Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11843:12143
Extra
PDB:
ATOM 1 O3' G A1842 -2.128 42.275 59.682 1.00 47.41 O
ATOM 2 P G A1843 -2.833 41.821 61.058 1.00 49.73 P
ATOM 3 OP1 G A1843 -4.187 41.257 60.709 1.00 49.88 O
ATOM 4 OP2 G A1843 -2.760 42.961 62.008 1.00 50.06 O
ATOM 5 O5' G A1843 -1.883 40.672 61.555 1.00 49.12 O
ATOM 6 C5' G A1843 -1.751 39.464 60.852 1.00 48.73 C
ATOM 7 C4' G A1843 -0.821 38.571 61.588 1.00 48.22 C
ATOM 8 O4' G A1843 0.391 39.323 61.879 1.00 48.18 O
ATOM 9 C3' G A1843 -1.346 38.126 62.926 1.00 48.14 C
ATOM 10 O3' G A1843 -0.743 36.911 63.267 1.00 47.63 O
ATOM 11 C2' G A1843 -0.827 39.205 63.837 1.00 48.34 C
ATOM 12 O2' G A1843 -0.786 38.862 65.191 1.00 48.19 O
ATOM 13 C1' G A1843 0.552 39.435 63.270 1.00 48.13 C
ATOM 14 N9 G A1843 1.096 40.758 63.598 1.00 48.43 N
ATOM 15 C8 G A1843 0.484 41.961 63.426 1.00 48.96 C
ATOM 16 N7 G A1843 1.136 42.997 63.848 1.00 49.16 N
ATOM 17 C5 G A1843 2.246 42.423 64.386 1.00 48.73 C
ATOM 18 C6 G A1843 3.317 43.035 65.028 1.00 48.71 C
ATOM 19 O6 G A1843 3.498 44.231 65.230 1.00 49.08 O
ATOM 20 N1 G A1843 4.288 42.125 65.426 1.00 48.21 N
ATOM 21 C2 G A1843 4.247 40.796 65.242 1.00 47.78 C
ATOM 22 N2 G A1843 5.302 40.145 65.722 1.00 47.37 N
ATOM 23 N3 G A1843 3.231 40.198 64.656 1.00 47.80 N
ATOM 24 C4 G A1843 2.263 41.065 64.247 1.00 48.28 C
ATOM 25 P A A1844 -1.638 35.625 63.555 1.00 42.74 P
ATOM 26 OP1 A A1844 -2.542 35.452 62.378 1.00 42.93 O
ATOM 27 OP2 A A1844 -2.215 35.800 64.901 1.00 42.89 O
ATOM 28 O5' A A1844 -0.558 34.472 63.560 1.00 42.17 O
TER
ATOM 1 O3' G B2142 11.912 38.617 67.342 1.00 40.36 O
ATOM 2 P U B2143 11.888 37.408 68.369 1.00 45.29 P
ATOM 3 OP1 U B2143 11.046 37.818 69.480 1.00 45.56 O
ATOM 4 OP2 U B2143 13.268 37.027 68.647 1.00 44.97 O
ATOM 5 O5' U B2143 11.204 36.260 67.540 1.00 45.05 O
ATOM 6 C5' U B2143 11.890 35.045 67.320 1.00 44.59 C
ATOM 7 C4' U B2143 11.124 34.100 66.424 1.00 44.44 C
ATOM 8 O4' U B2143 9.735 34.005 66.815 1.00 44.64 O
ATOM 9 C3' U B2143 11.058 34.448 64.961 1.00 44.56 C
ATOM 10 O3' U B2143 12.268 34.173 64.307 1.00 44.30 O
ATOM 11 C2' U B2143 9.955 33.534 64.510 1.00 44.49 C
ATOM 12 O2' U B2143 10.426 32.212 64.467 1.00 44.05 O
ATOM 13 C1' U B2143 8.973 33.649 65.683 1.00 44.67 C
ATOM 14 N1 U B2143 7.925 34.707 65.424 1.00 45.15 N
ATOM 15 C2 U B2143 7.071 34.487 64.349 1.00 45.25 C
ATOM 16 O2 U B2143 7.115 33.510 63.637 1.00 44.99 O
ATOM 17 N3 U B2143 6.158 35.457 64.105 1.00 45.70 N
ATOM 18 C4 U B2143 6.009 36.609 64.817 1.00 46.05 C
ATOM 19 O4 U B2143 5.142 37.403 64.478 1.00 46.46 O
ATOM 20 C5 U B2143 6.915 36.766 65.906 1.00 45.92 C
ATOM 21 C6 U B2143 7.831 35.851 66.173 1.00 45.49 C
ATOM 22 P C B2144 12.944 35.215 63.287 1.00 43.06 P
ATOM 23 OP1 C B2144 14.331 34.692 63.045 1.00 42.71 O
ATOM 24 OP2 C B2144 12.788 36.580 63.861 1.00 43.47 O
ATOM 25 O5' C B2144 12.041 35.072 61.956 1.00 43.20 O
TER
ATOM 2 P G A1843 -2.833 41.821 61.058 1.00 49.73 P
ATOM 3 OP1 G A1843 -4.187 41.257 60.709 1.00 49.88 O
ATOM 4 OP2 G A1843 -2.760 42.961 62.008 1.00 50.06 O
ATOM 5 O5' G A1843 -1.883 40.672 61.555 1.00 49.12 O
ATOM 6 C5' G A1843 -1.751 39.464 60.852 1.00 48.73 C
ATOM 7 C4' G A1843 -0.821 38.571 61.588 1.00 48.22 C
ATOM 8 O4' G A1843 0.391 39.323 61.879 1.00 48.18 O
ATOM 9 C3' G A1843 -1.346 38.126 62.926 1.00 48.14 C
ATOM 10 O3' G A1843 -0.743 36.911 63.267 1.00 47.63 O
ATOM 11 C2' G A1843 -0.827 39.205 63.837 1.00 48.34 C
ATOM 12 O2' G A1843 -0.786 38.862 65.191 1.00 48.19 O
ATOM 13 C1' G A1843 0.552 39.435 63.270 1.00 48.13 C
ATOM 14 N9 G A1843 1.096 40.758 63.598 1.00 48.43 N
ATOM 15 C8 G A1843 0.484 41.961 63.426 1.00 48.96 C
ATOM 16 N7 G A1843 1.136 42.997 63.848 1.00 49.16 N
ATOM 17 C5 G A1843 2.246 42.423 64.386 1.00 48.73 C
ATOM 18 C6 G A1843 3.317 43.035 65.028 1.00 48.71 C
ATOM 19 O6 G A1843 3.498 44.231 65.230 1.00 49.08 O
ATOM 20 N1 G A1843 4.288 42.125 65.426 1.00 48.21 N
ATOM 21 C2 G A1843 4.247 40.796 65.242 1.00 47.78 C
ATOM 22 N2 G A1843 5.302 40.145 65.722 1.00 47.37 N
ATOM 23 N3 G A1843 3.231 40.198 64.656 1.00 47.80 N
ATOM 24 C4 G A1843 2.263 41.065 64.247 1.00 48.28 C
ATOM 25 P A A1844 -1.638 35.625 63.555 1.00 42.74 P
ATOM 26 OP1 A A1844 -2.542 35.452 62.378 1.00 42.93 O
ATOM 27 OP2 A A1844 -2.215 35.800 64.901 1.00 42.89 O
ATOM 28 O5' A A1844 -0.558 34.472 63.560 1.00 42.17 O
TER
ATOM 1 O3' G B2142 11.912 38.617 67.342 1.00 40.36 O
ATOM 2 P U B2143 11.888 37.408 68.369 1.00 45.29 P
ATOM 3 OP1 U B2143 11.046 37.818 69.480 1.00 45.56 O
ATOM 4 OP2 U B2143 13.268 37.027 68.647 1.00 44.97 O
ATOM 5 O5' U B2143 11.204 36.260 67.540 1.00 45.05 O
ATOM 6 C5' U B2143 11.890 35.045 67.320 1.00 44.59 C
ATOM 7 C4' U B2143 11.124 34.100 66.424 1.00 44.44 C
ATOM 8 O4' U B2143 9.735 34.005 66.815 1.00 44.64 O
ATOM 9 C3' U B2143 11.058 34.448 64.961 1.00 44.56 C
ATOM 10 O3' U B2143 12.268 34.173 64.307 1.00 44.30 O
ATOM 11 C2' U B2143 9.955 33.534 64.510 1.00 44.49 C
ATOM 12 O2' U B2143 10.426 32.212 64.467 1.00 44.05 O
ATOM 13 C1' U B2143 8.973 33.649 65.683 1.00 44.67 C
ATOM 14 N1 U B2143 7.925 34.707 65.424 1.00 45.15 N
ATOM 15 C2 U B2143 7.071 34.487 64.349 1.00 45.25 C
ATOM 16 O2 U B2143 7.115 33.510 63.637 1.00 44.99 O
ATOM 17 N3 U B2143 6.158 35.457 64.105 1.00 45.70 N
ATOM 18 C4 U B2143 6.009 36.609 64.817 1.00 46.05 C
ATOM 19 O4 U B2143 5.142 37.403 64.478 1.00 46.46 O
ATOM 20 C5 U B2143 6.915 36.766 65.906 1.00 45.92 C
ATOM 21 C6 U B2143 7.831 35.851 66.173 1.00 45.49 C
ATOM 22 P C B2144 12.944 35.215 63.287 1.00 43.06 P
ATOM 23 OP1 C B2144 14.331 34.692 63.045 1.00 42.71 O
ATOM 24 OP2 C B2144 12.788 36.580 63.861 1.00 43.47 O
ATOM 25 O5' C B2144 12.041 35.072 61.956 1.00 43.20 O
TER
Atoms:
OP1: (-4.187,41.257,60.709)
OP2: (-2.760,42.961,62.008)
C3': (-1.346,38.126,62.926)
C1': (0.552,39.435,63.270)
C5': (-1.751,39.464,60.852)
O6: (3.498,44.231,65.230)
O4': (0.391,39.323,61.879)
C8: (0.484,41.961,63.426)
C2: (4.247,40.796,65.242)
C6: (3.317,43.035,65.028)
C5: (2.246,42.423,64.386)
C4: (2.263,41.065,64.247)
P: (-2.833,41.821,61.058)
C4': (-0.821,38.571,61.588)
C2': (-0.827,39.205,63.837)
O2': (-0.786,38.862,65.191)
N1: (4.288,42.125,65.426)
N2: (5.302,40.145,65.722)
N3: (3.231,40.198,64.656)
N7: (1.136,42.997,63.848)
N9: (1.096,40.758,63.598)
O5': (-1.883,40.672,61.555)
O3': (-0.743,36.911,63.267)
OP2: (-2.760,42.961,62.008)
C3': (-1.346,38.126,62.926)
C1': (0.552,39.435,63.270)
C5': (-1.751,39.464,60.852)
O6: (3.498,44.231,65.230)
O4': (0.391,39.323,61.879)
C8: (0.484,41.961,63.426)
C2: (4.247,40.796,65.242)
C6: (3.317,43.035,65.028)
C5: (2.246,42.423,64.386)
C4: (2.263,41.065,64.247)
P: (-2.833,41.821,61.058)
C4': (-0.821,38.571,61.588)
C2': (-0.827,39.205,63.837)
O2': (-0.786,38.862,65.191)
N1: (4.288,42.125,65.426)
N2: (5.302,40.145,65.722)
N3: (3.231,40.198,64.656)
N7: (1.136,42.997,63.848)
N9: (1.096,40.758,63.598)
O5': (-1.883,40.672,61.555)
O3': (-0.743,36.911,63.267)
C4: (6.009,36.609,64.817)
N3: (6.158,35.457,64.105)
OP1: (11.046,37.818,69.480)
OP2: (13.268,37.027,68.647)
C2: (7.071,34.487,64.349)
C1': (8.973,33.649,65.683)
C3': (11.058,34.448,64.961)
O5': (11.204,36.260,67.540)
O4': (9.735,34.005,66.815)
C5': (11.890,35.045,67.320)
P: (11.888,37.408,68.369)
C4': (11.124,34.100,66.424)
C2': (9.955,33.534,64.510)
O2': (10.426,32.212,64.467)
N1: (7.925,34.707,65.424)
O4: (5.142,37.403,64.478)
O2: (7.115,33.510,63.637)
C6: (7.831,35.851,66.173)
C5: (6.915,36.766,65.906)
O3': (12.268,34.173,64.307)
N3: (6.158,35.457,64.105)
OP1: (11.046,37.818,69.480)
OP2: (13.268,37.027,68.647)
C2: (7.071,34.487,64.349)
C1': (8.973,33.649,65.683)
C3': (11.058,34.448,64.961)
O5': (11.204,36.260,67.540)
O4': (9.735,34.005,66.815)
C5': (11.890,35.045,67.320)
P: (11.888,37.408,68.369)
C4': (11.124,34.100,66.424)
C2': (9.955,33.534,64.510)
O2': (10.426,32.212,64.467)
N1: (7.925,34.707,65.424)
O4: (5.142,37.403,64.478)
O2: (7.115,33.510,63.637)
C6: (7.831,35.851,66.173)
C5: (6.915,36.766,65.906)
O3': (12.268,34.173,64.307)
Image (generated by PyMOL):