Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1276:A1322
Extra
PDB:
ATOM 1 O3' U A1275 -8.207 -81.991 4.856 1.00 0.01 O
ATOM 2 P G A1276 -8.086 -83.570 4.725 1.00 0.01 P
ATOM 3 OP1 G A1276 -7.191 -84.016 5.795 1.00 0.01 O
ATOM 4 OP2 G A1276 -7.724 -83.869 3.305 1.00 0.01 O
ATOM 5 O5' G A1276 -9.566 -84.056 5.016 1.00 0.01 O
ATOM 6 C5' G A1276 -10.399 -83.375 5.926 1.00 0.01 C
ATOM 7 C4' G A1276 -11.840 -83.469 5.505 1.00 0.01 C
ATOM 8 O4' G A1276 -12.112 -82.524 4.450 1.00 0.01 O
ATOM 9 C3' G A1276 -12.275 -84.784 4.892 1.00 0.01 C
ATOM 10 O3' G A1276 -12.463 -85.782 5.830 1.00 0.01 O
ATOM 11 C2' G A1276 -13.551 -84.400 4.201 1.00 0.01 C
ATOM 12 O2' G A1276 -14.604 -84.254 5.144 1.00 0.01 O
ATOM 13 C1' G A1276 -13.165 -83.029 3.641 1.00 0.01 C
ATOM 14 N9 G A1276 -12.687 -83.163 2.269 1.00 0.01 N
ATOM 15 C8 G A1276 -11.455 -83.615 1.934 1.00 0.01 C
ATOM 16 N7 G A1276 -11.298 -83.727 0.643 1.00 0.01 N
ATOM 17 C5 G A1276 -12.512 -83.351 0.117 1.00 0.01 C
ATOM 18 C6 G A1276 -12.920 -83.283 -1.227 1.00 0.01 C
ATOM 19 O6 G A1276 -12.238 -83.545 -2.228 1.00 0.01 O
ATOM 20 N1 G A1276 -14.234 -82.849 -1.348 1.00 0.01 N
ATOM 21 C2 G A1276 -15.045 -82.525 -0.310 1.00 0.01 C
ATOM 22 N2 G A1276 -16.271 -82.129 -0.659 1.00 0.01 N
ATOM 23 N3 G A1276 -14.673 -82.601 0.964 1.00 0.01 N
ATOM 24 C4 G A1276 -13.395 -83.012 1.107 1.00 0.01 C
ATOM 25 P A A1277 -12.089 -87.280 5.469 1.00 0.01 P
ATOM 26 OP1 A A1277 -12.007 -88.011 6.751 1.00 0.01 O
ATOM 27 OP2 A A1277 -10.907 -87.221 4.585 1.00 0.01 O
ATOM 28 O5' A A1277 -13.349 -87.777 4.653 1.00 0.01 O
TER
ATOM 1 O3' A B1321 -20.579 -79.923 7.004 1.00 0.01 O
ATOM 2 P U B1322 -20.204 -79.840 8.531 1.00 0.01 P
ATOM 3 OP1 U B1322 -19.946 -81.204 8.998 1.00 0.01 O
ATOM 4 OP2 U B1322 -21.248 -79.075 9.189 1.00 0.01 O
ATOM 5 O5' U B1322 -18.849 -79.003 8.470 1.00 0.01 O
ATOM 6 C5' U B1322 -17.707 -79.384 9.236 1.00 0.01 C
ATOM 7 C4' U B1322 -16.423 -79.060 8.521 1.00 0.01 C
ATOM 8 O4' U B1322 -16.288 -79.924 7.357 1.00 0.01 O
ATOM 9 C3' U B1322 -16.317 -77.632 8.005 1.00 0.01 C
ATOM 10 O3' U B1322 -14.992 -77.158 8.167 1.00 0.01 O
ATOM 11 C2' U B1322 -16.608 -77.787 6.530 1.00 0.01 C
ATOM 12 O2' U B1322 -16.052 -76.785 5.708 1.00 0.01 O
ATOM 13 C1' U B1322 -15.984 -79.141 6.243 1.00 0.01 C
ATOM 14 N1 U B1322 -16.524 -79.786 5.033 1.00 0.01 N
ATOM 15 C2 U B1322 -15.672 -80.202 4.047 1.00 0.01 C
ATOM 16 O2 U B1322 -14.487 -80.132 4.170 1.00 0.01 O
ATOM 17 N3 U B1322 -16.255 -80.725 2.940 1.00 0.01 N
ATOM 18 C4 U B1322 -17.612 -80.847 2.700 1.00 0.01 C
ATOM 19 O4 U B1322 -18.056 -81.337 1.656 1.00 0.01 O
ATOM 20 C5 U B1322 -18.438 -80.362 3.750 1.00 0.01 C
ATOM 21 C6 U B1322 -17.878 -79.846 4.846 1.00 0.01 C
ATOM 22 P C B1323 -14.652 -76.115 9.320 1.00 0.01 P
ATOM 23 OP1 C B1323 -13.229 -75.832 9.230 1.00 0.01 O
ATOM 24 OP2 C B1323 -15.180 -76.671 10.580 1.00 0.01 O
ATOM 25 O5' C B1323 -15.481 -74.846 8.888 1.00 0.01 O
TER
ATOM 2 P G A1276 -8.086 -83.570 4.725 1.00 0.01 P
ATOM 3 OP1 G A1276 -7.191 -84.016 5.795 1.00 0.01 O
ATOM 4 OP2 G A1276 -7.724 -83.869 3.305 1.00 0.01 O
ATOM 5 O5' G A1276 -9.566 -84.056 5.016 1.00 0.01 O
ATOM 6 C5' G A1276 -10.399 -83.375 5.926 1.00 0.01 C
ATOM 7 C4' G A1276 -11.840 -83.469 5.505 1.00 0.01 C
ATOM 8 O4' G A1276 -12.112 -82.524 4.450 1.00 0.01 O
ATOM 9 C3' G A1276 -12.275 -84.784 4.892 1.00 0.01 C
ATOM 10 O3' G A1276 -12.463 -85.782 5.830 1.00 0.01 O
ATOM 11 C2' G A1276 -13.551 -84.400 4.201 1.00 0.01 C
ATOM 12 O2' G A1276 -14.604 -84.254 5.144 1.00 0.01 O
ATOM 13 C1' G A1276 -13.165 -83.029 3.641 1.00 0.01 C
ATOM 14 N9 G A1276 -12.687 -83.163 2.269 1.00 0.01 N
ATOM 15 C8 G A1276 -11.455 -83.615 1.934 1.00 0.01 C
ATOM 16 N7 G A1276 -11.298 -83.727 0.643 1.00 0.01 N
ATOM 17 C5 G A1276 -12.512 -83.351 0.117 1.00 0.01 C
ATOM 18 C6 G A1276 -12.920 -83.283 -1.227 1.00 0.01 C
ATOM 19 O6 G A1276 -12.238 -83.545 -2.228 1.00 0.01 O
ATOM 20 N1 G A1276 -14.234 -82.849 -1.348 1.00 0.01 N
ATOM 21 C2 G A1276 -15.045 -82.525 -0.310 1.00 0.01 C
ATOM 22 N2 G A1276 -16.271 -82.129 -0.659 1.00 0.01 N
ATOM 23 N3 G A1276 -14.673 -82.601 0.964 1.00 0.01 N
ATOM 24 C4 G A1276 -13.395 -83.012 1.107 1.00 0.01 C
ATOM 25 P A A1277 -12.089 -87.280 5.469 1.00 0.01 P
ATOM 26 OP1 A A1277 -12.007 -88.011 6.751 1.00 0.01 O
ATOM 27 OP2 A A1277 -10.907 -87.221 4.585 1.00 0.01 O
ATOM 28 O5' A A1277 -13.349 -87.777 4.653 1.00 0.01 O
TER
ATOM 1 O3' A B1321 -20.579 -79.923 7.004 1.00 0.01 O
ATOM 2 P U B1322 -20.204 -79.840 8.531 1.00 0.01 P
ATOM 3 OP1 U B1322 -19.946 -81.204 8.998 1.00 0.01 O
ATOM 4 OP2 U B1322 -21.248 -79.075 9.189 1.00 0.01 O
ATOM 5 O5' U B1322 -18.849 -79.003 8.470 1.00 0.01 O
ATOM 6 C5' U B1322 -17.707 -79.384 9.236 1.00 0.01 C
ATOM 7 C4' U B1322 -16.423 -79.060 8.521 1.00 0.01 C
ATOM 8 O4' U B1322 -16.288 -79.924 7.357 1.00 0.01 O
ATOM 9 C3' U B1322 -16.317 -77.632 8.005 1.00 0.01 C
ATOM 10 O3' U B1322 -14.992 -77.158 8.167 1.00 0.01 O
ATOM 11 C2' U B1322 -16.608 -77.787 6.530 1.00 0.01 C
ATOM 12 O2' U B1322 -16.052 -76.785 5.708 1.00 0.01 O
ATOM 13 C1' U B1322 -15.984 -79.141 6.243 1.00 0.01 C
ATOM 14 N1 U B1322 -16.524 -79.786 5.033 1.00 0.01 N
ATOM 15 C2 U B1322 -15.672 -80.202 4.047 1.00 0.01 C
ATOM 16 O2 U B1322 -14.487 -80.132 4.170 1.00 0.01 O
ATOM 17 N3 U B1322 -16.255 -80.725 2.940 1.00 0.01 N
ATOM 18 C4 U B1322 -17.612 -80.847 2.700 1.00 0.01 C
ATOM 19 O4 U B1322 -18.056 -81.337 1.656 1.00 0.01 O
ATOM 20 C5 U B1322 -18.438 -80.362 3.750 1.00 0.01 C
ATOM 21 C6 U B1322 -17.878 -79.846 4.846 1.00 0.01 C
ATOM 22 P C B1323 -14.652 -76.115 9.320 1.00 0.01 P
ATOM 23 OP1 C B1323 -13.229 -75.832 9.230 1.00 0.01 O
ATOM 24 OP2 C B1323 -15.180 -76.671 10.580 1.00 0.01 O
ATOM 25 O5' C B1323 -15.481 -74.846 8.888 1.00 0.01 O
TER
Atoms:
OP1: (-7.191,-84.016,5.795)
OP2: (-7.724,-83.869,3.305)
C3': (-12.275,-84.784,4.892)
C1': (-13.165,-83.029,3.641)
C5': (-10.399,-83.375,5.926)
O6: (-12.238,-83.545,-2.228)
O4': (-12.112,-82.524,4.450)
C8: (-11.455,-83.615,1.934)
C2: (-15.045,-82.525,-0.310)
C6: (-12.920,-83.283,-1.227)
C5: (-12.512,-83.351,0.117)
C4: (-13.395,-83.012,1.107)
P: (-8.086,-83.570,4.725)
C4': (-11.840,-83.469,5.505)
C2': (-13.551,-84.400,4.201)
O2': (-14.604,-84.254,5.144)
N1: (-14.234,-82.849,-1.348)
N2: (-16.271,-82.129,-0.659)
N3: (-14.673,-82.601,0.964)
N7: (-11.298,-83.727,0.643)
N9: (-12.687,-83.163,2.269)
O5': (-9.566,-84.056,5.016)
O3': (-12.463,-85.782,5.830)
OP2: (-7.724,-83.869,3.305)
C3': (-12.275,-84.784,4.892)
C1': (-13.165,-83.029,3.641)
C5': (-10.399,-83.375,5.926)
O6: (-12.238,-83.545,-2.228)
O4': (-12.112,-82.524,4.450)
C8: (-11.455,-83.615,1.934)
C2: (-15.045,-82.525,-0.310)
C6: (-12.920,-83.283,-1.227)
C5: (-12.512,-83.351,0.117)
C4: (-13.395,-83.012,1.107)
P: (-8.086,-83.570,4.725)
C4': (-11.840,-83.469,5.505)
C2': (-13.551,-84.400,4.201)
O2': (-14.604,-84.254,5.144)
N1: (-14.234,-82.849,-1.348)
N2: (-16.271,-82.129,-0.659)
N3: (-14.673,-82.601,0.964)
N7: (-11.298,-83.727,0.643)
N9: (-12.687,-83.163,2.269)
O5': (-9.566,-84.056,5.016)
O3': (-12.463,-85.782,5.830)
C4: (-17.612,-80.847,2.700)
N3: (-16.255,-80.725,2.940)
OP1: (-19.946,-81.204,8.998)
OP2: (-21.248,-79.075,9.189)
C2: (-15.672,-80.202,4.047)
C1': (-15.984,-79.141,6.243)
C3': (-16.317,-77.632,8.005)
O5': (-18.849,-79.003,8.470)
O4': (-16.288,-79.924,7.357)
C5': (-17.707,-79.384,9.236)
P: (-20.204,-79.840,8.531)
C4': (-16.423,-79.060,8.521)
C2': (-16.608,-77.787,6.530)
O2': (-16.052,-76.785,5.708)
N1: (-16.524,-79.786,5.033)
O4: (-18.056,-81.337,1.656)
O2: (-14.487,-80.132,4.170)
C6: (-17.878,-79.846,4.846)
C5: (-18.438,-80.362,3.750)
O3': (-14.992,-77.158,8.167)
N3: (-16.255,-80.725,2.940)
OP1: (-19.946,-81.204,8.998)
OP2: (-21.248,-79.075,9.189)
C2: (-15.672,-80.202,4.047)
C1': (-15.984,-79.141,6.243)
C3': (-16.317,-77.632,8.005)
O5': (-18.849,-79.003,8.470)
O4': (-16.288,-79.924,7.357)
C5': (-17.707,-79.384,9.236)
P: (-20.204,-79.840,8.531)
C4': (-16.423,-79.060,8.521)
C2': (-16.608,-77.787,6.530)
O2': (-16.052,-76.785,5.708)
N1: (-16.524,-79.786,5.033)
O4: (-18.056,-81.337,1.656)
O2: (-14.487,-80.132,4.170)
C6: (-17.878,-79.846,4.846)
C5: (-18.438,-80.362,3.750)
O3': (-14.992,-77.158,8.167)
Image (generated by PyMOL):