Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1238:A1284
Extra
PDB:
ATOM 1 O3' U A1237 16.866 -86.240 -5.376 1.00 50.50 O
ATOM 2 P G A1238 16.995 -87.849 -5.400 1.00 54.35 P
ATOM 3 OP1 G A1238 16.145 -88.357 -6.518 1.00 51.20 O
ATOM 4 OP2 G A1238 16.787 -88.363 -4.016 1.00 50.71 O
ATOM 5 O5' G A1238 18.526 -88.153 -5.737 1.00 51.43 O
ATOM 6 C5' G A1238 19.074 -87.859 -7.016 1.00 50.08 C
ATOM 7 C4' G A1238 20.572 -87.828 -6.937 1.00 47.65 C
ATOM 8 O4' G A1238 20.947 -86.909 -5.878 1.00 53.13 O
ATOM 9 C3' G A1238 21.233 -89.130 -6.525 1.00 53.92 C
ATOM 10 O3' G A1238 21.415 -90.041 -7.597 1.00 61.14 O
ATOM 11 C2' G A1238 22.551 -88.647 -5.941 1.00 53.78 C
ATOM 12 O2' G A1238 23.472 -88.279 -6.948 1.00 55.61 O
ATOM 13 C1' G A1238 22.096 -87.396 -5.197 1.00 52.59 C
ATOM 14 N9 G A1238 21.715 -87.760 -3.834 1.00 49.75 N
ATOM 15 C8 G A1238 20.546 -88.365 -3.451 1.00 54.18 C
ATOM 16 N7 G A1238 20.518 -88.675 -2.186 1.00 55.94 N
ATOM 17 C5 G A1238 21.735 -88.233 -1.700 1.00 53.66 C
ATOM 18 C6 G A1238 22.287 -88.334 -0.404 1.00 56.98 C
ATOM 19 O6 G A1238 21.816 -88.902 0.591 1.00 56.69 O
ATOM 20 N1 G A1238 23.532 -87.722 -0.328 1.00 58.84 N
ATOM 21 C2 G A1238 24.179 -87.118 -1.378 1.00 60.78 C
ATOM 22 N2 G A1238 25.380 -86.561 -1.099 1.00 55.42 N
ATOM 23 N3 G A1238 23.689 -87.058 -2.609 1.00 60.85 N
ATOM 24 C4 G A1238 22.471 -87.630 -2.695 1.00 54.59 C
ATOM 25 P A A1239 21.426 -91.624 -7.289 1.00 62.27 P
ATOM 26 OP1 A A1239 21.808 -92.338 -8.542 1.00 56.09 O
ATOM 27 OP2 A A1239 20.145 -91.951 -6.613 1.00 50.68 O
ATOM 28 O5' A A1239 22.578 -91.814 -6.192 1.00 57.12 O
TER
ATOM 1 O3' G B1283 29.452 -83.018 -8.494 1.00 50.29 O
ATOM 2 P U B1284 28.963 -83.115 -10.018 1.00 58.52 P
ATOM 3 OP1 U B1284 28.803 -84.583 -10.311 1.00 38.06 O
ATOM 4 OP2 U B1284 29.836 -82.263 -10.894 1.00 44.11 O
ATOM 5 O5' U B1284 27.549 -82.383 -9.939 1.00 54.76 O
ATOM 6 C5' U B1284 26.420 -82.838 -10.676 1.00 50.51 C
ATOM 7 C4' U B1284 25.154 -82.521 -9.915 1.00 49.02 C
ATOM 8 O4' U B1284 25.066 -83.378 -8.752 1.00 46.71 O
ATOM 9 C3' U B1284 25.008 -81.085 -9.416 1.00 42.46 C
ATOM 10 O3' U B1284 23.668 -80.652 -9.623 1.00 39.39 O
ATOM 11 C2' U B1284 25.360 -81.190 -7.932 1.00 42.16 C
ATOM 12 O2' U B1284 24.663 -80.250 -7.149 1.00 52.17 O
ATOM 13 C1' U B1284 24.883 -82.603 -7.593 1.00 48.43 C
ATOM 14 N1 U B1284 25.562 -83.294 -6.486 1.00 55.06 N
ATOM 15 C2 U B1284 24.794 -84.151 -5.702 1.00 55.80 C
ATOM 16 O2 U B1284 23.602 -84.327 -5.868 1.00 53.70 O
ATOM 17 N3 U B1284 25.480 -84.796 -4.707 1.00 62.44 N
ATOM 18 C4 U B1284 26.812 -84.671 -4.403 1.00 61.90 C
ATOM 19 O4 U B1284 27.250 -85.239 -3.402 1.00 62.72 O
ATOM 20 C5 U B1284 27.539 -83.769 -5.249 1.00 59.12 C
ATOM 21 C6 U B1284 26.905 -83.126 -6.234 1.00 58.08 C
ATOM 22 P C B1285 23.327 -79.680 -10.869 1.00 44.84 P
ATOM 23 OP1 C B1285 21.863 -79.528 -11.025 1.00 40.04 O
ATOM 24 OP2 C B1285 24.138 -80.065 -12.056 1.00 43.06 O
ATOM 25 O5' C B1285 23.913 -78.288 -10.380 1.00 41.45 O
TER
ATOM 2 P G A1238 16.995 -87.849 -5.400 1.00 54.35 P
ATOM 3 OP1 G A1238 16.145 -88.357 -6.518 1.00 51.20 O
ATOM 4 OP2 G A1238 16.787 -88.363 -4.016 1.00 50.71 O
ATOM 5 O5' G A1238 18.526 -88.153 -5.737 1.00 51.43 O
ATOM 6 C5' G A1238 19.074 -87.859 -7.016 1.00 50.08 C
ATOM 7 C4' G A1238 20.572 -87.828 -6.937 1.00 47.65 C
ATOM 8 O4' G A1238 20.947 -86.909 -5.878 1.00 53.13 O
ATOM 9 C3' G A1238 21.233 -89.130 -6.525 1.00 53.92 C
ATOM 10 O3' G A1238 21.415 -90.041 -7.597 1.00 61.14 O
ATOM 11 C2' G A1238 22.551 -88.647 -5.941 1.00 53.78 C
ATOM 12 O2' G A1238 23.472 -88.279 -6.948 1.00 55.61 O
ATOM 13 C1' G A1238 22.096 -87.396 -5.197 1.00 52.59 C
ATOM 14 N9 G A1238 21.715 -87.760 -3.834 1.00 49.75 N
ATOM 15 C8 G A1238 20.546 -88.365 -3.451 1.00 54.18 C
ATOM 16 N7 G A1238 20.518 -88.675 -2.186 1.00 55.94 N
ATOM 17 C5 G A1238 21.735 -88.233 -1.700 1.00 53.66 C
ATOM 18 C6 G A1238 22.287 -88.334 -0.404 1.00 56.98 C
ATOM 19 O6 G A1238 21.816 -88.902 0.591 1.00 56.69 O
ATOM 20 N1 G A1238 23.532 -87.722 -0.328 1.00 58.84 N
ATOM 21 C2 G A1238 24.179 -87.118 -1.378 1.00 60.78 C
ATOM 22 N2 G A1238 25.380 -86.561 -1.099 1.00 55.42 N
ATOM 23 N3 G A1238 23.689 -87.058 -2.609 1.00 60.85 N
ATOM 24 C4 G A1238 22.471 -87.630 -2.695 1.00 54.59 C
ATOM 25 P A A1239 21.426 -91.624 -7.289 1.00 62.27 P
ATOM 26 OP1 A A1239 21.808 -92.338 -8.542 1.00 56.09 O
ATOM 27 OP2 A A1239 20.145 -91.951 -6.613 1.00 50.68 O
ATOM 28 O5' A A1239 22.578 -91.814 -6.192 1.00 57.12 O
TER
ATOM 1 O3' G B1283 29.452 -83.018 -8.494 1.00 50.29 O
ATOM 2 P U B1284 28.963 -83.115 -10.018 1.00 58.52 P
ATOM 3 OP1 U B1284 28.803 -84.583 -10.311 1.00 38.06 O
ATOM 4 OP2 U B1284 29.836 -82.263 -10.894 1.00 44.11 O
ATOM 5 O5' U B1284 27.549 -82.383 -9.939 1.00 54.76 O
ATOM 6 C5' U B1284 26.420 -82.838 -10.676 1.00 50.51 C
ATOM 7 C4' U B1284 25.154 -82.521 -9.915 1.00 49.02 C
ATOM 8 O4' U B1284 25.066 -83.378 -8.752 1.00 46.71 O
ATOM 9 C3' U B1284 25.008 -81.085 -9.416 1.00 42.46 C
ATOM 10 O3' U B1284 23.668 -80.652 -9.623 1.00 39.39 O
ATOM 11 C2' U B1284 25.360 -81.190 -7.932 1.00 42.16 C
ATOM 12 O2' U B1284 24.663 -80.250 -7.149 1.00 52.17 O
ATOM 13 C1' U B1284 24.883 -82.603 -7.593 1.00 48.43 C
ATOM 14 N1 U B1284 25.562 -83.294 -6.486 1.00 55.06 N
ATOM 15 C2 U B1284 24.794 -84.151 -5.702 1.00 55.80 C
ATOM 16 O2 U B1284 23.602 -84.327 -5.868 1.00 53.70 O
ATOM 17 N3 U B1284 25.480 -84.796 -4.707 1.00 62.44 N
ATOM 18 C4 U B1284 26.812 -84.671 -4.403 1.00 61.90 C
ATOM 19 O4 U B1284 27.250 -85.239 -3.402 1.00 62.72 O
ATOM 20 C5 U B1284 27.539 -83.769 -5.249 1.00 59.12 C
ATOM 21 C6 U B1284 26.905 -83.126 -6.234 1.00 58.08 C
ATOM 22 P C B1285 23.327 -79.680 -10.869 1.00 44.84 P
ATOM 23 OP1 C B1285 21.863 -79.528 -11.025 1.00 40.04 O
ATOM 24 OP2 C B1285 24.138 -80.065 -12.056 1.00 43.06 O
ATOM 25 O5' C B1285 23.913 -78.288 -10.380 1.00 41.45 O
TER
Atoms:
OP1: (16.145,-88.357,-6.518)
OP2: (16.787,-88.363,-4.016)
C3': (21.233,-89.130,-6.525)
C1': (22.096,-87.396,-5.197)
C5': (19.074,-87.859,-7.016)
O6: (21.816,-88.902,0.591)
O4': (20.947,-86.909,-5.878)
C8: (20.546,-88.365,-3.451)
C2: (24.179,-87.118,-1.378)
C6: (22.287,-88.334,-0.404)
C5: (21.735,-88.233,-1.700)
C4: (22.471,-87.630,-2.695)
P: (16.995,-87.849,-5.400)
C4': (20.572,-87.828,-6.937)
C2': (22.551,-88.647,-5.941)
O2': (23.472,-88.279,-6.948)
N1: (23.532,-87.722,-0.328)
N2: (25.380,-86.561,-1.099)
N3: (23.689,-87.058,-2.609)
N7: (20.518,-88.675,-2.186)
N9: (21.715,-87.760,-3.834)
O5': (18.526,-88.153,-5.737)
O3': (21.415,-90.041,-7.597)
OP2: (16.787,-88.363,-4.016)
C3': (21.233,-89.130,-6.525)
C1': (22.096,-87.396,-5.197)
C5': (19.074,-87.859,-7.016)
O6: (21.816,-88.902,0.591)
O4': (20.947,-86.909,-5.878)
C8: (20.546,-88.365,-3.451)
C2: (24.179,-87.118,-1.378)
C6: (22.287,-88.334,-0.404)
C5: (21.735,-88.233,-1.700)
C4: (22.471,-87.630,-2.695)
P: (16.995,-87.849,-5.400)
C4': (20.572,-87.828,-6.937)
C2': (22.551,-88.647,-5.941)
O2': (23.472,-88.279,-6.948)
N1: (23.532,-87.722,-0.328)
N2: (25.380,-86.561,-1.099)
N3: (23.689,-87.058,-2.609)
N7: (20.518,-88.675,-2.186)
N9: (21.715,-87.760,-3.834)
O5': (18.526,-88.153,-5.737)
O3': (21.415,-90.041,-7.597)
C4: (26.812,-84.671,-4.403)
N3: (25.480,-84.796,-4.707)
OP1: (28.803,-84.583,-10.311)
OP2: (29.836,-82.263,-10.894)
C2: (24.794,-84.151,-5.702)
C1': (24.883,-82.603,-7.593)
C3': (25.008,-81.085,-9.416)
O5': (27.549,-82.383,-9.939)
O4': (25.066,-83.378,-8.752)
C5': (26.420,-82.838,-10.676)
P: (28.963,-83.115,-10.018)
C4': (25.154,-82.521,-9.915)
C2': (25.360,-81.190,-7.932)
O2': (24.663,-80.250,-7.149)
N1: (25.562,-83.294,-6.486)
O4: (27.250,-85.239,-3.402)
O2: (23.602,-84.327,-5.868)
C6: (26.905,-83.126,-6.234)
C5: (27.539,-83.769,-5.249)
O3': (23.668,-80.652,-9.623)
N3: (25.480,-84.796,-4.707)
OP1: (28.803,-84.583,-10.311)
OP2: (29.836,-82.263,-10.894)
C2: (24.794,-84.151,-5.702)
C1': (24.883,-82.603,-7.593)
C3': (25.008,-81.085,-9.416)
O5': (27.549,-82.383,-9.939)
O4': (25.066,-83.378,-8.752)
C5': (26.420,-82.838,-10.676)
P: (28.963,-83.115,-10.018)
C4': (25.154,-82.521,-9.915)
C2': (25.360,-81.190,-7.932)
O2': (24.663,-80.250,-7.149)
N1: (25.562,-83.294,-6.486)
O4: (27.250,-85.239,-3.402)
O2: (23.602,-84.327,-5.868)
C6: (26.905,-83.126,-6.234)
C5: (27.539,-83.769,-5.249)
O3': (23.668,-80.652,-9.623)
Image (generated by PyMOL):