Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11263:11261
Extra
PDB:
ATOM 1 O3' A A1262 49.748 7.422 14.326 1.00 38.53 O
ATOM 2 P G A1263 49.299 5.874 14.229 1.00 41.84 P
ATOM 3 OP1 G A1263 49.547 5.252 15.542 1.00 41.39 O
ATOM 4 OP2 G A1263 49.950 5.301 13.036 1.00 42.17 O
ATOM 5 O5' G A1263 47.749 5.993 13.969 1.00 41.96 O
ATOM 6 C5' G A1263 46.835 6.310 15.015 1.00 41.67 C
ATOM 7 C4' G A1263 45.417 5.974 14.609 1.00 41.81 C
ATOM 8 O4' G A1263 45.015 6.828 13.499 1.00 42.24 O
ATOM 9 C3' G A1263 45.202 4.567 14.089 1.00 41.88 C
ATOM 10 O3' G A1263 45.007 3.638 15.114 1.00 41.51 O
ATOM 11 C2' G A1263 44.005 4.711 13.161 1.00 42.23 C
ATOM 12 O2' G A1263 42.766 4.718 13.886 1.00 42.05 O
ATOM 13 C1' G A1263 44.239 6.103 12.582 1.00 42.51 C
ATOM 14 N9 G A1263 44.955 6.052 11.298 1.00 42.91 N
ATOM 15 C8 G A1263 46.236 6.464 11.030 1.00 42.99 C
ATOM 16 N7 G A1263 46.554 6.260 9.782 1.00 43.39 N
ATOM 17 C5 G A1263 45.412 5.707 9.200 1.00 43.59 C
ATOM 18 C6 G A1263 45.152 5.295 7.862 1.00 44.04 C
ATOM 19 O6 G A1263 45.902 5.308 6.908 1.00 44.36 O
ATOM 20 N1 G A1263 43.869 4.790 7.670 1.00 44.12 N
ATOM 21 C2 G A1263 42.952 4.683 8.691 1.00 43.79 C
ATOM 22 N2 G A1263 41.804 4.135 8.301 1.00 43.95 N
ATOM 23 N3 G A1263 43.154 5.069 9.959 1.00 43.37 N
ATOM 24 C4 G A1263 44.403 5.576 10.128 1.00 43.29 C
ATOM 25 P C A1264 45.575 2.146 14.970 1.00 39.68 P
ATOM 26 OP1 C A1264 45.496 1.552 16.286 1.00 39.25 O
ATOM 27 OP2 C A1264 46.862 2.213 14.305 1.00 39.86 O
ATOM 28 O5' C A1264 44.562 1.450 13.995 1.00 39.99 O
TER
ATOM 1 O3' C B1260 48.869 8.609 4.590 1.00 47.00 O
ATOM 2 P A B1261 50.326 8.707 5.196 1.00 48.26 P
ATOM 3 OP1 A B1261 51.224 9.027 4.097 1.00 48.68 O
ATOM 4 OP2 A B1261 50.544 7.486 5.973 1.00 47.87 O
ATOM 5 O5' A B1261 50.237 9.941 6.162 1.00 48.02 O
ATOM 6 C5' A B1261 49.166 10.083 7.053 1.00 47.73 C
ATOM 7 C4' A B1261 49.653 10.260 8.439 1.00 47.25 C
ATOM 8 O4' A B1261 48.539 10.706 9.257 1.00 47.03 O
ATOM 9 C3' A B1261 50.129 8.983 9.075 1.00 46.90 C
ATOM 10 O3' A B1261 50.905 9.303 10.230 1.00 46.53 O
ATOM 11 C2' A B1261 48.819 8.423 9.535 1.00 46.72 C
ATOM 12 O2' A B1261 48.935 7.372 10.465 1.00 46.31 O
ATOM 13 C1' A B1261 48.228 9.690 10.163 1.00 46.63 C
ATOM 14 N9 A B1261 46.786 9.644 10.376 1.00 46.59 N
ATOM 15 C8 A B1261 46.173 9.936 11.559 1.00 46.24 C
ATOM 16 N7 A B1261 44.891 9.746 11.538 1.00 46.27 N
ATOM 17 C5 A B1261 44.645 9.275 10.245 1.00 46.67 C
ATOM 18 C6 A B1261 43.477 8.870 9.567 1.00 46.91 C
ATOM 19 N6 A B1261 42.266 8.900 10.120 1.00 46.78 N
ATOM 20 N1 A B1261 43.582 8.431 8.299 1.00 47.31 N
ATOM 21 C2 A B1261 44.765 8.424 7.715 1.00 47.47 C
ATOM 22 N3 A B1261 45.919 8.787 8.245 1.00 47.27 N
ATOM 23 C4 A B1261 45.807 9.206 9.516 1.00 46.87 C
ATOM 24 P A B1262 52.501 9.406 10.144 1.00 40.04 P
ATOM 25 OP1 A B1262 52.824 10.828 9.788 1.00 40.30 O
ATOM 26 OP2 A B1262 52.960 8.291 9.230 1.00 40.25 O
ATOM 27 O5' A B1262 52.959 9.112 11.653 1.00 39.52 O
TER
ATOM 2 P G A1263 49.299 5.874 14.229 1.00 41.84 P
ATOM 3 OP1 G A1263 49.547 5.252 15.542 1.00 41.39 O
ATOM 4 OP2 G A1263 49.950 5.301 13.036 1.00 42.17 O
ATOM 5 O5' G A1263 47.749 5.993 13.969 1.00 41.96 O
ATOM 6 C5' G A1263 46.835 6.310 15.015 1.00 41.67 C
ATOM 7 C4' G A1263 45.417 5.974 14.609 1.00 41.81 C
ATOM 8 O4' G A1263 45.015 6.828 13.499 1.00 42.24 O
ATOM 9 C3' G A1263 45.202 4.567 14.089 1.00 41.88 C
ATOM 10 O3' G A1263 45.007 3.638 15.114 1.00 41.51 O
ATOM 11 C2' G A1263 44.005 4.711 13.161 1.00 42.23 C
ATOM 12 O2' G A1263 42.766 4.718 13.886 1.00 42.05 O
ATOM 13 C1' G A1263 44.239 6.103 12.582 1.00 42.51 C
ATOM 14 N9 G A1263 44.955 6.052 11.298 1.00 42.91 N
ATOM 15 C8 G A1263 46.236 6.464 11.030 1.00 42.99 C
ATOM 16 N7 G A1263 46.554 6.260 9.782 1.00 43.39 N
ATOM 17 C5 G A1263 45.412 5.707 9.200 1.00 43.59 C
ATOM 18 C6 G A1263 45.152 5.295 7.862 1.00 44.04 C
ATOM 19 O6 G A1263 45.902 5.308 6.908 1.00 44.36 O
ATOM 20 N1 G A1263 43.869 4.790 7.670 1.00 44.12 N
ATOM 21 C2 G A1263 42.952 4.683 8.691 1.00 43.79 C
ATOM 22 N2 G A1263 41.804 4.135 8.301 1.00 43.95 N
ATOM 23 N3 G A1263 43.154 5.069 9.959 1.00 43.37 N
ATOM 24 C4 G A1263 44.403 5.576 10.128 1.00 43.29 C
ATOM 25 P C A1264 45.575 2.146 14.970 1.00 39.68 P
ATOM 26 OP1 C A1264 45.496 1.552 16.286 1.00 39.25 O
ATOM 27 OP2 C A1264 46.862 2.213 14.305 1.00 39.86 O
ATOM 28 O5' C A1264 44.562 1.450 13.995 1.00 39.99 O
TER
ATOM 1 O3' C B1260 48.869 8.609 4.590 1.00 47.00 O
ATOM 2 P A B1261 50.326 8.707 5.196 1.00 48.26 P
ATOM 3 OP1 A B1261 51.224 9.027 4.097 1.00 48.68 O
ATOM 4 OP2 A B1261 50.544 7.486 5.973 1.00 47.87 O
ATOM 5 O5' A B1261 50.237 9.941 6.162 1.00 48.02 O
ATOM 6 C5' A B1261 49.166 10.083 7.053 1.00 47.73 C
ATOM 7 C4' A B1261 49.653 10.260 8.439 1.00 47.25 C
ATOM 8 O4' A B1261 48.539 10.706 9.257 1.00 47.03 O
ATOM 9 C3' A B1261 50.129 8.983 9.075 1.00 46.90 C
ATOM 10 O3' A B1261 50.905 9.303 10.230 1.00 46.53 O
ATOM 11 C2' A B1261 48.819 8.423 9.535 1.00 46.72 C
ATOM 12 O2' A B1261 48.935 7.372 10.465 1.00 46.31 O
ATOM 13 C1' A B1261 48.228 9.690 10.163 1.00 46.63 C
ATOM 14 N9 A B1261 46.786 9.644 10.376 1.00 46.59 N
ATOM 15 C8 A B1261 46.173 9.936 11.559 1.00 46.24 C
ATOM 16 N7 A B1261 44.891 9.746 11.538 1.00 46.27 N
ATOM 17 C5 A B1261 44.645 9.275 10.245 1.00 46.67 C
ATOM 18 C6 A B1261 43.477 8.870 9.567 1.00 46.91 C
ATOM 19 N6 A B1261 42.266 8.900 10.120 1.00 46.78 N
ATOM 20 N1 A B1261 43.582 8.431 8.299 1.00 47.31 N
ATOM 21 C2 A B1261 44.765 8.424 7.715 1.00 47.47 C
ATOM 22 N3 A B1261 45.919 8.787 8.245 1.00 47.27 N
ATOM 23 C4 A B1261 45.807 9.206 9.516 1.00 46.87 C
ATOM 24 P A B1262 52.501 9.406 10.144 1.00 40.04 P
ATOM 25 OP1 A B1262 52.824 10.828 9.788 1.00 40.30 O
ATOM 26 OP2 A B1262 52.960 8.291 9.230 1.00 40.25 O
ATOM 27 O5' A B1262 52.959 9.112 11.653 1.00 39.52 O
TER
Atoms:
OP1: (49.547,5.252,15.542)
OP2: (49.950,5.301,13.036)
C3': (45.202,4.567,14.089)
C1': (44.239,6.103,12.582)
C5': (46.835,6.310,15.015)
O6: (45.902,5.308,6.908)
O4': (45.015,6.828,13.499)
C8: (46.236,6.464,11.030)
C2: (42.952,4.683,8.691)
C6: (45.152,5.295,7.862)
C5: (45.412,5.707,9.200)
C4: (44.403,5.576,10.128)
P: (49.299,5.874,14.229)
C4': (45.417,5.974,14.609)
C2': (44.005,4.711,13.161)
O2': (42.766,4.718,13.886)
N1: (43.869,4.790,7.670)
N2: (41.804,4.135,8.301)
N3: (43.154,5.069,9.959)
N7: (46.554,6.260,9.782)
N9: (44.955,6.052,11.298)
O5': (47.749,5.993,13.969)
O3': (45.007,3.638,15.114)
OP2: (49.950,5.301,13.036)
C3': (45.202,4.567,14.089)
C1': (44.239,6.103,12.582)
C5': (46.835,6.310,15.015)
O6: (45.902,5.308,6.908)
O4': (45.015,6.828,13.499)
C8: (46.236,6.464,11.030)
C2: (42.952,4.683,8.691)
C6: (45.152,5.295,7.862)
C5: (45.412,5.707,9.200)
C4: (44.403,5.576,10.128)
P: (49.299,5.874,14.229)
C4': (45.417,5.974,14.609)
C2': (44.005,4.711,13.161)
O2': (42.766,4.718,13.886)
N1: (43.869,4.790,7.670)
N2: (41.804,4.135,8.301)
N3: (43.154,5.069,9.959)
N7: (46.554,6.260,9.782)
N9: (44.955,6.052,11.298)
O5': (47.749,5.993,13.969)
O3': (45.007,3.638,15.114)
OP1: (51.224,9.027,4.097)
OP2: (50.544,7.486,5.973)
C3': (50.129,8.983,9.075)
C1': (48.228,9.690,10.163)
C5': (49.166,10.083,7.053)
O4': (48.539,10.706,9.257)
C8: (46.173,9.936,11.559)
O2': (48.935,7.372,10.465)
C6: (43.477,8.870,9.567)
C5: (44.645,9.275,10.245)
C4: (45.807,9.206,9.516)
P: (50.326,8.707,5.196)
C4': (49.653,10.260,8.439)
C2': (48.819,8.423,9.535)
C2: (44.765,8.424,7.715)
N1: (43.582,8.431,8.299)
N3: (45.919,8.787,8.245)
N6: (42.266,8.900,10.120)
N7: (44.891,9.746,11.538)
N9: (46.786,9.644,10.376)
O5': (50.237,9.941,6.162)
O3': (50.905,9.303,10.230)
OP2: (50.544,7.486,5.973)
C3': (50.129,8.983,9.075)
C1': (48.228,9.690,10.163)
C5': (49.166,10.083,7.053)
O4': (48.539,10.706,9.257)
C8: (46.173,9.936,11.559)
O2': (48.935,7.372,10.465)
C6: (43.477,8.870,9.567)
C5: (44.645,9.275,10.245)
C4: (45.807,9.206,9.516)
P: (50.326,8.707,5.196)
C4': (49.653,10.260,8.439)
C2': (48.819,8.423,9.535)
C2: (44.765,8.424,7.715)
N1: (43.582,8.431,8.299)
N3: (45.919,8.787,8.245)
N6: (42.266,8.900,10.120)
N7: (44.891,9.746,11.538)
N9: (46.786,9.644,10.376)
O5': (50.237,9.941,6.162)
O3': (50.905,9.303,10.230)
Image (generated by PyMOL):