Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1348:A1394
Extra
PDB:
ATOM 1 O3' U A1347 45.987 187.691 75.235 1.00 54.18 O
ATOM 2 P G A1348 44.396 187.811 75.331 1.00 52.29 P
ATOM 3 OP1 G A1348 44.013 188.301 73.995 1.00 51.84 O
ATOM 4 OP2 G A1348 44.073 188.611 76.544 1.00 51.97 O
ATOM 5 O5' G A1348 43.869 186.320 75.531 1.00 53.05 O
ATOM 6 C5' G A1348 44.167 185.283 74.575 1.00 54.48 C
ATOM 7 C4' G A1348 44.053 183.928 75.236 1.00 54.68 C
ATOM 8 O4' G A1348 45.034 183.815 76.302 1.00 54.71 O
ATOM 9 C3' G A1348 42.729 183.691 75.936 1.00 55.09 C
ATOM 10 O3' G A1348 41.775 183.229 74.995 1.00 54.60 O
ATOM 11 C2' G A1348 43.085 182.616 76.950 1.00 55.34 C
ATOM 12 O2' G A1348 43.151 181.359 76.314 1.00 56.23 O
ATOM 13 C1' G A1348 44.495 183.052 77.368 1.00 56.17 C
ATOM 14 N9 G A1348 44.478 183.887 78.564 1.00 57.52 N
ATOM 15 C8 G A1348 44.394 185.255 78.611 1.00 56.99 C
ATOM 16 N7 G A1348 44.290 185.720 79.824 1.00 57.90 N
ATOM 17 C5 G A1348 44.329 184.594 80.629 1.00 58.53 C
ATOM 18 C6 G A1348 44.222 184.472 82.039 1.00 59.28 C
ATOM 19 O6 G A1348 44.018 185.360 82.876 1.00 59.08 O
ATOM 20 N1 G A1348 44.352 183.146 82.450 1.00 59.90 N
ATOM 21 C2 G A1348 44.534 182.073 81.610 1.00 59.12 C
ATOM 22 N2 G A1348 44.666 180.881 82.197 1.00 56.61 N
ATOM 23 N3 G A1348 44.590 182.171 80.288 1.00 59.01 N
ATOM 24 C4 G A1348 44.484 183.455 79.870 1.00 58.71 C
ATOM 25 P A A1349 40.249 183.673 75.134 1.00 55.33 P
ATOM 26 OP1 A A1349 39.479 183.145 73.978 1.00 55.30 O
ATOM 27 OP2 A A1349 40.268 185.117 75.410 1.00 56.10 O
ATOM 28 O5' A A1349 39.737 182.956 76.449 1.00 53.84 O
TER
ATOM 1 O3' A B1393 47.312 174.446 77.211 1.00 49.26 O
ATOM 2 P U B1394 47.186 174.337 75.627 1.00 49.29 P
ATOM 3 OP1 U B1394 45.747 174.460 75.287 1.00 49.04 O
ATOM 4 OP2 U B1394 47.948 173.134 75.217 1.00 49.86 O
ATOM 5 O5' U B1394 47.996 175.611 75.140 1.00 46.85 O
ATOM 6 C5' U B1394 47.751 176.230 73.882 1.00 44.92 C
ATOM 7 C4' U B1394 48.181 177.664 73.962 1.00 44.26 C
ATOM 8 O4' U B1394 47.349 178.362 74.941 1.00 44.63 O
ATOM 9 C3' U B1394 49.614 177.817 74.447 1.00 42.77 C
ATOM 10 O3' U B1394 50.210 178.938 73.837 1.00 41.17 O
ATOM 11 C2' U B1394 49.449 178.038 75.943 1.00 43.60 C
ATOM 12 O2' U B1394 50.570 178.705 76.481 1.00 44.47 O
ATOM 13 C1' U B1394 48.161 178.867 75.991 1.00 43.19 C
ATOM 14 N1 U B1394 47.405 178.754 77.254 1.00 42.00 N
ATOM 15 C2 U B1394 46.886 179.914 77.815 1.00 43.06 C
ATOM 16 O2 U B1394 47.023 181.029 77.308 1.00 45.21 O
ATOM 17 N3 U B1394 46.200 179.725 78.993 1.00 41.88 N
ATOM 18 C4 U B1394 45.980 178.537 79.650 1.00 40.53 C
ATOM 19 O4 U B1394 45.415 178.548 80.741 1.00 43.63 O
ATOM 20 C5 U B1394 46.533 177.396 79.010 1.00 41.28 C
ATOM 21 C6 U B1394 47.213 177.535 77.868 1.00 41.55 C
ATOM 22 P C B1395 51.261 178.707 72.666 1.00 42.86 P
ATOM 23 OP1 C B1395 51.828 180.013 72.277 1.00 43.69 O
ATOM 24 OP2 C B1395 50.599 177.854 71.643 1.00 43.72 O
ATOM 25 O5' C B1395 52.419 177.908 73.397 1.00 42.13 O
TER
ATOM 2 P G A1348 44.396 187.811 75.331 1.00 52.29 P
ATOM 3 OP1 G A1348 44.013 188.301 73.995 1.00 51.84 O
ATOM 4 OP2 G A1348 44.073 188.611 76.544 1.00 51.97 O
ATOM 5 O5' G A1348 43.869 186.320 75.531 1.00 53.05 O
ATOM 6 C5' G A1348 44.167 185.283 74.575 1.00 54.48 C
ATOM 7 C4' G A1348 44.053 183.928 75.236 1.00 54.68 C
ATOM 8 O4' G A1348 45.034 183.815 76.302 1.00 54.71 O
ATOM 9 C3' G A1348 42.729 183.691 75.936 1.00 55.09 C
ATOM 10 O3' G A1348 41.775 183.229 74.995 1.00 54.60 O
ATOM 11 C2' G A1348 43.085 182.616 76.950 1.00 55.34 C
ATOM 12 O2' G A1348 43.151 181.359 76.314 1.00 56.23 O
ATOM 13 C1' G A1348 44.495 183.052 77.368 1.00 56.17 C
ATOM 14 N9 G A1348 44.478 183.887 78.564 1.00 57.52 N
ATOM 15 C8 G A1348 44.394 185.255 78.611 1.00 56.99 C
ATOM 16 N7 G A1348 44.290 185.720 79.824 1.00 57.90 N
ATOM 17 C5 G A1348 44.329 184.594 80.629 1.00 58.53 C
ATOM 18 C6 G A1348 44.222 184.472 82.039 1.00 59.28 C
ATOM 19 O6 G A1348 44.018 185.360 82.876 1.00 59.08 O
ATOM 20 N1 G A1348 44.352 183.146 82.450 1.00 59.90 N
ATOM 21 C2 G A1348 44.534 182.073 81.610 1.00 59.12 C
ATOM 22 N2 G A1348 44.666 180.881 82.197 1.00 56.61 N
ATOM 23 N3 G A1348 44.590 182.171 80.288 1.00 59.01 N
ATOM 24 C4 G A1348 44.484 183.455 79.870 1.00 58.71 C
ATOM 25 P A A1349 40.249 183.673 75.134 1.00 55.33 P
ATOM 26 OP1 A A1349 39.479 183.145 73.978 1.00 55.30 O
ATOM 27 OP2 A A1349 40.268 185.117 75.410 1.00 56.10 O
ATOM 28 O5' A A1349 39.737 182.956 76.449 1.00 53.84 O
TER
ATOM 1 O3' A B1393 47.312 174.446 77.211 1.00 49.26 O
ATOM 2 P U B1394 47.186 174.337 75.627 1.00 49.29 P
ATOM 3 OP1 U B1394 45.747 174.460 75.287 1.00 49.04 O
ATOM 4 OP2 U B1394 47.948 173.134 75.217 1.00 49.86 O
ATOM 5 O5' U B1394 47.996 175.611 75.140 1.00 46.85 O
ATOM 6 C5' U B1394 47.751 176.230 73.882 1.00 44.92 C
ATOM 7 C4' U B1394 48.181 177.664 73.962 1.00 44.26 C
ATOM 8 O4' U B1394 47.349 178.362 74.941 1.00 44.63 O
ATOM 9 C3' U B1394 49.614 177.817 74.447 1.00 42.77 C
ATOM 10 O3' U B1394 50.210 178.938 73.837 1.00 41.17 O
ATOM 11 C2' U B1394 49.449 178.038 75.943 1.00 43.60 C
ATOM 12 O2' U B1394 50.570 178.705 76.481 1.00 44.47 O
ATOM 13 C1' U B1394 48.161 178.867 75.991 1.00 43.19 C
ATOM 14 N1 U B1394 47.405 178.754 77.254 1.00 42.00 N
ATOM 15 C2 U B1394 46.886 179.914 77.815 1.00 43.06 C
ATOM 16 O2 U B1394 47.023 181.029 77.308 1.00 45.21 O
ATOM 17 N3 U B1394 46.200 179.725 78.993 1.00 41.88 N
ATOM 18 C4 U B1394 45.980 178.537 79.650 1.00 40.53 C
ATOM 19 O4 U B1394 45.415 178.548 80.741 1.00 43.63 O
ATOM 20 C5 U B1394 46.533 177.396 79.010 1.00 41.28 C
ATOM 21 C6 U B1394 47.213 177.535 77.868 1.00 41.55 C
ATOM 22 P C B1395 51.261 178.707 72.666 1.00 42.86 P
ATOM 23 OP1 C B1395 51.828 180.013 72.277 1.00 43.69 O
ATOM 24 OP2 C B1395 50.599 177.854 71.643 1.00 43.72 O
ATOM 25 O5' C B1395 52.419 177.908 73.397 1.00 42.13 O
TER
Atoms:
OP1: (44.013,188.301,73.995)
OP2: (44.073,188.611,76.544)
C3': (42.729,183.691,75.936)
C1': (44.495,183.052,77.368)
C5': (44.167,185.283,74.575)
O6: (44.018,185.360,82.876)
O4': (45.034,183.815,76.302)
C8: (44.394,185.255,78.611)
C2: (44.534,182.073,81.610)
C6: (44.222,184.472,82.039)
C5: (44.329,184.594,80.629)
C4: (44.484,183.455,79.870)
P: (44.396,187.811,75.331)
C4': (44.053,183.928,75.236)
C2': (43.085,182.616,76.950)
O2': (43.151,181.359,76.314)
N1: (44.352,183.146,82.450)
N2: (44.666,180.881,82.197)
N3: (44.590,182.171,80.288)
N7: (44.290,185.720,79.824)
N9: (44.478,183.887,78.564)
O5': (43.869,186.320,75.531)
O3': (41.775,183.229,74.995)
OP2: (44.073,188.611,76.544)
C3': (42.729,183.691,75.936)
C1': (44.495,183.052,77.368)
C5': (44.167,185.283,74.575)
O6: (44.018,185.360,82.876)
O4': (45.034,183.815,76.302)
C8: (44.394,185.255,78.611)
C2: (44.534,182.073,81.610)
C6: (44.222,184.472,82.039)
C5: (44.329,184.594,80.629)
C4: (44.484,183.455,79.870)
P: (44.396,187.811,75.331)
C4': (44.053,183.928,75.236)
C2': (43.085,182.616,76.950)
O2': (43.151,181.359,76.314)
N1: (44.352,183.146,82.450)
N2: (44.666,180.881,82.197)
N3: (44.590,182.171,80.288)
N7: (44.290,185.720,79.824)
N9: (44.478,183.887,78.564)
O5': (43.869,186.320,75.531)
O3': (41.775,183.229,74.995)
C4: (45.980,178.537,79.650)
N3: (46.200,179.725,78.993)
OP1: (45.747,174.460,75.287)
OP2: (47.948,173.134,75.217)
C2: (46.886,179.914,77.815)
C1': (48.161,178.867,75.991)
C3': (49.614,177.817,74.447)
O5': (47.996,175.611,75.140)
O4': (47.349,178.362,74.941)
C5': (47.751,176.230,73.882)
P: (47.186,174.337,75.627)
C4': (48.181,177.664,73.962)
C2': (49.449,178.038,75.943)
O2': (50.570,178.705,76.481)
N1: (47.405,178.754,77.254)
O4: (45.415,178.548,80.741)
O2: (47.023,181.029,77.308)
C6: (47.213,177.535,77.868)
C5: (46.533,177.396,79.010)
O3': (50.210,178.938,73.837)
N3: (46.200,179.725,78.993)
OP1: (45.747,174.460,75.287)
OP2: (47.948,173.134,75.217)
C2: (46.886,179.914,77.815)
C1': (48.161,178.867,75.991)
C3': (49.614,177.817,74.447)
O5': (47.996,175.611,75.140)
O4': (47.349,178.362,74.941)
C5': (47.751,176.230,73.882)
P: (47.186,174.337,75.627)
C4': (48.181,177.664,73.962)
C2': (49.449,178.038,75.943)
O2': (50.570,178.705,76.481)
N1: (47.405,178.754,77.254)
O4: (45.415,178.548,80.741)
O2: (47.023,181.029,77.308)
C6: (47.213,177.535,77.868)
C5: (46.533,177.396,79.010)
O3': (50.210,178.938,73.837)
Image (generated by PyMOL):