Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:4135:111
Extra
PDB:
ATOM 1 O3' G A 134 55.488 4.681 148.401 1.00 64.05 O
ATOM 2 P G A 135 54.866 4.043 147.046 1.00 70.47 P
ATOM 3 OP1 G A 135 55.956 3.318 146.352 1.00 69.91 O
ATOM 4 OP2 G A 135 54.156 5.144 146.311 1.00 70.15 O
ATOM 5 O5' G A 135 53.806 3.003 147.608 1.00 70.57 O
ATOM 6 C5' G A 135 52.535 2.876 146.990 1.00 70.03 C
ATOM 7 C4' G A 135 51.427 2.695 147.996 1.00 70.65 C
ATOM 8 O4' G A 135 51.120 3.960 148.644 1.00 71.38 O
ATOM 9 C3' G A 135 50.100 2.224 147.424 1.00 70.10 C
ATOM 10 O3' G A 135 50.066 0.824 147.247 1.00 69.70 O
ATOM 11 C2' G A 135 49.085 2.729 148.441 1.00 70.91 C
ATOM 12 O2' G A 135 48.997 1.840 149.554 1.00 71.53 O
ATOM 13 C1' G A 135 49.733 4.050 148.892 1.00 71.54 C
ATOM 14 N9 G A 135 49.204 5.214 148.147 1.00 71.25 N
ATOM 15 C8 G A 135 49.908 6.069 147.338 1.00 70.89 C
ATOM 16 N7 G A 135 49.183 7.018 146.820 1.00 70.73 N
ATOM 17 C5 G A 135 47.909 6.782 147.306 1.00 71.00 C
ATOM 18 C6 G A 135 46.687 7.483 147.083 1.00 71.01 C
ATOM 19 O6 G A 135 46.479 8.481 146.391 1.00 70.77 O
ATOM 20 N1 G A 135 45.629 6.906 147.774 1.00 71.38 N
ATOM 21 C2 G A 135 45.735 5.796 148.575 1.00 71.69 C
ATOM 22 N2 G A 135 44.596 5.391 149.151 1.00 72.04 N
ATOM 23 N3 G A 135 46.867 5.126 148.810 1.00 71.70 N
ATOM 24 C4 G A 135 47.909 5.671 148.136 1.00 71.34 C
ATOM 25 P C A 136 49.252 0.186 146.038 1.00 63.00 P
ATOM 26 OP1 C A 136 49.427 -1.282 146.119 1.00 62.80 O
ATOM 27 OP2 C A 136 49.663 0.890 144.822 1.00 62.30 O
ATOM 28 O5' C A 136 47.769 0.565 146.389 1.00 63.29 O
TER
ATOM 1 O3' A B 10 41.378 -5.363 151.613 1.00 66.39 O
ATOM 2 P U B 11 40.668 -4.517 150.407 1.00 70.51 P
ATOM 3 OP1 U B 11 39.602 -3.689 151.029 1.00 70.84 O
ATOM 4 OP2 U B 11 40.302 -5.477 149.324 1.00 69.86 O
ATOM 5 O5' U B 11 41.833 -3.597 149.880 1.00 70.34 O
ATOM 6 C5' U B 11 42.742 -4.095 148.911 1.00 69.85 C
ATOM 7 C4' U B 11 44.146 -4.037 149.407 1.00 70.21 C
ATOM 8 O4' U B 11 44.646 -2.702 149.215 1.00 70.22 O
ATOM 9 C3' U B 11 44.300 -4.326 150.886 1.00 71.00 C
ATOM 10 O3' U B 11 45.590 -4.812 151.121 1.00 71.19 O
ATOM 11 C2' U B 11 44.238 -2.948 151.509 1.00 71.42 C
ATOM 12 O2' U B 11 44.887 -2.872 152.754 1.00 72.15 O
ATOM 13 C1' U B 11 44.971 -2.126 150.463 1.00 70.95 C
ATOM 14 N1 U B 11 44.563 -0.727 150.422 1.00 71.01 N
ATOM 15 C2 U B 11 45.531 0.185 150.721 1.00 71.31 C
ATOM 16 O2 U B 11 46.651 -0.145 151.022 1.00 71.53 O
ATOM 17 N3 U B 11 45.140 1.489 150.666 1.00 71.37 N
ATOM 18 C4 U B 11 43.880 1.944 150.345 1.00 71.15 C
ATOM 19 O4 U B 11 43.678 3.161 150.343 1.00 71.26 O
ATOM 20 C5 U B 11 42.923 0.921 150.032 1.00 70.83 C
ATOM 21 C6 U B 11 43.290 -0.362 150.079 1.00 70.77 C
ATOM 22 P C B 12 45.979 -6.333 150.871 1.00 57.70 P
ATOM 23 OP1 C B 12 47.422 -6.312 150.842 1.00 57.80 O
ATOM 24 OP2 C B 12 45.262 -6.810 149.688 1.00 56.99 O
ATOM 25 O5' C B 12 45.444 -7.075 152.186 1.00 58.35 O
TER
ATOM 2 P G A 135 54.866 4.043 147.046 1.00 70.47 P
ATOM 3 OP1 G A 135 55.956 3.318 146.352 1.00 69.91 O
ATOM 4 OP2 G A 135 54.156 5.144 146.311 1.00 70.15 O
ATOM 5 O5' G A 135 53.806 3.003 147.608 1.00 70.57 O
ATOM 6 C5' G A 135 52.535 2.876 146.990 1.00 70.03 C
ATOM 7 C4' G A 135 51.427 2.695 147.996 1.00 70.65 C
ATOM 8 O4' G A 135 51.120 3.960 148.644 1.00 71.38 O
ATOM 9 C3' G A 135 50.100 2.224 147.424 1.00 70.10 C
ATOM 10 O3' G A 135 50.066 0.824 147.247 1.00 69.70 O
ATOM 11 C2' G A 135 49.085 2.729 148.441 1.00 70.91 C
ATOM 12 O2' G A 135 48.997 1.840 149.554 1.00 71.53 O
ATOM 13 C1' G A 135 49.733 4.050 148.892 1.00 71.54 C
ATOM 14 N9 G A 135 49.204 5.214 148.147 1.00 71.25 N
ATOM 15 C8 G A 135 49.908 6.069 147.338 1.00 70.89 C
ATOM 16 N7 G A 135 49.183 7.018 146.820 1.00 70.73 N
ATOM 17 C5 G A 135 47.909 6.782 147.306 1.00 71.00 C
ATOM 18 C6 G A 135 46.687 7.483 147.083 1.00 71.01 C
ATOM 19 O6 G A 135 46.479 8.481 146.391 1.00 70.77 O
ATOM 20 N1 G A 135 45.629 6.906 147.774 1.00 71.38 N
ATOM 21 C2 G A 135 45.735 5.796 148.575 1.00 71.69 C
ATOM 22 N2 G A 135 44.596 5.391 149.151 1.00 72.04 N
ATOM 23 N3 G A 135 46.867 5.126 148.810 1.00 71.70 N
ATOM 24 C4 G A 135 47.909 5.671 148.136 1.00 71.34 C
ATOM 25 P C A 136 49.252 0.186 146.038 1.00 63.00 P
ATOM 26 OP1 C A 136 49.427 -1.282 146.119 1.00 62.80 O
ATOM 27 OP2 C A 136 49.663 0.890 144.822 1.00 62.30 O
ATOM 28 O5' C A 136 47.769 0.565 146.389 1.00 63.29 O
TER
ATOM 1 O3' A B 10 41.378 -5.363 151.613 1.00 66.39 O
ATOM 2 P U B 11 40.668 -4.517 150.407 1.00 70.51 P
ATOM 3 OP1 U B 11 39.602 -3.689 151.029 1.00 70.84 O
ATOM 4 OP2 U B 11 40.302 -5.477 149.324 1.00 69.86 O
ATOM 5 O5' U B 11 41.833 -3.597 149.880 1.00 70.34 O
ATOM 6 C5' U B 11 42.742 -4.095 148.911 1.00 69.85 C
ATOM 7 C4' U B 11 44.146 -4.037 149.407 1.00 70.21 C
ATOM 8 O4' U B 11 44.646 -2.702 149.215 1.00 70.22 O
ATOM 9 C3' U B 11 44.300 -4.326 150.886 1.00 71.00 C
ATOM 10 O3' U B 11 45.590 -4.812 151.121 1.00 71.19 O
ATOM 11 C2' U B 11 44.238 -2.948 151.509 1.00 71.42 C
ATOM 12 O2' U B 11 44.887 -2.872 152.754 1.00 72.15 O
ATOM 13 C1' U B 11 44.971 -2.126 150.463 1.00 70.95 C
ATOM 14 N1 U B 11 44.563 -0.727 150.422 1.00 71.01 N
ATOM 15 C2 U B 11 45.531 0.185 150.721 1.00 71.31 C
ATOM 16 O2 U B 11 46.651 -0.145 151.022 1.00 71.53 O
ATOM 17 N3 U B 11 45.140 1.489 150.666 1.00 71.37 N
ATOM 18 C4 U B 11 43.880 1.944 150.345 1.00 71.15 C
ATOM 19 O4 U B 11 43.678 3.161 150.343 1.00 71.26 O
ATOM 20 C5 U B 11 42.923 0.921 150.032 1.00 70.83 C
ATOM 21 C6 U B 11 43.290 -0.362 150.079 1.00 70.77 C
ATOM 22 P C B 12 45.979 -6.333 150.871 1.00 57.70 P
ATOM 23 OP1 C B 12 47.422 -6.312 150.842 1.00 57.80 O
ATOM 24 OP2 C B 12 45.262 -6.810 149.688 1.00 56.99 O
ATOM 25 O5' C B 12 45.444 -7.075 152.186 1.00 58.35 O
TER
Atoms:
OP1: (55.956,3.318,146.352)
OP2: (54.156,5.144,146.311)
C3': (50.100,2.224,147.424)
C1': (49.733,4.050,148.892)
C5': (52.535,2.876,146.990)
O6: (46.479,8.481,146.391)
O4': (51.120,3.960,148.644)
C8: (49.908,6.069,147.338)
C2: (45.735,5.796,148.575)
C6: (46.687,7.483,147.083)
C5: (47.909,6.782,147.306)
C4: (47.909,5.671,148.136)
P: (54.866,4.043,147.046)
C4': (51.427,2.695,147.996)
C2': (49.085,2.729,148.441)
O2': (48.997,1.840,149.554)
N1: (45.629,6.906,147.774)
N2: (44.596,5.391,149.151)
N3: (46.867,5.126,148.810)
N7: (49.183,7.018,146.820)
N9: (49.204,5.214,148.147)
O5': (53.806,3.003,147.608)
O3': (50.066,0.824,147.247)
OP2: (54.156,5.144,146.311)
C3': (50.100,2.224,147.424)
C1': (49.733,4.050,148.892)
C5': (52.535,2.876,146.990)
O6: (46.479,8.481,146.391)
O4': (51.120,3.960,148.644)
C8: (49.908,6.069,147.338)
C2: (45.735,5.796,148.575)
C6: (46.687,7.483,147.083)
C5: (47.909,6.782,147.306)
C4: (47.909,5.671,148.136)
P: (54.866,4.043,147.046)
C4': (51.427,2.695,147.996)
C2': (49.085,2.729,148.441)
O2': (48.997,1.840,149.554)
N1: (45.629,6.906,147.774)
N2: (44.596,5.391,149.151)
N3: (46.867,5.126,148.810)
N7: (49.183,7.018,146.820)
N9: (49.204,5.214,148.147)
O5': (53.806,3.003,147.608)
O3': (50.066,0.824,147.247)
C4: (43.880,1.944,150.345)
N3: (45.140,1.489,150.666)
OP1: (39.602,-3.689,151.029)
OP2: (40.302,-5.477,149.324)
C2: (45.531,0.185,150.721)
C1': (44.971,-2.126,150.463)
C3': (44.300,-4.326,150.886)
O5': (41.833,-3.597,149.880)
O4': (44.646,-2.702,149.215)
C5': (42.742,-4.095,148.911)
P: (40.668,-4.517,150.407)
C4': (44.146,-4.037,149.407)
C2': (44.238,-2.948,151.509)
O2': (44.887,-2.872,152.754)
N1: (44.563,-0.727,150.422)
O4: (43.678,3.161,150.343)
O2: (46.651,-0.145,151.022)
C6: (43.290,-0.362,150.079)
C5: (42.923,0.921,150.032)
O3': (45.590,-4.812,151.121)
N3: (45.140,1.489,150.666)
OP1: (39.602,-3.689,151.029)
OP2: (40.302,-5.477,149.324)
C2: (45.531,0.185,150.721)
C1': (44.971,-2.126,150.463)
C3': (44.300,-4.326,150.886)
O5': (41.833,-3.597,149.880)
O4': (44.646,-2.702,149.215)
C5': (42.742,-4.095,148.911)
P: (40.668,-4.517,150.407)
C4': (44.146,-4.037,149.407)
C2': (44.238,-2.948,151.509)
O2': (44.887,-2.872,152.754)
N1: (44.563,-0.727,150.422)
O4: (43.678,3.161,150.343)
O2: (46.651,-0.145,151.022)
C6: (43.290,-0.362,150.079)
C5: (42.923,0.921,150.032)
O3': (45.590,-4.812,151.121)
Image (generated by PyMOL):