Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01348:01394
Extra
PDB:
ATOM 1 O3' U A1347 46.036 187.800 74.982 1.00 51.89 O
ATOM 2 P G A1348 44.439 187.917 75.112 1.00 52.31 P
ATOM 3 OP1 G A1348 43.961 188.357 73.765 1.00 51.19 O
ATOM 4 OP2 G A1348 44.101 188.713 76.312 1.00 49.85 O
ATOM 5 O5' G A1348 43.955 186.425 75.375 1.00 51.07 O
ATOM 6 C5' G A1348 44.217 185.394 74.413 1.00 51.62 C
ATOM 7 C4' G A1348 44.094 184.040 75.055 1.00 51.37 C
ATOM 8 O4' G A1348 45.063 183.928 76.128 1.00 51.50 O
ATOM 9 C3' G A1348 42.762 183.774 75.727 1.00 52.58 C
ATOM 10 O3' G A1348 41.798 183.334 74.779 1.00 54.18 O
ATOM 11 C2' G A1348 43.130 182.697 76.735 1.00 52.87 C
ATOM 12 O2' G A1348 43.276 181.436 76.123 1.00 54.20 O
ATOM 13 C1' G A1348 44.507 183.181 77.195 1.00 52.74 C
ATOM 14 N9 G A1348 44.428 184.044 78.370 1.00 53.77 N
ATOM 15 C8 G A1348 44.299 185.411 78.388 1.00 54.17 C
ATOM 16 N7 G A1348 44.215 185.900 79.594 1.00 55.25 N
ATOM 17 C5 G A1348 44.303 184.791 80.422 1.00 55.20 C
ATOM 18 C6 G A1348 44.264 184.696 81.835 1.00 56.08 C
ATOM 19 O6 G A1348 44.138 185.606 82.669 1.00 56.35 O
ATOM 20 N1 G A1348 44.388 183.379 82.260 1.00 57.37 N
ATOM 21 C2 G A1348 44.531 182.292 81.434 1.00 57.24 C
ATOM 22 N2 G A1348 44.638 181.096 82.034 1.00 57.11 N
ATOM 23 N3 G A1348 44.567 182.370 80.117 1.00 56.77 N
ATOM 24 C4 G A1348 44.446 183.640 79.682 1.00 54.89 C
ATOM 25 P A A1349 40.260 183.789 74.927 1.00 55.64 P
ATOM 26 OP1 A A1349 39.522 183.237 73.758 1.00 55.28 O
ATOM 27 OP2 A A1349 40.235 185.251 75.188 1.00 53.92 O
ATOM 28 O5' A A1349 39.751 183.040 76.236 1.00 52.55 O
TER
ATOM 1 O3' A B1393 47.247 174.530 76.890 1.00 48.16 O
ATOM 2 P U B1394 47.130 174.386 75.297 1.00 49.11 P
ATOM 3 OP1 U B1394 45.734 174.734 74.932 1.00 49.18 O
ATOM 4 OP2 U B1394 47.697 173.082 74.861 1.00 49.11 O
ATOM 5 O5' U B1394 48.083 175.537 74.766 1.00 46.16 O
ATOM 6 C5' U B1394 47.743 176.287 73.600 1.00 44.87 C
ATOM 7 C4' U B1394 48.180 177.716 73.769 1.00 43.46 C
ATOM 8 O4' U B1394 47.330 178.375 74.748 1.00 42.07 O
ATOM 9 C3' U B1394 49.610 177.898 74.258 1.00 42.39 C
ATOM 10 O3' U B1394 50.179 179.013 73.622 1.00 41.01 O
ATOM 11 C2' U B1394 49.434 178.168 75.744 1.00 42.97 C
ATOM 12 O2' U B1394 50.478 178.942 76.296 1.00 44.94 O
ATOM 13 C1' U B1394 48.131 178.954 75.752 1.00 41.77 C
ATOM 14 N1 U B1394 47.398 178.885 77.021 1.00 42.48 N
ATOM 15 C2 U B1394 46.864 180.058 77.509 1.00 43.10 C
ATOM 16 O2 U B1394 46.997 181.133 76.948 1.00 45.01 O
ATOM 17 N3 U B1394 46.172 179.932 78.684 1.00 42.09 N
ATOM 18 C4 U B1394 45.969 178.784 79.405 1.00 41.61 C
ATOM 19 O4 U B1394 45.272 178.827 80.415 1.00 44.26 O
ATOM 20 C5 U B1394 46.563 177.615 78.848 1.00 41.91 C
ATOM 21 C6 U B1394 47.240 177.701 77.702 1.00 42.30 C
ATOM 22 P C B1395 51.189 178.776 72.414 1.00 44.02 P
ATOM 23 OP1 C B1395 51.605 180.113 71.911 1.00 43.99 O
ATOM 24 OP2 C B1395 50.541 177.807 71.491 1.00 43.08 O
ATOM 25 O5' C B1395 52.433 178.049 73.094 1.00 44.26 O
TER
ATOM 2 P G A1348 44.439 187.917 75.112 1.00 52.31 P
ATOM 3 OP1 G A1348 43.961 188.357 73.765 1.00 51.19 O
ATOM 4 OP2 G A1348 44.101 188.713 76.312 1.00 49.85 O
ATOM 5 O5' G A1348 43.955 186.425 75.375 1.00 51.07 O
ATOM 6 C5' G A1348 44.217 185.394 74.413 1.00 51.62 C
ATOM 7 C4' G A1348 44.094 184.040 75.055 1.00 51.37 C
ATOM 8 O4' G A1348 45.063 183.928 76.128 1.00 51.50 O
ATOM 9 C3' G A1348 42.762 183.774 75.727 1.00 52.58 C
ATOM 10 O3' G A1348 41.798 183.334 74.779 1.00 54.18 O
ATOM 11 C2' G A1348 43.130 182.697 76.735 1.00 52.87 C
ATOM 12 O2' G A1348 43.276 181.436 76.123 1.00 54.20 O
ATOM 13 C1' G A1348 44.507 183.181 77.195 1.00 52.74 C
ATOM 14 N9 G A1348 44.428 184.044 78.370 1.00 53.77 N
ATOM 15 C8 G A1348 44.299 185.411 78.388 1.00 54.17 C
ATOM 16 N7 G A1348 44.215 185.900 79.594 1.00 55.25 N
ATOM 17 C5 G A1348 44.303 184.791 80.422 1.00 55.20 C
ATOM 18 C6 G A1348 44.264 184.696 81.835 1.00 56.08 C
ATOM 19 O6 G A1348 44.138 185.606 82.669 1.00 56.35 O
ATOM 20 N1 G A1348 44.388 183.379 82.260 1.00 57.37 N
ATOM 21 C2 G A1348 44.531 182.292 81.434 1.00 57.24 C
ATOM 22 N2 G A1348 44.638 181.096 82.034 1.00 57.11 N
ATOM 23 N3 G A1348 44.567 182.370 80.117 1.00 56.77 N
ATOM 24 C4 G A1348 44.446 183.640 79.682 1.00 54.89 C
ATOM 25 P A A1349 40.260 183.789 74.927 1.00 55.64 P
ATOM 26 OP1 A A1349 39.522 183.237 73.758 1.00 55.28 O
ATOM 27 OP2 A A1349 40.235 185.251 75.188 1.00 53.92 O
ATOM 28 O5' A A1349 39.751 183.040 76.236 1.00 52.55 O
TER
ATOM 1 O3' A B1393 47.247 174.530 76.890 1.00 48.16 O
ATOM 2 P U B1394 47.130 174.386 75.297 1.00 49.11 P
ATOM 3 OP1 U B1394 45.734 174.734 74.932 1.00 49.18 O
ATOM 4 OP2 U B1394 47.697 173.082 74.861 1.00 49.11 O
ATOM 5 O5' U B1394 48.083 175.537 74.766 1.00 46.16 O
ATOM 6 C5' U B1394 47.743 176.287 73.600 1.00 44.87 C
ATOM 7 C4' U B1394 48.180 177.716 73.769 1.00 43.46 C
ATOM 8 O4' U B1394 47.330 178.375 74.748 1.00 42.07 O
ATOM 9 C3' U B1394 49.610 177.898 74.258 1.00 42.39 C
ATOM 10 O3' U B1394 50.179 179.013 73.622 1.00 41.01 O
ATOM 11 C2' U B1394 49.434 178.168 75.744 1.00 42.97 C
ATOM 12 O2' U B1394 50.478 178.942 76.296 1.00 44.94 O
ATOM 13 C1' U B1394 48.131 178.954 75.752 1.00 41.77 C
ATOM 14 N1 U B1394 47.398 178.885 77.021 1.00 42.48 N
ATOM 15 C2 U B1394 46.864 180.058 77.509 1.00 43.10 C
ATOM 16 O2 U B1394 46.997 181.133 76.948 1.00 45.01 O
ATOM 17 N3 U B1394 46.172 179.932 78.684 1.00 42.09 N
ATOM 18 C4 U B1394 45.969 178.784 79.405 1.00 41.61 C
ATOM 19 O4 U B1394 45.272 178.827 80.415 1.00 44.26 O
ATOM 20 C5 U B1394 46.563 177.615 78.848 1.00 41.91 C
ATOM 21 C6 U B1394 47.240 177.701 77.702 1.00 42.30 C
ATOM 22 P C B1395 51.189 178.776 72.414 1.00 44.02 P
ATOM 23 OP1 C B1395 51.605 180.113 71.911 1.00 43.99 O
ATOM 24 OP2 C B1395 50.541 177.807 71.491 1.00 43.08 O
ATOM 25 O5' C B1395 52.433 178.049 73.094 1.00 44.26 O
TER
Atoms:
OP1: (43.961,188.357,73.765)
OP2: (44.101,188.713,76.312)
C3': (42.762,183.774,75.727)
C1': (44.507,183.181,77.195)
C5': (44.217,185.394,74.413)
O6: (44.138,185.606,82.669)
O4': (45.063,183.928,76.128)
C8: (44.299,185.411,78.388)
C2: (44.531,182.292,81.434)
C6: (44.264,184.696,81.835)
C5: (44.303,184.791,80.422)
C4: (44.446,183.640,79.682)
P: (44.439,187.917,75.112)
C4': (44.094,184.040,75.055)
C2': (43.130,182.697,76.735)
O2': (43.276,181.436,76.123)
N1: (44.388,183.379,82.260)
N2: (44.638,181.096,82.034)
N3: (44.567,182.370,80.117)
N7: (44.215,185.900,79.594)
N9: (44.428,184.044,78.370)
O5': (43.955,186.425,75.375)
O3': (41.798,183.334,74.779)
OP2: (44.101,188.713,76.312)
C3': (42.762,183.774,75.727)
C1': (44.507,183.181,77.195)
C5': (44.217,185.394,74.413)
O6: (44.138,185.606,82.669)
O4': (45.063,183.928,76.128)
C8: (44.299,185.411,78.388)
C2: (44.531,182.292,81.434)
C6: (44.264,184.696,81.835)
C5: (44.303,184.791,80.422)
C4: (44.446,183.640,79.682)
P: (44.439,187.917,75.112)
C4': (44.094,184.040,75.055)
C2': (43.130,182.697,76.735)
O2': (43.276,181.436,76.123)
N1: (44.388,183.379,82.260)
N2: (44.638,181.096,82.034)
N3: (44.567,182.370,80.117)
N7: (44.215,185.900,79.594)
N9: (44.428,184.044,78.370)
O5': (43.955,186.425,75.375)
O3': (41.798,183.334,74.779)
C4: (45.969,178.784,79.405)
N3: (46.172,179.932,78.684)
OP1: (45.734,174.734,74.932)
OP2: (47.697,173.082,74.861)
C2: (46.864,180.058,77.509)
C1': (48.131,178.954,75.752)
C3': (49.610,177.898,74.258)
O5': (48.083,175.537,74.766)
O4': (47.330,178.375,74.748)
C5': (47.743,176.287,73.600)
P: (47.130,174.386,75.297)
C4': (48.180,177.716,73.769)
C2': (49.434,178.168,75.744)
O2': (50.478,178.942,76.296)
N1: (47.398,178.885,77.021)
O4: (45.272,178.827,80.415)
O2: (46.997,181.133,76.948)
C6: (47.240,177.701,77.702)
C5: (46.563,177.615,78.848)
O3': (50.179,179.013,73.622)
N3: (46.172,179.932,78.684)
OP1: (45.734,174.734,74.932)
OP2: (47.697,173.082,74.861)
C2: (46.864,180.058,77.509)
C1': (48.131,178.954,75.752)
C3': (49.610,177.898,74.258)
O5': (48.083,175.537,74.766)
O4': (47.330,178.375,74.748)
C5': (47.743,176.287,73.600)
P: (47.130,174.386,75.297)
C4': (48.180,177.716,73.769)
C2': (49.434,178.168,75.744)
O2': (50.478,178.942,76.296)
N1: (47.398,178.885,77.021)
O4: (45.272,178.827,80.415)
O2: (46.997,181.133,76.948)
C6: (47.240,177.701,77.702)
C5: (46.563,177.615,78.848)
O3': (50.179,179.013,73.622)
Image (generated by PyMOL):