Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2ZJR:X34:X387
Extra
PDB:
ATOM 1 O3' U A 33 -8.485 142.644 109.677 1.00 41.41 O
ATOM 2 P G A 34 -7.242 143.602 109.988 1.00 38.07 P
ATOM 3 OP1 G A 34 -7.407 144.210 111.338 1.00 36.30 O
ATOM 4 OP2 G A 34 -7.156 144.477 108.798 1.00 37.94 O
ATOM 5 O5' G A 34 -5.978 142.642 109.956 1.00 36.18 O
ATOM 6 C5' G A 34 -4.816 142.944 110.722 1.00 33.88 C
ATOM 7 C4' G A 34 -3.569 142.626 109.935 1.00 30.03 C
ATOM 8 O4' G A 34 -3.763 141.383 109.206 1.00 30.11 O
ATOM 9 C3' G A 34 -3.213 143.600 108.833 1.00 28.91 C
ATOM 10 O3' G A 34 -2.498 144.695 109.374 1.00 26.09 O
ATOM 11 C2' G A 34 -2.301 142.767 107.947 1.00 28.52 C
ATOM 12 O2' G A 34 -0.985 142.745 108.425 1.00 31.36 O
ATOM 13 C1' G A 34 -2.903 141.371 108.090 1.00 29.71 C
ATOM 14 N9 G A 34 -3.635 140.991 106.891 1.00 29.71 N
ATOM 15 C8 G A 34 -4.977 141.066 106.642 1.00 30.27 C
ATOM 16 N7 G A 34 -5.293 140.688 105.428 1.00 30.03 N
ATOM 17 C5 G A 34 -4.086 140.333 104.855 1.00 29.53 C
ATOM 18 C6 G A 34 -3.789 139.841 103.562 1.00 29.32 C
ATOM 19 O6 G A 34 -4.567 139.603 102.628 1.00 27.37 O
ATOM 20 N1 G A 34 -2.419 139.619 103.404 1.00 30.11 N
ATOM 21 C2 G A 34 -1.468 139.843 104.369 1.00 29.82 C
ATOM 22 N2 G A 34 -0.206 139.611 104.040 1.00 30.06 N
ATOM 23 N3 G A 34 -1.740 140.281 105.578 1.00 30.31 N
ATOM 24 C4 G A 34 -3.056 140.506 105.750 1.00 30.34 C
ATOM 25 P G A 35 -1.889 145.813 108.393 1.00 25.01 P
ATOM 26 OP1 G A 35 -1.340 146.914 109.224 1.00 25.26 O
ATOM 27 OP2 G A 35 -2.904 146.120 107.366 1.00 25.78 O
ATOM 28 O5' G A 35 -0.697 145.071 107.650 1.00 23.80 O
TER
ATOM 1 O3' C B 386 2.994 140.564 112.902 1.00 17.01 O
ATOM 2 P A B 387 2.052 139.987 111.734 1.00 19.11 P
ATOM 3 OP1 A B 387 1.777 138.554 111.952 1.00 21.00 O
ATOM 4 OP2 A B 387 2.649 140.399 110.444 1.00 20.15 O
ATOM 5 O5' A B 387 0.689 140.800 111.926 1.00 21.27 O
ATOM 6 C5' A B 387 0.076 140.993 113.213 1.00 21.13 C
ATOM 7 C4' A B 387 -1.376 140.582 113.157 1.00 22.66 C
ATOM 8 O4' A B 387 -1.725 140.315 111.787 1.00 23.14 O
ATOM 9 C3' A B 387 -1.662 139.303 113.922 1.00 25.69 C
ATOM 10 O3' A B 387 -2.082 139.602 115.276 1.00 28.78 O
ATOM 11 C2' A B 387 -2.647 138.500 113.062 1.00 25.14 C
ATOM 12 O2' A B 387 -3.983 138.508 113.489 1.00 27.95 O
ATOM 13 C1' A B 387 -2.560 139.187 111.706 1.00 24.49 C
ATOM 14 N9 A B 387 -2.170 138.380 110.551 1.00 24.77 N
ATOM 15 C8 A B 387 -0.966 137.800 110.252 1.00 24.81 C
ATOM 16 N7 A B 387 -0.953 137.170 109.099 1.00 23.88 N
ATOM 17 C5 A B 387 -2.233 137.351 108.610 1.00 25.12 C
ATOM 18 C6 A B 387 -2.852 136.950 107.425 1.00 25.60 C
ATOM 19 N6 A B 387 -2.232 136.284 106.461 1.00 26.11 N
ATOM 20 N1 A B 387 -4.148 137.272 107.254 1.00 25.31 N
ATOM 21 C2 A B 387 -4.760 137.974 108.203 1.00 24.83 C
ATOM 22 N3 A B 387 -4.284 138.429 109.348 1.00 25.12 N
ATOM 23 C4 A B 387 -2.998 138.078 109.498 1.00 25.10 C
ATOM 24 P U B 388 -3.279 140.667 115.553 1.00 30.66 P
ATOM 25 OP1 U B 388 -3.733 140.604 116.970 1.00 31.20 O
ATOM 26 OP2 U B 388 -4.277 140.575 114.468 1.00 30.76 O
ATOM 27 O5' U B 388 -2.579 142.081 115.341 1.00 31.63 O
TER
ATOM 2 P G A 34 -7.242 143.602 109.988 1.00 38.07 P
ATOM 3 OP1 G A 34 -7.407 144.210 111.338 1.00 36.30 O
ATOM 4 OP2 G A 34 -7.156 144.477 108.798 1.00 37.94 O
ATOM 5 O5' G A 34 -5.978 142.642 109.956 1.00 36.18 O
ATOM 6 C5' G A 34 -4.816 142.944 110.722 1.00 33.88 C
ATOM 7 C4' G A 34 -3.569 142.626 109.935 1.00 30.03 C
ATOM 8 O4' G A 34 -3.763 141.383 109.206 1.00 30.11 O
ATOM 9 C3' G A 34 -3.213 143.600 108.833 1.00 28.91 C
ATOM 10 O3' G A 34 -2.498 144.695 109.374 1.00 26.09 O
ATOM 11 C2' G A 34 -2.301 142.767 107.947 1.00 28.52 C
ATOM 12 O2' G A 34 -0.985 142.745 108.425 1.00 31.36 O
ATOM 13 C1' G A 34 -2.903 141.371 108.090 1.00 29.71 C
ATOM 14 N9 G A 34 -3.635 140.991 106.891 1.00 29.71 N
ATOM 15 C8 G A 34 -4.977 141.066 106.642 1.00 30.27 C
ATOM 16 N7 G A 34 -5.293 140.688 105.428 1.00 30.03 N
ATOM 17 C5 G A 34 -4.086 140.333 104.855 1.00 29.53 C
ATOM 18 C6 G A 34 -3.789 139.841 103.562 1.00 29.32 C
ATOM 19 O6 G A 34 -4.567 139.603 102.628 1.00 27.37 O
ATOM 20 N1 G A 34 -2.419 139.619 103.404 1.00 30.11 N
ATOM 21 C2 G A 34 -1.468 139.843 104.369 1.00 29.82 C
ATOM 22 N2 G A 34 -0.206 139.611 104.040 1.00 30.06 N
ATOM 23 N3 G A 34 -1.740 140.281 105.578 1.00 30.31 N
ATOM 24 C4 G A 34 -3.056 140.506 105.750 1.00 30.34 C
ATOM 25 P G A 35 -1.889 145.813 108.393 1.00 25.01 P
ATOM 26 OP1 G A 35 -1.340 146.914 109.224 1.00 25.26 O
ATOM 27 OP2 G A 35 -2.904 146.120 107.366 1.00 25.78 O
ATOM 28 O5' G A 35 -0.697 145.071 107.650 1.00 23.80 O
TER
ATOM 1 O3' C B 386 2.994 140.564 112.902 1.00 17.01 O
ATOM 2 P A B 387 2.052 139.987 111.734 1.00 19.11 P
ATOM 3 OP1 A B 387 1.777 138.554 111.952 1.00 21.00 O
ATOM 4 OP2 A B 387 2.649 140.399 110.444 1.00 20.15 O
ATOM 5 O5' A B 387 0.689 140.800 111.926 1.00 21.27 O
ATOM 6 C5' A B 387 0.076 140.993 113.213 1.00 21.13 C
ATOM 7 C4' A B 387 -1.376 140.582 113.157 1.00 22.66 C
ATOM 8 O4' A B 387 -1.725 140.315 111.787 1.00 23.14 O
ATOM 9 C3' A B 387 -1.662 139.303 113.922 1.00 25.69 C
ATOM 10 O3' A B 387 -2.082 139.602 115.276 1.00 28.78 O
ATOM 11 C2' A B 387 -2.647 138.500 113.062 1.00 25.14 C
ATOM 12 O2' A B 387 -3.983 138.508 113.489 1.00 27.95 O
ATOM 13 C1' A B 387 -2.560 139.187 111.706 1.00 24.49 C
ATOM 14 N9 A B 387 -2.170 138.380 110.551 1.00 24.77 N
ATOM 15 C8 A B 387 -0.966 137.800 110.252 1.00 24.81 C
ATOM 16 N7 A B 387 -0.953 137.170 109.099 1.00 23.88 N
ATOM 17 C5 A B 387 -2.233 137.351 108.610 1.00 25.12 C
ATOM 18 C6 A B 387 -2.852 136.950 107.425 1.00 25.60 C
ATOM 19 N6 A B 387 -2.232 136.284 106.461 1.00 26.11 N
ATOM 20 N1 A B 387 -4.148 137.272 107.254 1.00 25.31 N
ATOM 21 C2 A B 387 -4.760 137.974 108.203 1.00 24.83 C
ATOM 22 N3 A B 387 -4.284 138.429 109.348 1.00 25.12 N
ATOM 23 C4 A B 387 -2.998 138.078 109.498 1.00 25.10 C
ATOM 24 P U B 388 -3.279 140.667 115.553 1.00 30.66 P
ATOM 25 OP1 U B 388 -3.733 140.604 116.970 1.00 31.20 O
ATOM 26 OP2 U B 388 -4.277 140.575 114.468 1.00 30.76 O
ATOM 27 O5' U B 388 -2.579 142.081 115.341 1.00 31.63 O
TER
Atoms:
OP1: (-7.407,144.210,111.338)
OP2: (-7.156,144.477,108.798)
C3': (-3.213,143.600,108.833)
C1': (-2.903,141.371,108.090)
C5': (-4.816,142.944,110.722)
O6: (-4.567,139.603,102.628)
O4': (-3.763,141.383,109.206)
C8: (-4.977,141.066,106.642)
C2: (-1.468,139.843,104.369)
C6: (-3.789,139.841,103.562)
C5: (-4.086,140.333,104.855)
C4: (-3.056,140.506,105.750)
P: (-7.242,143.602,109.988)
C4': (-3.569,142.626,109.935)
C2': (-2.301,142.767,107.947)
O2': (-0.985,142.745,108.425)
N1: (-2.419,139.619,103.404)
N2: (-0.206,139.611,104.040)
N3: (-1.740,140.281,105.578)
N7: (-5.293,140.688,105.428)
N9: (-3.635,140.991,106.891)
O5': (-5.978,142.642,109.956)
O3': (-2.498,144.695,109.374)
OP2: (-7.156,144.477,108.798)
C3': (-3.213,143.600,108.833)
C1': (-2.903,141.371,108.090)
C5': (-4.816,142.944,110.722)
O6: (-4.567,139.603,102.628)
O4': (-3.763,141.383,109.206)
C8: (-4.977,141.066,106.642)
C2: (-1.468,139.843,104.369)
C6: (-3.789,139.841,103.562)
C5: (-4.086,140.333,104.855)
C4: (-3.056,140.506,105.750)
P: (-7.242,143.602,109.988)
C4': (-3.569,142.626,109.935)
C2': (-2.301,142.767,107.947)
O2': (-0.985,142.745,108.425)
N1: (-2.419,139.619,103.404)
N2: (-0.206,139.611,104.040)
N3: (-1.740,140.281,105.578)
N7: (-5.293,140.688,105.428)
N9: (-3.635,140.991,106.891)
O5': (-5.978,142.642,109.956)
O3': (-2.498,144.695,109.374)
OP1: (1.777,138.554,111.952)
OP2: (2.649,140.399,110.444)
C3': (-1.662,139.303,113.922)
C1': (-2.560,139.187,111.706)
C5': (0.076,140.993,113.213)
O4': (-1.725,140.315,111.787)
C8: (-0.966,137.800,110.252)
O2': (-3.983,138.508,113.489)
C6: (-2.852,136.950,107.425)
C5: (-2.233,137.351,108.610)
C4: (-2.998,138.078,109.498)
P: (2.052,139.987,111.734)
C4': (-1.376,140.582,113.157)
C2': (-2.647,138.500,113.062)
C2: (-4.760,137.974,108.203)
N1: (-4.148,137.272,107.254)
N3: (-4.284,138.429,109.348)
N6: (-2.232,136.284,106.461)
N7: (-0.953,137.170,109.099)
N9: (-2.170,138.380,110.551)
O5': (0.689,140.800,111.926)
O3': (-2.082,139.602,115.276)
OP2: (2.649,140.399,110.444)
C3': (-1.662,139.303,113.922)
C1': (-2.560,139.187,111.706)
C5': (0.076,140.993,113.213)
O4': (-1.725,140.315,111.787)
C8: (-0.966,137.800,110.252)
O2': (-3.983,138.508,113.489)
C6: (-2.852,136.950,107.425)
C5: (-2.233,137.351,108.610)
C4: (-2.998,138.078,109.498)
P: (2.052,139.987,111.734)
C4': (-1.376,140.582,113.157)
C2': (-2.647,138.500,113.062)
C2: (-4.760,137.974,108.203)
N1: (-4.148,137.272,107.254)
N3: (-4.284,138.429,109.348)
N6: (-2.232,136.284,106.461)
N7: (-0.953,137.170,109.099)
N9: (-2.170,138.380,110.551)
O5': (0.689,140.800,111.926)
O3': (-2.082,139.602,115.276)
Image (generated by PyMOL):