Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GCV:B27:B25
Extra
PDB:
ATOM 1 O3' U A 26 45.418 12.648 5.996 1.00 48.24 O
ATOM 2 P A A 27 44.485 11.370 6.248 1.00 46.70 P
ATOM 3 OP1 A A 27 45.002 10.643 7.438 1.00 43.28 O
ATOM 4 OP2 A A 27 44.352 10.659 4.948 1.00 48.98 O
ATOM 5 O5' A A 27 43.070 11.994 6.645 1.00 44.75 O
ATOM 6 C5' A A 27 42.277 12.721 5.700 1.00 38.14 C
ATOM 7 C4' A A 27 40.831 12.738 6.151 1.00 33.10 C
ATOM 8 O4' A A 27 40.299 11.392 6.109 1.00 30.34 O
ATOM 9 C3' A A 27 40.694 13.205 7.591 1.00 32.01 C
ATOM 10 O3' A A 27 39.583 14.082 7.770 1.00 29.28 O
ATOM 11 C2' A A 27 40.622 11.929 8.430 1.00 30.72 C
ATOM 12 O2' A A 27 39.653 12.032 9.451 1.00 33.97 O
ATOM 13 C1' A A 27 40.099 10.909 7.415 1.00 29.05 C
ATOM 14 N9 A A 27 40.601 9.536 7.500 1.00 25.40 N
ATOM 15 C8 A A 27 41.555 8.905 6.732 1.00 24.60 C
ATOM 16 N7 A A 27 41.736 7.642 7.046 1.00 23.37 N
ATOM 17 C5 A A 27 40.849 7.432 8.094 1.00 24.89 C
ATOM 18 C6 A A 27 40.550 6.297 8.868 1.00 24.52 C
ATOM 19 N6 A A 27 41.140 5.106 8.695 1.00 22.23 N
ATOM 20 N1 A A 27 39.614 6.424 9.834 1.00 24.46 N
ATOM 21 C2 A A 27 39.019 7.613 10.003 1.00 27.01 C
ATOM 22 N3 A A 27 39.213 8.755 9.337 1.00 29.20 N
ATOM 23 C4 A A 27 40.151 8.592 8.388 1.00 25.72 C
ATOM 24 P U A 28 39.796 15.666 7.875 1.00 30.84 P
ATOM 25 OP1 U A 28 39.850 16.224 6.502 1.00 29.21 O
ATOM 26 OP2 U A 28 40.909 15.925 8.819 1.00 30.40 O
ATOM 27 O5' U A 28 38.448 16.153 8.570 1.00 28.30 O
TER
ATOM 1 O3' U B 24 45.966 4.457 -1.672 1.00 48.71 O
ATOM 2 P U B 25 47.373 4.996 -1.103 1.00 50.61 P
ATOM 3 OP1 U B 25 48.088 5.592 -2.262 1.00 51.14 O
ATOM 4 OP2 U B 25 48.020 3.913 -0.314 1.00 46.63 O
ATOM 5 O5' U B 25 46.954 6.176 -0.115 1.00 50.09 O
ATOM 6 C5' U B 25 46.132 7.239 -0.585 1.00 46.52 C
ATOM 7 C4' U B 25 45.770 8.188 0.536 1.00 45.68 C
ATOM 8 O4' U B 25 44.893 7.531 1.498 1.00 43.99 O
ATOM 9 C3' U B 25 47.038 8.570 1.308 1.00 44.59 C
ATOM 10 O3' U B 25 47.059 9.979 1.545 1.00 47.89 O
ATOM 11 C2' U B 25 47.051 7.667 2.546 1.00 43.35 C
ATOM 12 O2' U B 25 47.553 8.284 3.708 1.00 45.40 O
ATOM 13 C1' U B 25 45.555 7.455 2.728 1.00 41.48 C
ATOM 14 N1 U B 25 44.933 6.509 3.663 1.00 37.92 N
ATOM 15 C2 U B 25 43.860 7.009 4.388 1.00 35.59 C
ATOM 16 O2 U B 25 43.378 8.109 4.176 1.00 36.80 O
ATOM 17 N3 U B 25 43.371 6.182 5.364 1.00 31.45 N
ATOM 18 C4 U B 25 43.811 4.925 5.675 1.00 31.64 C
ATOM 19 O4 U B 25 43.288 4.328 6.615 1.00 31.35 O
ATOM 20 C5 U B 25 44.891 4.443 4.848 1.00 35.21 C
ATOM 21 C6 U B 25 45.398 5.235 3.883 1.00 36.14 C
ATOM 22 P U B 26 48.447 10.774 1.677 1.00 47.98 P
ATOM 23 OP1 U B 26 48.491 11.693 0.513 1.00 49.56 O
ATOM 24 OP2 U B 26 49.546 9.800 1.890 1.00 46.98 O
ATOM 25 O5' U B 26 48.262 11.656 2.998 1.00 48.92 O
TER
ATOM 2 P A A 27 44.485 11.370 6.248 1.00 46.70 P
ATOM 3 OP1 A A 27 45.002 10.643 7.438 1.00 43.28 O
ATOM 4 OP2 A A 27 44.352 10.659 4.948 1.00 48.98 O
ATOM 5 O5' A A 27 43.070 11.994 6.645 1.00 44.75 O
ATOM 6 C5' A A 27 42.277 12.721 5.700 1.00 38.14 C
ATOM 7 C4' A A 27 40.831 12.738 6.151 1.00 33.10 C
ATOM 8 O4' A A 27 40.299 11.392 6.109 1.00 30.34 O
ATOM 9 C3' A A 27 40.694 13.205 7.591 1.00 32.01 C
ATOM 10 O3' A A 27 39.583 14.082 7.770 1.00 29.28 O
ATOM 11 C2' A A 27 40.622 11.929 8.430 1.00 30.72 C
ATOM 12 O2' A A 27 39.653 12.032 9.451 1.00 33.97 O
ATOM 13 C1' A A 27 40.099 10.909 7.415 1.00 29.05 C
ATOM 14 N9 A A 27 40.601 9.536 7.500 1.00 25.40 N
ATOM 15 C8 A A 27 41.555 8.905 6.732 1.00 24.60 C
ATOM 16 N7 A A 27 41.736 7.642 7.046 1.00 23.37 N
ATOM 17 C5 A A 27 40.849 7.432 8.094 1.00 24.89 C
ATOM 18 C6 A A 27 40.550 6.297 8.868 1.00 24.52 C
ATOM 19 N6 A A 27 41.140 5.106 8.695 1.00 22.23 N
ATOM 20 N1 A A 27 39.614 6.424 9.834 1.00 24.46 N
ATOM 21 C2 A A 27 39.019 7.613 10.003 1.00 27.01 C
ATOM 22 N3 A A 27 39.213 8.755 9.337 1.00 29.20 N
ATOM 23 C4 A A 27 40.151 8.592 8.388 1.00 25.72 C
ATOM 24 P U A 28 39.796 15.666 7.875 1.00 30.84 P
ATOM 25 OP1 U A 28 39.850 16.224 6.502 1.00 29.21 O
ATOM 26 OP2 U A 28 40.909 15.925 8.819 1.00 30.40 O
ATOM 27 O5' U A 28 38.448 16.153 8.570 1.00 28.30 O
TER
ATOM 1 O3' U B 24 45.966 4.457 -1.672 1.00 48.71 O
ATOM 2 P U B 25 47.373 4.996 -1.103 1.00 50.61 P
ATOM 3 OP1 U B 25 48.088 5.592 -2.262 1.00 51.14 O
ATOM 4 OP2 U B 25 48.020 3.913 -0.314 1.00 46.63 O
ATOM 5 O5' U B 25 46.954 6.176 -0.115 1.00 50.09 O
ATOM 6 C5' U B 25 46.132 7.239 -0.585 1.00 46.52 C
ATOM 7 C4' U B 25 45.770 8.188 0.536 1.00 45.68 C
ATOM 8 O4' U B 25 44.893 7.531 1.498 1.00 43.99 O
ATOM 9 C3' U B 25 47.038 8.570 1.308 1.00 44.59 C
ATOM 10 O3' U B 25 47.059 9.979 1.545 1.00 47.89 O
ATOM 11 C2' U B 25 47.051 7.667 2.546 1.00 43.35 C
ATOM 12 O2' U B 25 47.553 8.284 3.708 1.00 45.40 O
ATOM 13 C1' U B 25 45.555 7.455 2.728 1.00 41.48 C
ATOM 14 N1 U B 25 44.933 6.509 3.663 1.00 37.92 N
ATOM 15 C2 U B 25 43.860 7.009 4.388 1.00 35.59 C
ATOM 16 O2 U B 25 43.378 8.109 4.176 1.00 36.80 O
ATOM 17 N3 U B 25 43.371 6.182 5.364 1.00 31.45 N
ATOM 18 C4 U B 25 43.811 4.925 5.675 1.00 31.64 C
ATOM 19 O4 U B 25 43.288 4.328 6.615 1.00 31.35 O
ATOM 20 C5 U B 25 44.891 4.443 4.848 1.00 35.21 C
ATOM 21 C6 U B 25 45.398 5.235 3.883 1.00 36.14 C
ATOM 22 P U B 26 48.447 10.774 1.677 1.00 47.98 P
ATOM 23 OP1 U B 26 48.491 11.693 0.513 1.00 49.56 O
ATOM 24 OP2 U B 26 49.546 9.800 1.890 1.00 46.98 O
ATOM 25 O5' U B 26 48.262 11.656 2.998 1.00 48.92 O
TER
Atoms:
OP1: (45.002,10.643,7.438)
OP2: (44.352,10.659,4.948)
C3': (40.694,13.205,7.591)
C1': (40.099,10.909,7.415)
C5': (42.277,12.721,5.700)
O4': (40.299,11.392,6.109)
C8: (41.555,8.905,6.732)
O2': (39.653,12.032,9.451)
C6: (40.550,6.297,8.868)
C5: (40.849,7.432,8.094)
C4: (40.151,8.592,8.388)
P: (44.485,11.370,6.248)
C4': (40.831,12.738,6.151)
C2': (40.622,11.929,8.430)
C2: (39.019,7.613,10.003)
N1: (39.614,6.424,9.834)
N3: (39.213,8.755,9.337)
N6: (41.140,5.106,8.695)
N7: (41.736,7.642,7.046)
N9: (40.601,9.536,7.500)
O5': (43.070,11.994,6.645)
O3': (39.583,14.082,7.770)
OP2: (44.352,10.659,4.948)
C3': (40.694,13.205,7.591)
C1': (40.099,10.909,7.415)
C5': (42.277,12.721,5.700)
O4': (40.299,11.392,6.109)
C8: (41.555,8.905,6.732)
O2': (39.653,12.032,9.451)
C6: (40.550,6.297,8.868)
C5: (40.849,7.432,8.094)
C4: (40.151,8.592,8.388)
P: (44.485,11.370,6.248)
C4': (40.831,12.738,6.151)
C2': (40.622,11.929,8.430)
C2: (39.019,7.613,10.003)
N1: (39.614,6.424,9.834)
N3: (39.213,8.755,9.337)
N6: (41.140,5.106,8.695)
N7: (41.736,7.642,7.046)
N9: (40.601,9.536,7.500)
O5': (43.070,11.994,6.645)
O3': (39.583,14.082,7.770)
C4: (43.811,4.925,5.675)
N3: (43.371,6.182,5.364)
OP1: (48.088,5.592,-2.262)
OP2: (48.020,3.913,-0.314)
C2: (43.860,7.009,4.388)
C1': (45.555,7.455,2.728)
C3': (47.038,8.570,1.308)
O5': (46.954,6.176,-0.115)
O4': (44.893,7.531,1.498)
C5': (46.132,7.239,-0.585)
P: (47.373,4.996,-1.103)
C4': (45.770,8.188,0.536)
C2': (47.051,7.667,2.546)
O2': (47.553,8.284,3.708)
N1: (44.933,6.509,3.663)
O4: (43.288,4.328,6.615)
O2: (43.378,8.109,4.176)
C6: (45.398,5.235,3.883)
C5: (44.891,4.443,4.848)
O3': (47.059,9.979,1.545)
N3: (43.371,6.182,5.364)
OP1: (48.088,5.592,-2.262)
OP2: (48.020,3.913,-0.314)
C2: (43.860,7.009,4.388)
C1': (45.555,7.455,2.728)
C3': (47.038,8.570,1.308)
O5': (46.954,6.176,-0.115)
O4': (44.893,7.531,1.498)
C5': (46.132,7.239,-0.585)
P: (47.373,4.996,-1.103)
C4': (45.770,8.188,0.536)
C2': (47.051,7.667,2.546)
O2': (47.553,8.284,3.708)
N1: (44.933,6.509,3.663)
O4: (43.288,4.328,6.615)
O2: (43.378,8.109,4.176)
C6: (45.398,5.235,3.883)
C5: (44.891,4.443,4.848)
O3': (47.059,9.979,1.545)
Image (generated by PyMOL):