Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CD6:0234:0253
Extra
PDB:
ATOM 1 O3' C A 233 92.424 111.968 -9.411 1.00 65.37 O
ATOM 2 P G A 234 93.902 112.578 -9.441 1.00 66.62 P
ATOM 3 OP1 G A 234 94.213 112.911 -10.858 1.00 67.99 O
ATOM 4 OP2 G A 234 94.794 111.660 -8.689 1.00 64.86 O
ATOM 5 O5' G A 234 93.737 113.929 -8.619 1.00 65.46 O
ATOM 6 C5' G A 234 92.614 114.800 -8.859 1.00 64.24 C
ATOM 7 C4' G A 234 92.673 115.986 -7.931 1.00 64.05 C
ATOM 8 O4' G A 234 92.424 115.540 -6.570 1.00 64.09 O
ATOM 9 C3' G A 234 94.016 116.708 -7.905 1.00 63.60 C
ATOM 10 O3' G A 234 93.814 118.095 -7.708 1.00 64.79 O
ATOM 11 C2' G A 234 94.702 116.091 -6.695 1.00 63.12 C
ATOM 12 O2' G A 234 95.682 116.925 -6.117 1.00 63.37 O
ATOM 13 C1' G A 234 93.521 115.884 -5.751 1.00 63.88 C
ATOM 14 N9 G A 234 93.748 114.803 -4.796 1.00 65.09 N
ATOM 15 C8 G A 234 94.303 113.571 -5.054 1.00 64.86 C
ATOM 16 N7 G A 234 94.457 112.843 -3.983 1.00 65.69 N
ATOM 17 C5 G A 234 93.957 113.634 -2.956 1.00 66.71 C
ATOM 18 C6 G A 234 93.875 113.385 -1.561 1.00 66.96 C
ATOM 19 O6 G A 234 94.244 112.388 -0.932 1.00 66.73 O
ATOM 20 N1 G A 234 93.292 114.451 -0.886 1.00 67.00 N
ATOM 21 C2 G A 234 92.843 115.607 -1.472 1.00 66.58 C
ATOM 22 N2 G A 234 92.304 116.509 -0.643 1.00 66.83 N
ATOM 23 N3 G A 234 92.918 115.857 -2.770 1.00 66.15 N
ATOM 24 C4 G A 234 93.488 114.836 -3.447 1.00 65.95 C
ATOM 25 P A A 235 94.246 119.126 -8.859 1.00 64.86 P
ATOM 26 OP1 A A 235 93.717 118.588 -10.140 1.00 66.68 O
ATOM 27 OP2 A A 235 95.694 119.409 -8.724 1.00 64.12 O
ATOM 28 O5' A A 235 93.421 120.442 -8.519 1.00 63.20 O
TER
ATOM 1 O3' G B 252 91.243 119.642 3.494 1.00 50.13 O
ATOM 2 P U B 253 89.934 119.516 4.414 1.00 50.66 P
ATOM 3 OP1 U B 253 90.276 120.113 5.729 1.00 51.04 O
ATOM 4 OP2 U B 253 89.461 118.114 4.347 1.00 50.71 O
ATOM 5 O5' U B 253 88.849 120.440 3.700 1.00 50.86 O
ATOM 6 C5' U B 253 88.672 121.817 4.084 1.00 50.72 C
ATOM 7 C4' U B 253 88.324 122.648 2.877 1.00 51.56 C
ATOM 8 O4' U B 253 89.470 122.722 1.991 1.00 52.81 O
ATOM 9 C3' U B 253 87.228 122.057 2.015 1.00 52.39 C
ATOM 10 O3' U B 253 85.950 122.389 2.524 1.00 53.98 O
ATOM 11 C2' U B 253 87.502 122.683 0.657 1.00 52.57 C
ATOM 12 O2' U B 253 87.005 124.001 0.558 1.00 53.17 O
ATOM 13 C1' U B 253 89.035 122.705 0.640 1.00 52.32 C
ATOM 14 N1 U B 253 89.647 121.547 -0.036 1.00 51.49 N
ATOM 15 C2 U B 253 89.433 121.401 -1.402 1.00 51.23 C
ATOM 16 O2 U B 253 88.792 122.198 -2.071 1.00 52.46 O
ATOM 17 N3 U B 253 90.000 120.287 -1.958 1.00 49.65 N
ATOM 18 C4 U B 253 90.745 119.328 -1.320 1.00 51.07 C
ATOM 19 O4 U B 253 91.145 118.355 -1.960 1.00 51.63 O
ATOM 20 C5 U B 253 90.943 119.555 0.081 1.00 51.11 C
ATOM 21 C6 U B 253 90.402 120.627 0.660 1.00 50.07 C
ATOM 22 P G B 254 84.828 121.252 2.633 1.00 55.20 P
ATOM 23 OP1 G B 254 83.582 121.901 3.134 1.00 52.77 O
ATOM 24 OP2 G B 254 85.431 120.118 3.382 1.00 53.98 O
ATOM 25 O5' G B 254 84.607 120.775 1.126 1.00 55.45 O
TER
ATOM 2 P G A 234 93.902 112.578 -9.441 1.00 66.62 P
ATOM 3 OP1 G A 234 94.213 112.911 -10.858 1.00 67.99 O
ATOM 4 OP2 G A 234 94.794 111.660 -8.689 1.00 64.86 O
ATOM 5 O5' G A 234 93.737 113.929 -8.619 1.00 65.46 O
ATOM 6 C5' G A 234 92.614 114.800 -8.859 1.00 64.24 C
ATOM 7 C4' G A 234 92.673 115.986 -7.931 1.00 64.05 C
ATOM 8 O4' G A 234 92.424 115.540 -6.570 1.00 64.09 O
ATOM 9 C3' G A 234 94.016 116.708 -7.905 1.00 63.60 C
ATOM 10 O3' G A 234 93.814 118.095 -7.708 1.00 64.79 O
ATOM 11 C2' G A 234 94.702 116.091 -6.695 1.00 63.12 C
ATOM 12 O2' G A 234 95.682 116.925 -6.117 1.00 63.37 O
ATOM 13 C1' G A 234 93.521 115.884 -5.751 1.00 63.88 C
ATOM 14 N9 G A 234 93.748 114.803 -4.796 1.00 65.09 N
ATOM 15 C8 G A 234 94.303 113.571 -5.054 1.00 64.86 C
ATOM 16 N7 G A 234 94.457 112.843 -3.983 1.00 65.69 N
ATOM 17 C5 G A 234 93.957 113.634 -2.956 1.00 66.71 C
ATOM 18 C6 G A 234 93.875 113.385 -1.561 1.00 66.96 C
ATOM 19 O6 G A 234 94.244 112.388 -0.932 1.00 66.73 O
ATOM 20 N1 G A 234 93.292 114.451 -0.886 1.00 67.00 N
ATOM 21 C2 G A 234 92.843 115.607 -1.472 1.00 66.58 C
ATOM 22 N2 G A 234 92.304 116.509 -0.643 1.00 66.83 N
ATOM 23 N3 G A 234 92.918 115.857 -2.770 1.00 66.15 N
ATOM 24 C4 G A 234 93.488 114.836 -3.447 1.00 65.95 C
ATOM 25 P A A 235 94.246 119.126 -8.859 1.00 64.86 P
ATOM 26 OP1 A A 235 93.717 118.588 -10.140 1.00 66.68 O
ATOM 27 OP2 A A 235 95.694 119.409 -8.724 1.00 64.12 O
ATOM 28 O5' A A 235 93.421 120.442 -8.519 1.00 63.20 O
TER
ATOM 1 O3' G B 252 91.243 119.642 3.494 1.00 50.13 O
ATOM 2 P U B 253 89.934 119.516 4.414 1.00 50.66 P
ATOM 3 OP1 U B 253 90.276 120.113 5.729 1.00 51.04 O
ATOM 4 OP2 U B 253 89.461 118.114 4.347 1.00 50.71 O
ATOM 5 O5' U B 253 88.849 120.440 3.700 1.00 50.86 O
ATOM 6 C5' U B 253 88.672 121.817 4.084 1.00 50.72 C
ATOM 7 C4' U B 253 88.324 122.648 2.877 1.00 51.56 C
ATOM 8 O4' U B 253 89.470 122.722 1.991 1.00 52.81 O
ATOM 9 C3' U B 253 87.228 122.057 2.015 1.00 52.39 C
ATOM 10 O3' U B 253 85.950 122.389 2.524 1.00 53.98 O
ATOM 11 C2' U B 253 87.502 122.683 0.657 1.00 52.57 C
ATOM 12 O2' U B 253 87.005 124.001 0.558 1.00 53.17 O
ATOM 13 C1' U B 253 89.035 122.705 0.640 1.00 52.32 C
ATOM 14 N1 U B 253 89.647 121.547 -0.036 1.00 51.49 N
ATOM 15 C2 U B 253 89.433 121.401 -1.402 1.00 51.23 C
ATOM 16 O2 U B 253 88.792 122.198 -2.071 1.00 52.46 O
ATOM 17 N3 U B 253 90.000 120.287 -1.958 1.00 49.65 N
ATOM 18 C4 U B 253 90.745 119.328 -1.320 1.00 51.07 C
ATOM 19 O4 U B 253 91.145 118.355 -1.960 1.00 51.63 O
ATOM 20 C5 U B 253 90.943 119.555 0.081 1.00 51.11 C
ATOM 21 C6 U B 253 90.402 120.627 0.660 1.00 50.07 C
ATOM 22 P G B 254 84.828 121.252 2.633 1.00 55.20 P
ATOM 23 OP1 G B 254 83.582 121.901 3.134 1.00 52.77 O
ATOM 24 OP2 G B 254 85.431 120.118 3.382 1.00 53.98 O
ATOM 25 O5' G B 254 84.607 120.775 1.126 1.00 55.45 O
TER
Atoms:
OP1: (94.213,112.911,-10.858)
OP2: (94.794,111.660,-8.689)
C3': (94.016,116.708,-7.905)
C1': (93.521,115.884,-5.751)
C5': (92.614,114.800,-8.859)
O6: (94.244,112.388,-0.932)
O4': (92.424,115.540,-6.570)
C8: (94.303,113.571,-5.054)
C2: (92.843,115.607,-1.472)
C6: (93.875,113.385,-1.561)
C5: (93.957,113.634,-2.956)
C4: (93.488,114.836,-3.447)
P: (93.902,112.578,-9.441)
C4': (92.673,115.986,-7.931)
C2': (94.702,116.091,-6.695)
O2': (95.682,116.925,-6.117)
N1: (93.292,114.451,-0.886)
N2: (92.304,116.509,-0.643)
N3: (92.918,115.857,-2.770)
N7: (94.457,112.843,-3.983)
N9: (93.748,114.803,-4.796)
O5': (93.737,113.929,-8.619)
O3': (93.814,118.095,-7.708)
OP2: (94.794,111.660,-8.689)
C3': (94.016,116.708,-7.905)
C1': (93.521,115.884,-5.751)
C5': (92.614,114.800,-8.859)
O6: (94.244,112.388,-0.932)
O4': (92.424,115.540,-6.570)
C8: (94.303,113.571,-5.054)
C2: (92.843,115.607,-1.472)
C6: (93.875,113.385,-1.561)
C5: (93.957,113.634,-2.956)
C4: (93.488,114.836,-3.447)
P: (93.902,112.578,-9.441)
C4': (92.673,115.986,-7.931)
C2': (94.702,116.091,-6.695)
O2': (95.682,116.925,-6.117)
N1: (93.292,114.451,-0.886)
N2: (92.304,116.509,-0.643)
N3: (92.918,115.857,-2.770)
N7: (94.457,112.843,-3.983)
N9: (93.748,114.803,-4.796)
O5': (93.737,113.929,-8.619)
O3': (93.814,118.095,-7.708)
C4: (90.745,119.328,-1.320)
N3: (90.000,120.287,-1.958)
OP1: (90.276,120.113,5.729)
OP2: (89.461,118.114,4.347)
C2: (89.433,121.401,-1.402)
C1': (89.035,122.705,0.640)
C3': (87.228,122.057,2.015)
O5': (88.849,120.440,3.700)
O4': (89.470,122.722,1.991)
C5': (88.672,121.817,4.084)
P: (89.934,119.516,4.414)
C4': (88.324,122.648,2.877)
C2': (87.502,122.683,0.657)
O2': (87.005,124.001,0.558)
N1: (89.647,121.547,-0.036)
O4: (91.145,118.355,-1.960)
O2: (88.792,122.198,-2.071)
C6: (90.402,120.627,0.660)
C5: (90.943,119.555,0.081)
O3': (85.950,122.389,2.524)
N3: (90.000,120.287,-1.958)
OP1: (90.276,120.113,5.729)
OP2: (89.461,118.114,4.347)
C2: (89.433,121.401,-1.402)
C1': (89.035,122.705,0.640)
C3': (87.228,122.057,2.015)
O5': (88.849,120.440,3.700)
O4': (89.470,122.722,1.991)
C5': (88.672,121.817,4.084)
P: (89.934,119.516,4.414)
C4': (88.324,122.648,2.877)
C2': (87.502,122.683,0.657)
O2': (87.005,124.001,0.558)
N1: (89.647,121.547,-0.036)
O4: (91.145,118.355,-1.960)
O2: (88.792,122.198,-2.071)
C6: (90.402,120.627,0.660)
C5: (90.943,119.555,0.081)
O3': (85.950,122.389,2.524)
Image (generated by PyMOL):