Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A360:A47
Extra
PDB:
ATOM 1 O3' G A 359 -76.875 -5.138 -55.399 1.00 14.95 O
ATOM 2 P G A 360 -78.444 -4.930 -55.436 1.00 14.80 P
ATOM 3 OP1 G A 360 -78.960 -5.306 -54.108 1.00 14.80 O
ATOM 4 OP2 G A 360 -78.944 -5.647 -56.640 1.00 14.80 O
ATOM 5 O5' G A 360 -78.565 -3.362 -55.643 1.00 14.80 O
ATOM 6 C5' G A 360 -77.633 -2.485 -55.025 1.00 14.80 C
ATOM 7 C4' G A 360 -77.546 -1.167 -55.743 1.00 14.80 C
ATOM 8 O4' G A 360 -76.780 -1.324 -56.963 1.00 14.80 O
ATOM 9 C3' G A 360 -78.856 -0.574 -56.226 1.00 14.80 C
ATOM 10 O3' G A 360 -79.610 0.056 -55.214 1.00 14.80 O
ATOM 11 C2' G A 360 -78.387 0.378 -57.290 1.00 14.80 C
ATOM 12 O2' G A 360 -77.820 1.534 -56.697 1.00 14.80 O
ATOM 13 C1' G A 360 -77.284 -0.451 -57.944 1.00 14.80 C
ATOM 14 N9 G A 360 -77.842 -1.249 -59.019 1.00 15.12 N
ATOM 15 C8 G A 360 -78.503 -2.429 -58.835 1.00 15.12 C
ATOM 16 N7 G A 360 -78.982 -2.911 -59.947 1.00 15.12 N
ATOM 17 C5 G A 360 -78.638 -1.953 -60.883 1.00 15.12 C
ATOM 18 C6 G A 360 -78.913 -1.930 -62.245 1.00 15.12 C
ATOM 19 O6 G A 360 -79.515 -2.790 -62.882 1.00 15.12 O
ATOM 20 N1 G A 360 -78.407 -0.799 -62.861 1.00 15.12 N
ATOM 21 C2 G A 360 -77.725 0.198 -62.228 1.00 15.12 C
ATOM 22 N2 G A 360 -77.327 1.199 -63.035 1.00 15.12 N
ATOM 23 N3 G A 360 -77.473 0.201 -60.934 1.00 15.12 N
ATOM 24 C4 G A 360 -77.950 -0.905 -60.337 1.00 15.12 C
ATOM 25 P A A 361 -81.206 0.010 -55.310 1.00 11.51 P
ATOM 26 OP1 A A 361 -81.742 0.197 -53.936 1.00 11.51 O
ATOM 27 OP2 A A 361 -81.537 -1.233 -56.036 1.00 11.51 O
ATOM 28 O5' A A 361 -81.569 1.273 -56.228 1.00 11.50 O
TER
ATOM 1 O3' C B 46 -69.226 6.202 -58.910 1.00 24.40 O
ATOM 2 P U B 47 -68.404 4.985 -58.307 1.00 19.02 P
ATOM 3 OP1 U B 47 -67.553 5.552 -57.198 1.00 19.02 O
ATOM 4 OP2 U B 47 -67.744 4.278 -59.465 1.00 19.02 O
ATOM 5 O5' U B 47 -69.552 4.063 -57.694 1.00 19.02 O
ATOM 6 C5' U B 47 -69.591 3.794 -56.299 1.00 19.02 C
ATOM 7 C4' U B 47 -70.361 2.541 -56.000 1.00 19.02 C
ATOM 8 O4' U B 47 -71.660 2.622 -56.626 1.00 19.02 O
ATOM 9 C3' U B 47 -69.736 1.243 -56.509 1.00 19.02 C
ATOM 10 O3' U B 47 -69.987 0.215 -55.576 1.00 19.02 O
ATOM 11 C2' U B 47 -70.528 0.953 -57.765 1.00 19.02 C
ATOM 12 O2' U B 47 -70.559 -0.409 -58.135 1.00 19.02 O
ATOM 13 C1' U B 47 -71.892 1.441 -57.350 1.00 19.02 C
ATOM 14 N1 U B 47 -72.761 1.748 -58.458 1.00 18.30 N
ATOM 15 C2 U B 47 -73.839 0.924 -58.589 1.00 18.30 C
ATOM 16 O2 U B 47 -74.034 0.000 -57.814 1.00 18.30 O
ATOM 17 N3 U B 47 -74.638 1.241 -59.657 1.00 18.30 N
ATOM 18 C4 U B 47 -74.444 2.262 -60.565 1.00 18.30 C
ATOM 19 O4 U B 47 -75.234 2.435 -61.486 1.00 18.30 O
ATOM 20 C5 U B 47 -73.287 3.057 -60.338 1.00 18.30 C
ATOM 21 C6 U B 47 -72.493 2.777 -59.307 1.00 18.30 C
ATOM 22 P A B 48 -68.775 -0.448 -54.796 1.00 30.15 P
ATOM 23 OP1 A B 48 -69.352 -1.107 -53.592 1.00 30.15 O
ATOM 24 OP2 A B 48 -67.741 0.603 -54.618 1.00 30.15 O
ATOM 25 O5' A B 48 -68.255 -1.538 -55.825 1.00 30.15 O
TER
ATOM 2 P G A 360 -78.444 -4.930 -55.436 1.00 14.80 P
ATOM 3 OP1 G A 360 -78.960 -5.306 -54.108 1.00 14.80 O
ATOM 4 OP2 G A 360 -78.944 -5.647 -56.640 1.00 14.80 O
ATOM 5 O5' G A 360 -78.565 -3.362 -55.643 1.00 14.80 O
ATOM 6 C5' G A 360 -77.633 -2.485 -55.025 1.00 14.80 C
ATOM 7 C4' G A 360 -77.546 -1.167 -55.743 1.00 14.80 C
ATOM 8 O4' G A 360 -76.780 -1.324 -56.963 1.00 14.80 O
ATOM 9 C3' G A 360 -78.856 -0.574 -56.226 1.00 14.80 C
ATOM 10 O3' G A 360 -79.610 0.056 -55.214 1.00 14.80 O
ATOM 11 C2' G A 360 -78.387 0.378 -57.290 1.00 14.80 C
ATOM 12 O2' G A 360 -77.820 1.534 -56.697 1.00 14.80 O
ATOM 13 C1' G A 360 -77.284 -0.451 -57.944 1.00 14.80 C
ATOM 14 N9 G A 360 -77.842 -1.249 -59.019 1.00 15.12 N
ATOM 15 C8 G A 360 -78.503 -2.429 -58.835 1.00 15.12 C
ATOM 16 N7 G A 360 -78.982 -2.911 -59.947 1.00 15.12 N
ATOM 17 C5 G A 360 -78.638 -1.953 -60.883 1.00 15.12 C
ATOM 18 C6 G A 360 -78.913 -1.930 -62.245 1.00 15.12 C
ATOM 19 O6 G A 360 -79.515 -2.790 -62.882 1.00 15.12 O
ATOM 20 N1 G A 360 -78.407 -0.799 -62.861 1.00 15.12 N
ATOM 21 C2 G A 360 -77.725 0.198 -62.228 1.00 15.12 C
ATOM 22 N2 G A 360 -77.327 1.199 -63.035 1.00 15.12 N
ATOM 23 N3 G A 360 -77.473 0.201 -60.934 1.00 15.12 N
ATOM 24 C4 G A 360 -77.950 -0.905 -60.337 1.00 15.12 C
ATOM 25 P A A 361 -81.206 0.010 -55.310 1.00 11.51 P
ATOM 26 OP1 A A 361 -81.742 0.197 -53.936 1.00 11.51 O
ATOM 27 OP2 A A 361 -81.537 -1.233 -56.036 1.00 11.51 O
ATOM 28 O5' A A 361 -81.569 1.273 -56.228 1.00 11.50 O
TER
ATOM 1 O3' C B 46 -69.226 6.202 -58.910 1.00 24.40 O
ATOM 2 P U B 47 -68.404 4.985 -58.307 1.00 19.02 P
ATOM 3 OP1 U B 47 -67.553 5.552 -57.198 1.00 19.02 O
ATOM 4 OP2 U B 47 -67.744 4.278 -59.465 1.00 19.02 O
ATOM 5 O5' U B 47 -69.552 4.063 -57.694 1.00 19.02 O
ATOM 6 C5' U B 47 -69.591 3.794 -56.299 1.00 19.02 C
ATOM 7 C4' U B 47 -70.361 2.541 -56.000 1.00 19.02 C
ATOM 8 O4' U B 47 -71.660 2.622 -56.626 1.00 19.02 O
ATOM 9 C3' U B 47 -69.736 1.243 -56.509 1.00 19.02 C
ATOM 10 O3' U B 47 -69.987 0.215 -55.576 1.00 19.02 O
ATOM 11 C2' U B 47 -70.528 0.953 -57.765 1.00 19.02 C
ATOM 12 O2' U B 47 -70.559 -0.409 -58.135 1.00 19.02 O
ATOM 13 C1' U B 47 -71.892 1.441 -57.350 1.00 19.02 C
ATOM 14 N1 U B 47 -72.761 1.748 -58.458 1.00 18.30 N
ATOM 15 C2 U B 47 -73.839 0.924 -58.589 1.00 18.30 C
ATOM 16 O2 U B 47 -74.034 0.000 -57.814 1.00 18.30 O
ATOM 17 N3 U B 47 -74.638 1.241 -59.657 1.00 18.30 N
ATOM 18 C4 U B 47 -74.444 2.262 -60.565 1.00 18.30 C
ATOM 19 O4 U B 47 -75.234 2.435 -61.486 1.00 18.30 O
ATOM 20 C5 U B 47 -73.287 3.057 -60.338 1.00 18.30 C
ATOM 21 C6 U B 47 -72.493 2.777 -59.307 1.00 18.30 C
ATOM 22 P A B 48 -68.775 -0.448 -54.796 1.00 30.15 P
ATOM 23 OP1 A B 48 -69.352 -1.107 -53.592 1.00 30.15 O
ATOM 24 OP2 A B 48 -67.741 0.603 -54.618 1.00 30.15 O
ATOM 25 O5' A B 48 -68.255 -1.538 -55.825 1.00 30.15 O
TER
Atoms:
OP1: (-78.960,-5.306,-54.108)
OP2: (-78.944,-5.647,-56.640)
C3': (-78.856,-0.574,-56.226)
C1': (-77.284,-0.451,-57.944)
C5': (-77.633,-2.485,-55.025)
O6: (-79.515,-2.790,-62.882)
O4': (-76.780,-1.324,-56.963)
C8: (-78.503,-2.429,-58.835)
C2: (-77.725,0.198,-62.228)
C6: (-78.913,-1.930,-62.245)
C5: (-78.638,-1.953,-60.883)
C4: (-77.950,-0.905,-60.337)
P: (-78.444,-4.930,-55.436)
C4': (-77.546,-1.167,-55.743)
C2': (-78.387,0.378,-57.290)
O2': (-77.820,1.534,-56.697)
N1: (-78.407,-0.799,-62.861)
N2: (-77.327,1.199,-63.035)
N3: (-77.473,0.201,-60.934)
N7: (-78.982,-2.911,-59.947)
N9: (-77.842,-1.249,-59.019)
O5': (-78.565,-3.362,-55.643)
O3': (-79.610,0.056,-55.214)
OP2: (-78.944,-5.647,-56.640)
C3': (-78.856,-0.574,-56.226)
C1': (-77.284,-0.451,-57.944)
C5': (-77.633,-2.485,-55.025)
O6: (-79.515,-2.790,-62.882)
O4': (-76.780,-1.324,-56.963)
C8: (-78.503,-2.429,-58.835)
C2: (-77.725,0.198,-62.228)
C6: (-78.913,-1.930,-62.245)
C5: (-78.638,-1.953,-60.883)
C4: (-77.950,-0.905,-60.337)
P: (-78.444,-4.930,-55.436)
C4': (-77.546,-1.167,-55.743)
C2': (-78.387,0.378,-57.290)
O2': (-77.820,1.534,-56.697)
N1: (-78.407,-0.799,-62.861)
N2: (-77.327,1.199,-63.035)
N3: (-77.473,0.201,-60.934)
N7: (-78.982,-2.911,-59.947)
N9: (-77.842,-1.249,-59.019)
O5': (-78.565,-3.362,-55.643)
O3': (-79.610,0.056,-55.214)
C4: (-74.444,2.262,-60.565)
N3: (-74.638,1.241,-59.657)
OP1: (-67.553,5.552,-57.198)
OP2: (-67.744,4.278,-59.465)
C2: (-73.839,0.924,-58.589)
C1': (-71.892,1.441,-57.350)
C3': (-69.736,1.243,-56.509)
O5': (-69.552,4.063,-57.694)
O4': (-71.660,2.622,-56.626)
C5': (-69.591,3.794,-56.299)
P: (-68.404,4.985,-58.307)
C4': (-70.361,2.541,-56.000)
C2': (-70.528,0.953,-57.765)
O2': (-70.559,-0.409,-58.135)
N1: (-72.761,1.748,-58.458)
O4: (-75.234,2.435,-61.486)
O2: (-74.034,0.000,-57.814)
C6: (-72.493,2.777,-59.307)
C5: (-73.287,3.057,-60.338)
O3': (-69.987,0.215,-55.576)
N3: (-74.638,1.241,-59.657)
OP1: (-67.553,5.552,-57.198)
OP2: (-67.744,4.278,-59.465)
C2: (-73.839,0.924,-58.589)
C1': (-71.892,1.441,-57.350)
C3': (-69.736,1.243,-56.509)
O5': (-69.552,4.063,-57.694)
O4': (-71.660,2.622,-56.626)
C5': (-69.591,3.794,-56.299)
P: (-68.404,4.985,-58.307)
C4': (-70.361,2.541,-56.000)
C2': (-70.528,0.953,-57.765)
O2': (-70.559,-0.409,-58.135)
N1: (-72.761,1.748,-58.458)
O4: (-75.234,2.435,-61.486)
O2: (-74.034,0.000,-57.814)
C6: (-72.493,2.777,-59.307)
C5: (-73.287,3.057,-60.338)
O3': (-69.987,0.215,-55.576)
Image (generated by PyMOL):