Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1232:A1278
Extra
PDB:
ATOM 1 O3' U A1231 -16.485 -87.217 4.887 1.00 30.20 O
ATOM 2 P G A1232 -16.808 -88.778 5.024 1.00 49.56 P
ATOM 3 OP1 G A1232 -16.219 -89.225 6.314 1.00 85.92 O
ATOM 4 OP2 G A1232 -16.418 -89.457 3.761 1.00 85.92 O
ATOM 5 O5' G A1232 -18.393 -88.806 5.152 1.00 32.04 O
ATOM 6 C5' G A1232 -19.035 -88.416 6.372 1.00 32.04 C
ATOM 7 C4' G A1232 -20.536 -88.441 6.210 1.00 32.04 C
ATOM 8 O4' G A1232 -20.912 -87.541 5.133 1.00 32.04 O
ATOM 9 C3' G A1232 -21.175 -89.766 5.813 1.00 32.04 C
ATOM 10 O3' G A1232 -21.371 -90.638 6.926 1.00 32.04 O
ATOM 11 C2' G A1232 -22.499 -89.322 5.193 1.00 32.04 C
ATOM 12 O2' G A1232 -23.483 -89.073 6.172 1.00 32.04 O
ATOM 13 C1' G A1232 -22.115 -87.997 4.532 1.00 32.04 C
ATOM 14 N9 G A1232 -21.919 -88.129 3.094 1.00 25.91 N
ATOM 15 C8 G A1232 -20.755 -88.422 2.435 1.00 25.91 C
ATOM 16 N7 G A1232 -20.918 -88.551 1.149 1.00 25.91 N
ATOM 17 C5 G A1232 -22.270 -88.305 0.946 1.00 25.91 C
ATOM 18 C6 G A1232 -23.050 -88.318 -0.252 1.00 25.91 C
ATOM 19 O6 G A1232 -22.694 -88.563 -1.411 1.00 25.91 O
ATOM 20 N1 G A1232 -24.375 -88.019 0.000 1.00 25.91 N
ATOM 21 C2 G A1232 -24.900 -87.755 1.228 1.00 25.91 C
ATOM 22 N2 G A1232 -26.221 -87.519 1.255 1.00 25.91 N
ATOM 23 N3 G A1232 -24.192 -87.735 2.348 1.00 25.91 N
ATOM 24 C4 G A1232 -22.895 -88.023 2.133 1.00 25.91 C
ATOM 25 P A A1233 -21.366 -92.240 6.700 1.00 31.00 P
ATOM 26 OP1 A A1233 -21.412 -92.871 8.045 1.00 41.26 O
ATOM 27 OP2 A A1233 -20.277 -92.607 5.744 1.00 41.26 O
ATOM 28 O5' A A1233 -22.761 -92.570 6.002 1.00 17.53 O
TER
ATOM 1 O3' G B1277 -29.643 -83.859 8.149 1.00 0.97 O
ATOM 2 P U B1278 -29.438 -84.191 9.701 1.00 29.20 P
ATOM 3 OP1 U B1278 -29.790 -85.621 9.917 1.00 47.94 O
ATOM 4 OP2 U B1278 -30.097 -83.152 10.511 1.00 47.94 O
ATOM 5 O5' U B1278 -27.873 -84.040 9.882 1.00 22.21 O
ATOM 6 C5' U B1278 -27.224 -82.801 9.614 1.00 22.21 C
ATOM 7 C4' U B1278 -25.745 -83.026 9.483 1.00 22.21 C
ATOM 8 O4' U B1278 -25.550 -84.142 8.595 1.00 22.21 O
ATOM 9 C3' U B1278 -24.977 -81.861 8.899 1.00 22.21 C
ATOM 10 O3' U B1278 -23.681 -81.859 9.470 1.00 22.21 O
ATOM 11 C2' U B1278 -24.913 -82.198 7.411 1.00 22.21 C
ATOM 12 O2' U B1278 -23.750 -81.693 6.771 1.00 22.21 O
ATOM 13 C1' U B1278 -24.884 -83.725 7.430 1.00 22.21 C
ATOM 14 N1 U B1278 -25.590 -84.337 6.302 1.00 20.86 N
ATOM 15 C2 U B1278 -24.846 -84.925 5.304 1.00 20.86 C
ATOM 16 O2 U B1278 -23.629 -84.914 5.282 1.00 20.86 O
ATOM 17 N3 U B1278 -25.581 -85.532 4.329 1.00 20.86 N
ATOM 18 C4 U B1278 -26.956 -85.607 4.257 1.00 20.86 C
ATOM 19 O4 U B1278 -27.485 -86.286 3.374 1.00 20.86 O
ATOM 20 C5 U B1278 -27.642 -84.944 5.312 1.00 20.86 C
ATOM 21 C6 U B1278 -26.952 -84.342 6.268 1.00 20.86 C
ATOM 22 P C B1279 -23.237 -80.654 10.432 1.00 14.50 P
ATOM 23 OP1 C B1279 -21.814 -80.312 10.127 1.00 52.97 O
ATOM 24 OP2 C B1279 -23.624 -81.036 11.810 1.00 52.97 O
ATOM 25 O5' C B1279 -24.157 -79.440 9.971 1.00 17.49 O
TER
ATOM 2 P G A1232 -16.808 -88.778 5.024 1.00 49.56 P
ATOM 3 OP1 G A1232 -16.219 -89.225 6.314 1.00 85.92 O
ATOM 4 OP2 G A1232 -16.418 -89.457 3.761 1.00 85.92 O
ATOM 5 O5' G A1232 -18.393 -88.806 5.152 1.00 32.04 O
ATOM 6 C5' G A1232 -19.035 -88.416 6.372 1.00 32.04 C
ATOM 7 C4' G A1232 -20.536 -88.441 6.210 1.00 32.04 C
ATOM 8 O4' G A1232 -20.912 -87.541 5.133 1.00 32.04 O
ATOM 9 C3' G A1232 -21.175 -89.766 5.813 1.00 32.04 C
ATOM 10 O3' G A1232 -21.371 -90.638 6.926 1.00 32.04 O
ATOM 11 C2' G A1232 -22.499 -89.322 5.193 1.00 32.04 C
ATOM 12 O2' G A1232 -23.483 -89.073 6.172 1.00 32.04 O
ATOM 13 C1' G A1232 -22.115 -87.997 4.532 1.00 32.04 C
ATOM 14 N9 G A1232 -21.919 -88.129 3.094 1.00 25.91 N
ATOM 15 C8 G A1232 -20.755 -88.422 2.435 1.00 25.91 C
ATOM 16 N7 G A1232 -20.918 -88.551 1.149 1.00 25.91 N
ATOM 17 C5 G A1232 -22.270 -88.305 0.946 1.00 25.91 C
ATOM 18 C6 G A1232 -23.050 -88.318 -0.252 1.00 25.91 C
ATOM 19 O6 G A1232 -22.694 -88.563 -1.411 1.00 25.91 O
ATOM 20 N1 G A1232 -24.375 -88.019 0.000 1.00 25.91 N
ATOM 21 C2 G A1232 -24.900 -87.755 1.228 1.00 25.91 C
ATOM 22 N2 G A1232 -26.221 -87.519 1.255 1.00 25.91 N
ATOM 23 N3 G A1232 -24.192 -87.735 2.348 1.00 25.91 N
ATOM 24 C4 G A1232 -22.895 -88.023 2.133 1.00 25.91 C
ATOM 25 P A A1233 -21.366 -92.240 6.700 1.00 31.00 P
ATOM 26 OP1 A A1233 -21.412 -92.871 8.045 1.00 41.26 O
ATOM 27 OP2 A A1233 -20.277 -92.607 5.744 1.00 41.26 O
ATOM 28 O5' A A1233 -22.761 -92.570 6.002 1.00 17.53 O
TER
ATOM 1 O3' G B1277 -29.643 -83.859 8.149 1.00 0.97 O
ATOM 2 P U B1278 -29.438 -84.191 9.701 1.00 29.20 P
ATOM 3 OP1 U B1278 -29.790 -85.621 9.917 1.00 47.94 O
ATOM 4 OP2 U B1278 -30.097 -83.152 10.511 1.00 47.94 O
ATOM 5 O5' U B1278 -27.873 -84.040 9.882 1.00 22.21 O
ATOM 6 C5' U B1278 -27.224 -82.801 9.614 1.00 22.21 C
ATOM 7 C4' U B1278 -25.745 -83.026 9.483 1.00 22.21 C
ATOM 8 O4' U B1278 -25.550 -84.142 8.595 1.00 22.21 O
ATOM 9 C3' U B1278 -24.977 -81.861 8.899 1.00 22.21 C
ATOM 10 O3' U B1278 -23.681 -81.859 9.470 1.00 22.21 O
ATOM 11 C2' U B1278 -24.913 -82.198 7.411 1.00 22.21 C
ATOM 12 O2' U B1278 -23.750 -81.693 6.771 1.00 22.21 O
ATOM 13 C1' U B1278 -24.884 -83.725 7.430 1.00 22.21 C
ATOM 14 N1 U B1278 -25.590 -84.337 6.302 1.00 20.86 N
ATOM 15 C2 U B1278 -24.846 -84.925 5.304 1.00 20.86 C
ATOM 16 O2 U B1278 -23.629 -84.914 5.282 1.00 20.86 O
ATOM 17 N3 U B1278 -25.581 -85.532 4.329 1.00 20.86 N
ATOM 18 C4 U B1278 -26.956 -85.607 4.257 1.00 20.86 C
ATOM 19 O4 U B1278 -27.485 -86.286 3.374 1.00 20.86 O
ATOM 20 C5 U B1278 -27.642 -84.944 5.312 1.00 20.86 C
ATOM 21 C6 U B1278 -26.952 -84.342 6.268 1.00 20.86 C
ATOM 22 P C B1279 -23.237 -80.654 10.432 1.00 14.50 P
ATOM 23 OP1 C B1279 -21.814 -80.312 10.127 1.00 52.97 O
ATOM 24 OP2 C B1279 -23.624 -81.036 11.810 1.00 52.97 O
ATOM 25 O5' C B1279 -24.157 -79.440 9.971 1.00 17.49 O
TER
Atoms:
OP1: (-16.219,-89.225,6.314)
OP2: (-16.418,-89.457,3.761)
C3': (-21.175,-89.766,5.813)
C1': (-22.115,-87.997,4.532)
C5': (-19.035,-88.416,6.372)
O6: (-22.694,-88.563,-1.411)
O4': (-20.912,-87.541,5.133)
C8: (-20.755,-88.422,2.435)
C2: (-24.900,-87.755,1.228)
C6: (-23.050,-88.318,-0.252)
C5: (-22.270,-88.305,0.946)
C4: (-22.895,-88.023,2.133)
P: (-16.808,-88.778,5.024)
C4': (-20.536,-88.441,6.210)
C2': (-22.499,-89.322,5.193)
O2': (-23.483,-89.073,6.172)
N1: (-24.375,-88.019,0.000)
N2: (-26.221,-87.519,1.255)
N3: (-24.192,-87.735,2.348)
N7: (-20.918,-88.551,1.149)
N9: (-21.919,-88.129,3.094)
O5': (-18.393,-88.806,5.152)
O3': (-21.371,-90.638,6.926)
OP2: (-16.418,-89.457,3.761)
C3': (-21.175,-89.766,5.813)
C1': (-22.115,-87.997,4.532)
C5': (-19.035,-88.416,6.372)
O6: (-22.694,-88.563,-1.411)
O4': (-20.912,-87.541,5.133)
C8: (-20.755,-88.422,2.435)
C2: (-24.900,-87.755,1.228)
C6: (-23.050,-88.318,-0.252)
C5: (-22.270,-88.305,0.946)
C4: (-22.895,-88.023,2.133)
P: (-16.808,-88.778,5.024)
C4': (-20.536,-88.441,6.210)
C2': (-22.499,-89.322,5.193)
O2': (-23.483,-89.073,6.172)
N1: (-24.375,-88.019,0.000)
N2: (-26.221,-87.519,1.255)
N3: (-24.192,-87.735,2.348)
N7: (-20.918,-88.551,1.149)
N9: (-21.919,-88.129,3.094)
O5': (-18.393,-88.806,5.152)
O3': (-21.371,-90.638,6.926)
C4: (-26.956,-85.607,4.257)
N3: (-25.581,-85.532,4.329)
OP1: (-29.790,-85.621,9.917)
OP2: (-30.097,-83.152,10.511)
C2: (-24.846,-84.925,5.304)
C1': (-24.884,-83.725,7.430)
C3': (-24.977,-81.861,8.899)
O5': (-27.873,-84.040,9.882)
O4': (-25.550,-84.142,8.595)
C5': (-27.224,-82.801,9.614)
P: (-29.438,-84.191,9.701)
C4': (-25.745,-83.026,9.483)
C2': (-24.913,-82.198,7.411)
O2': (-23.750,-81.693,6.771)
N1: (-25.590,-84.337,6.302)
O4: (-27.485,-86.286,3.374)
O2: (-23.629,-84.914,5.282)
C6: (-26.952,-84.342,6.268)
C5: (-27.642,-84.944,5.312)
O3': (-23.681,-81.859,9.470)
N3: (-25.581,-85.532,4.329)
OP1: (-29.790,-85.621,9.917)
OP2: (-30.097,-83.152,10.511)
C2: (-24.846,-84.925,5.304)
C1': (-24.884,-83.725,7.430)
C3': (-24.977,-81.861,8.899)
O5': (-27.873,-84.040,9.882)
O4': (-25.550,-84.142,8.595)
C5': (-27.224,-82.801,9.614)
P: (-29.438,-84.191,9.701)
C4': (-25.745,-83.026,9.483)
C2': (-24.913,-82.198,7.411)
O2': (-23.750,-81.693,6.771)
N1: (-25.590,-84.337,6.302)
O4: (-27.485,-86.286,3.374)
O2: (-23.629,-84.914,5.282)
C6: (-26.952,-84.342,6.268)
C5: (-27.642,-84.944,5.312)
O3': (-23.681,-81.859,9.470)
Image (generated by PyMOL):