Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1232:A1278
Extra
PDB:
ATOM 1 O3' U A1231 17.803 -85.992 -4.802 1.00 66.13 O
ATOM 2 P G A1232 17.671 -87.575 -4.766 1.00 45.51 P
ATOM 3 OP1 G A1232 16.738 -87.958 -5.857 1.00 66.69 O
ATOM 4 OP2 G A1232 17.345 -87.968 -3.356 1.00 63.35 O
ATOM 5 O5' G A1232 19.130 -88.052 -5.122 1.00 53.02 O
ATOM 6 C5' G A1232 19.778 -87.588 -6.283 1.00 46.79 C
ATOM 7 C4' G A1232 21.263 -87.506 -6.079 1.00 45.37 C
ATOM 8 O4' G A1232 21.577 -86.594 -4.990 1.00 51.90 O
ATOM 9 C3' G A1232 21.961 -88.784 -5.670 1.00 38.95 C
ATOM 10 O3' G A1232 22.122 -89.686 -6.744 1.00 42.51 O
ATOM 11 C2' G A1232 23.270 -88.237 -5.147 1.00 40.96 C
ATOM 12 O2' G A1232 24.065 -87.792 -6.238 1.00 48.63 O
ATOM 13 C1' G A1232 22.782 -87.001 -4.382 1.00 43.99 C
ATOM 14 N9 G A1232 22.530 -87.292 -2.955 1.00 41.97 N
ATOM 15 C8 G A1232 21.364 -87.679 -2.365 1.00 48.68 C
ATOM 16 N7 G A1232 21.467 -87.883 -1.082 1.00 54.76 N
ATOM 17 C5 G A1232 22.793 -87.613 -0.789 1.00 49.19 C
ATOM 18 C6 G A1232 23.509 -87.666 0.442 1.00 47.73 C
ATOM 19 O6 G A1232 23.117 -87.972 1.573 1.00 52.50 O
ATOM 20 N1 G A1232 24.841 -87.319 0.291 1.00 49.55 N
ATOM 21 C2 G A1232 25.412 -86.973 -0.895 1.00 50.02 C
ATOM 22 N2 G A1232 26.710 -86.679 -0.834 1.00 49.89 N
ATOM 23 N3 G A1232 24.765 -86.924 -2.050 1.00 55.74 N
ATOM 24 C4 G A1232 23.457 -87.251 -1.934 1.00 51.01 C
ATOM 25 P A A1233 21.973 -91.265 -6.507 1.00 50.63 P
ATOM 26 OP1 A A1233 21.695 -91.884 -7.821 1.00 54.12 O
ATOM 27 OP2 A A1233 20.996 -91.442 -5.410 1.00 50.51 O
ATOM 28 O5' A A1233 23.420 -91.702 -6.009 1.00 42.91 O
TER
ATOM 1 O3' G B1277 30.529 -83.018 -7.876 1.00 40.14 O
ATOM 2 P U B1278 29.859 -82.992 -9.316 1.00 35.50 P
ATOM 3 OP1 U B1278 30.005 -84.356 -9.892 1.00 28.18 O
ATOM 4 OP2 U B1278 30.435 -81.837 -10.036 1.00 34.22 O
ATOM 5 O5' U B1278 28.342 -82.711 -8.970 1.00 31.51 O
ATOM 6 C5' U B1278 27.394 -82.436 -9.985 1.00 32.41 C
ATOM 7 C4' U B1278 26.013 -82.257 -9.404 1.00 30.35 C
ATOM 8 O4' U B1278 25.831 -83.211 -8.330 1.00 28.95 O
ATOM 9 C3' U B1278 25.748 -80.900 -8.789 1.00 29.05 C
ATOM 10 O3' U B1278 24.367 -80.604 -8.906 1.00 26.56 O
ATOM 11 C2' U B1278 26.114 -81.127 -7.332 1.00 28.07 C
ATOM 12 O2' U B1278 25.548 -80.213 -6.431 1.00 37.65 O
ATOM 13 C1' U B1278 25.605 -82.537 -7.115 1.00 24.66 C
ATOM 14 N1 U B1278 26.310 -83.278 -6.069 1.00 29.75 N
ATOM 15 C2 U B1278 25.540 -83.985 -5.196 1.00 33.56 C
ATOM 16 O2 U B1278 24.349 -83.949 -5.287 1.00 45.94 O
ATOM 17 N3 U B1278 26.181 -84.716 -4.235 1.00 38.63 N
ATOM 18 C4 U B1278 27.541 -84.803 -4.088 1.00 39.37 C
ATOM 19 O4 U B1278 27.988 -85.474 -3.173 1.00 38.45 O
ATOM 20 C5 U B1278 28.304 -84.061 -5.055 1.00 40.90 C
ATOM 21 C6 U B1278 27.683 -83.347 -6.006 1.00 39.06 C
ATOM 22 P C B1279 23.856 -79.589 -10.036 1.00 40.83 P
ATOM 23 OP1 C B1279 22.396 -79.404 -9.816 1.00 58.52 O
ATOM 24 OP2 C B1279 24.335 -80.088 -11.364 1.00 29.76 O
ATOM 25 O5' C B1279 24.617 -78.260 -9.660 1.00 35.86 O
TER
ATOM 2 P G A1232 17.671 -87.575 -4.766 1.00 45.51 P
ATOM 3 OP1 G A1232 16.738 -87.958 -5.857 1.00 66.69 O
ATOM 4 OP2 G A1232 17.345 -87.968 -3.356 1.00 63.35 O
ATOM 5 O5' G A1232 19.130 -88.052 -5.122 1.00 53.02 O
ATOM 6 C5' G A1232 19.778 -87.588 -6.283 1.00 46.79 C
ATOM 7 C4' G A1232 21.263 -87.506 -6.079 1.00 45.37 C
ATOM 8 O4' G A1232 21.577 -86.594 -4.990 1.00 51.90 O
ATOM 9 C3' G A1232 21.961 -88.784 -5.670 1.00 38.95 C
ATOM 10 O3' G A1232 22.122 -89.686 -6.744 1.00 42.51 O
ATOM 11 C2' G A1232 23.270 -88.237 -5.147 1.00 40.96 C
ATOM 12 O2' G A1232 24.065 -87.792 -6.238 1.00 48.63 O
ATOM 13 C1' G A1232 22.782 -87.001 -4.382 1.00 43.99 C
ATOM 14 N9 G A1232 22.530 -87.292 -2.955 1.00 41.97 N
ATOM 15 C8 G A1232 21.364 -87.679 -2.365 1.00 48.68 C
ATOM 16 N7 G A1232 21.467 -87.883 -1.082 1.00 54.76 N
ATOM 17 C5 G A1232 22.793 -87.613 -0.789 1.00 49.19 C
ATOM 18 C6 G A1232 23.509 -87.666 0.442 1.00 47.73 C
ATOM 19 O6 G A1232 23.117 -87.972 1.573 1.00 52.50 O
ATOM 20 N1 G A1232 24.841 -87.319 0.291 1.00 49.55 N
ATOM 21 C2 G A1232 25.412 -86.973 -0.895 1.00 50.02 C
ATOM 22 N2 G A1232 26.710 -86.679 -0.834 1.00 49.89 N
ATOM 23 N3 G A1232 24.765 -86.924 -2.050 1.00 55.74 N
ATOM 24 C4 G A1232 23.457 -87.251 -1.934 1.00 51.01 C
ATOM 25 P A A1233 21.973 -91.265 -6.507 1.00 50.63 P
ATOM 26 OP1 A A1233 21.695 -91.884 -7.821 1.00 54.12 O
ATOM 27 OP2 A A1233 20.996 -91.442 -5.410 1.00 50.51 O
ATOM 28 O5' A A1233 23.420 -91.702 -6.009 1.00 42.91 O
TER
ATOM 1 O3' G B1277 30.529 -83.018 -7.876 1.00 40.14 O
ATOM 2 P U B1278 29.859 -82.992 -9.316 1.00 35.50 P
ATOM 3 OP1 U B1278 30.005 -84.356 -9.892 1.00 28.18 O
ATOM 4 OP2 U B1278 30.435 -81.837 -10.036 1.00 34.22 O
ATOM 5 O5' U B1278 28.342 -82.711 -8.970 1.00 31.51 O
ATOM 6 C5' U B1278 27.394 -82.436 -9.985 1.00 32.41 C
ATOM 7 C4' U B1278 26.013 -82.257 -9.404 1.00 30.35 C
ATOM 8 O4' U B1278 25.831 -83.211 -8.330 1.00 28.95 O
ATOM 9 C3' U B1278 25.748 -80.900 -8.789 1.00 29.05 C
ATOM 10 O3' U B1278 24.367 -80.604 -8.906 1.00 26.56 O
ATOM 11 C2' U B1278 26.114 -81.127 -7.332 1.00 28.07 C
ATOM 12 O2' U B1278 25.548 -80.213 -6.431 1.00 37.65 O
ATOM 13 C1' U B1278 25.605 -82.537 -7.115 1.00 24.66 C
ATOM 14 N1 U B1278 26.310 -83.278 -6.069 1.00 29.75 N
ATOM 15 C2 U B1278 25.540 -83.985 -5.196 1.00 33.56 C
ATOM 16 O2 U B1278 24.349 -83.949 -5.287 1.00 45.94 O
ATOM 17 N3 U B1278 26.181 -84.716 -4.235 1.00 38.63 N
ATOM 18 C4 U B1278 27.541 -84.803 -4.088 1.00 39.37 C
ATOM 19 O4 U B1278 27.988 -85.474 -3.173 1.00 38.45 O
ATOM 20 C5 U B1278 28.304 -84.061 -5.055 1.00 40.90 C
ATOM 21 C6 U B1278 27.683 -83.347 -6.006 1.00 39.06 C
ATOM 22 P C B1279 23.856 -79.589 -10.036 1.00 40.83 P
ATOM 23 OP1 C B1279 22.396 -79.404 -9.816 1.00 58.52 O
ATOM 24 OP2 C B1279 24.335 -80.088 -11.364 1.00 29.76 O
ATOM 25 O5' C B1279 24.617 -78.260 -9.660 1.00 35.86 O
TER
Atoms:
OP1: (16.738,-87.958,-5.857)
OP2: (17.345,-87.968,-3.356)
C3': (21.961,-88.784,-5.670)
C1': (22.782,-87.001,-4.382)
C5': (19.778,-87.588,-6.283)
O6: (23.117,-87.972,1.573)
O4': (21.577,-86.594,-4.990)
C8: (21.364,-87.679,-2.365)
C2: (25.412,-86.973,-0.895)
C6: (23.509,-87.666,0.442)
C5: (22.793,-87.613,-0.789)
C4: (23.457,-87.251,-1.934)
P: (17.671,-87.575,-4.766)
C4': (21.263,-87.506,-6.079)
C2': (23.270,-88.237,-5.147)
O2': (24.065,-87.792,-6.238)
N1: (24.841,-87.319,0.291)
N2: (26.710,-86.679,-0.834)
N3: (24.765,-86.924,-2.050)
N7: (21.467,-87.883,-1.082)
N9: (22.530,-87.292,-2.955)
O5': (19.130,-88.052,-5.122)
O3': (22.122,-89.686,-6.744)
OP2: (17.345,-87.968,-3.356)
C3': (21.961,-88.784,-5.670)
C1': (22.782,-87.001,-4.382)
C5': (19.778,-87.588,-6.283)
O6: (23.117,-87.972,1.573)
O4': (21.577,-86.594,-4.990)
C8: (21.364,-87.679,-2.365)
C2: (25.412,-86.973,-0.895)
C6: (23.509,-87.666,0.442)
C5: (22.793,-87.613,-0.789)
C4: (23.457,-87.251,-1.934)
P: (17.671,-87.575,-4.766)
C4': (21.263,-87.506,-6.079)
C2': (23.270,-88.237,-5.147)
O2': (24.065,-87.792,-6.238)
N1: (24.841,-87.319,0.291)
N2: (26.710,-86.679,-0.834)
N3: (24.765,-86.924,-2.050)
N7: (21.467,-87.883,-1.082)
N9: (22.530,-87.292,-2.955)
O5': (19.130,-88.052,-5.122)
O3': (22.122,-89.686,-6.744)
C4: (27.541,-84.803,-4.088)
N3: (26.181,-84.716,-4.235)
OP1: (30.005,-84.356,-9.892)
OP2: (30.435,-81.837,-10.036)
C2: (25.540,-83.985,-5.196)
C1': (25.605,-82.537,-7.115)
C3': (25.748,-80.900,-8.789)
O5': (28.342,-82.711,-8.970)
O4': (25.831,-83.211,-8.330)
C5': (27.394,-82.436,-9.985)
P: (29.859,-82.992,-9.316)
C4': (26.013,-82.257,-9.404)
C2': (26.114,-81.127,-7.332)
O2': (25.548,-80.213,-6.431)
N1: (26.310,-83.278,-6.069)
O4: (27.988,-85.474,-3.173)
O2: (24.349,-83.949,-5.287)
C6: (27.683,-83.347,-6.006)
C5: (28.304,-84.061,-5.055)
O3': (24.367,-80.604,-8.906)
N3: (26.181,-84.716,-4.235)
OP1: (30.005,-84.356,-9.892)
OP2: (30.435,-81.837,-10.036)
C2: (25.540,-83.985,-5.196)
C1': (25.605,-82.537,-7.115)
C3': (25.748,-80.900,-8.789)
O5': (28.342,-82.711,-8.970)
O4': (25.831,-83.211,-8.330)
C5': (27.394,-82.436,-9.985)
P: (29.859,-82.992,-9.316)
C4': (26.013,-82.257,-9.404)
C2': (26.114,-81.127,-7.332)
O2': (25.548,-80.213,-6.431)
N1: (26.310,-83.278,-6.069)
O4: (27.988,-85.474,-3.173)
O2: (24.349,-83.949,-5.287)
C6: (27.683,-83.347,-6.006)
C5: (28.304,-84.061,-5.055)
O3': (24.367,-80.604,-8.906)
Image (generated by PyMOL):