -74.665 1.00 76.87 N
ATOM 15 C8 G A 663 217.844 108.124 -75.942 1.00 77.15 C
ATOM 16 N7 G A 663 217.514 106.868 -76.087 1.00 77.55 N
ATOM 17 C5 G A 663 217.056 106.486 -74.832 1.00 77.70 C
ATOM 18 C6 G A 663 216.569 105.236 -74.371 1.00 78.64 C
ATOM 19 O6 G A 663 216.458 104.168 -74.993 1.00 81.04 O
ATOM 20 N1 G A 663 216.190 105.299 -73.036 1.00 79.12 N
ATOM 21 C2 G A 663 216.274 106.412 -72.244 1.00 79.56 C
ATOM 22 N2 G A 663 215.839 106.271 -70.989 1.00 82.01 N
ATOM 23 N3 G A 663 216.743 107.576 -72.651 1.00 78.37 N
ATOM 24 C4 G A 663 217.110 107.541 -73.949 1.00 77.61 C
ATOM 25 P U A 664 222.605 110.561 -73.783 1.00 73.92 P
ATOM 26 OP1 U A 664 223.659 111.619 -73.660 1.00 71.94 O
ATOM 27 OP2 U A 664 222.767 109.402 -74.696 1.00 72.17 O
ATOM 28 O5' U A 664 222.339 109.978 -72.345 1.00 72.78 O
TER

ATOM 1 O3' A B 682 210.794 102.612 -66.960 1.00 74.63 O
ATOM 2 P U B 683 209.962 103.918 -67.399 1.00 74.68 P
ATOM 3 OP1 U B 683 208.524 103.608 -67.129 1.00 73.55 O
ATOM 4 OP2 U B 683 210.401 104.308 -68.755 1.00 74.82 O
ATOM 5 O5' U B 683 210.441 105.050 -66.387 1.00 74.66 O
ATOM 6 C5' U B 683 210.130 104.960 -64.985 1.00 75.14 C
ATOM 7 C4' U B 683 210.804 106.069 -64.211 1.00 74.18 C
ATOM 8 O4' U B 683 212.243 105.932 -64.295 1.00 75.33 O
ATOM 9 C3' U B 683 210.526 107.487 -64.666 1.00 74.03 C
ATOM 10 O3' U B 683 209.308 107.949 -64.128 1.00 73.87 O
ATOM 11 C2' U B 683 211.725 108.241 -64.104 1.00 75.26 C
ATOM 12 O2' U B 683 211.592 108.558 -62.735 1.00 74.59 O
ATOM 13 C1' U B 683 212.848 107.209 -64.244 1.00 76.47 C
ATOM 14 N1 U B 683 213.642 107.415 -65.467 1.00 79.47 N
ATOM 15 C2 U B 683 214.527 108.485 -65.488 1.00 82.00 C
ATOM 16 O2 U B 683 214.741 109.190 -64.517 1.00 84.00 O
ATOM 17 N3 U B 683 215.160 108.695 -66.688 1.00 83.17 N
ATOM 18 C4 U B 683 215.023 107.952 -67.840 1.00 83.20 C
ATOM 19 O4 U B 683 215.554 108.348 -68.884 1.00 84.05 O
ATOM 20 C5 U B 683 214.139 106.831 -67.721 1.00 82.93 C
ATOM 21 C6 U B 683 213.495 106.609 -66.568 1.00 81.07 C
ATOM 22 P A B 684 208.188 108.582 -65.096 1.00 74.45 P
ATOM 23 OP1 A B 684 207.029 108.926 -64.223 1.00 76.27 O
ATOM 24 OP2 A B 684 207.966 107.681 -66.249 1.00 75.17 O
ATOM 25 O5' A B 684 208.831 109.939 -65.600 1.00 72.97 O
TER

Atoms:
OP1: (220.454,111.914,-79.515)
OP2: (219.577,109.479,-79.629)
C3': (220.125,110.637,-74.639)
C1': (217.922,109.918,-74.136)
C5': (219.370,111.950,-76.715)
O6: (216.458,104.168,-74.993)
O4': (217.852,110.862,-75.183)
C8: (217.844,108.124,-75.942)
C2: (216.274,106.412,-72.244)
C6: (216.569,105.236,-74.371)
C5: (217.056,106.486,-74.832)
C4: (217.110,107.541,-73.949)
P: (219.473,110.861,-79.102)
C4': (219.113,111.573,-75.279)
C2': (219.315,109.995,-73.516)
O2': (219.236,110.785,-72.347)
N1: (216.190,105.299,-73.036)
N2: (215.839,106.271,-70.989)
N3: (216.743,107.576,-72.651)
N7: (217.514,106.868,-76.087)
N9: (217.634,108.591,-74.665)
O5': (219.475,110.770,-77.523)
O3': (221.253,111.351,-74.153)
C4: (215.023,107.952,-67.840)
N3: (215.160,108.695,-66.688)
OP1: (208.524,103.608,-67.129)
OP2: (210.401,104.308,-68.755)
C2: (214.527,108.485,-65.488)
C1': (212.848,107.209,-64.244)
C3': (210.526,107.487,-64.666)
O5': (210.441,105.050,-66.387)
O4': (212.243,105.932,-64.295)
C5': (210.130,104.960,-64.985)
P: (209.962,103.918,-67.399)
C4': (210.804,106.069,-64.211)
C2': (211.725,108.241,-64.104)
O2': (211.592,108.558,-62.735)
N1: (213.642,107.415,-65.467)
O4: (215.554,108.348,-68.884)
O2: (214.741,109.190,-64.517)
C6: (213.495,106.609,-66.568)
C5: (214.139,106.831,-67.721)
O3': (209.308,107.949,-64.128)
Image (generated by PyMOL):
PyMOL image
show in jmol