ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:B113:B12

Extra

PDB:
ATOM 1 O3' C A 112 54.600 30.037 112.921 1.00 47.82 O
ATOM 2 P G A 113 54.086 29.238 111.619 1.00 47.68 P
ATOM 3 OP1 G A 113 53.095 28.234 112.056 1.00 47.71 O
ATOM 4 OP2 G A 113 55.257 28.819 110.799 1.00 45.69 O
ATOM 5 O5' G A 113 53.285 30.336 110.807 1.00 47.31 O
ATOM 6 C5' G A 113 52.399 29.965 109.749 1.00 47.27 C
ATOM 7 C4' G A 113 51.545 31.144 109.372 1.00 48.09 C
ATOM 8 O4' G A 113 52.394 32.240 108.944 1.00 46.77 O
ATOM 9 C3' G A 113 50.605 30.924 108.204 1.00 48.80 C
ATOM 10 O3' G A 113 49.425 30.267 108.637 1.00 51.08 O
ATOM 11 C2' G A 113 50.359 32.348 107.722 1.00 46.78 C
ATOM 12 O2' G A 113 49.435 33.071 108.512 1.00 45.61 O
ATOM 13 C1' G A 113 51.752 32.956 107.904 1.00 45.98 C
ATOM 14 N9 G A 113 52.554 32.828 106.691 1.00 43.89 N
ATOM 15 C8 G A 113 53.628 32.006 106.468 1.00 43.94 C
ATOM 16 N7 G A 113 54.135 32.139 105.274 1.00 41.65 N
ATOM 17 C5 G A 113 53.349 33.102 104.675 1.00 42.23 C
ATOM 18 C6 G A 113 53.426 33.671 103.382 1.00 42.06 C
ATOM 19 O6 G A 113 54.243 33.431 102.485 1.00 41.13 O
ATOM 20 N1 G A 113 52.420 34.615 103.173 1.00 41.38 N
ATOM 21 C2 G A 113 51.465 34.965 104.092 1.00 41.78 C
ATOM 22 N2 G A 113 50.566 35.859 103.701 1.00 39.80 N
ATOM 23 N3 G A 113 51.396 34.456 105.313 1.00 44.22 N
ATOM 24 C4 G A 113 52.364 33.532 105.532 1.00 43.58 C
ATOM 25 P C A 114 48.704 29.199 107.677 1.00 52.61 P
ATOM 26 OP1 C A 114 47.776 28.440 108.541 1.00 54.57 O
ATOM 27 OP2 C A 114 49.701 28.472 106.836 1.00 52.16 O
ATOM 28 O5' C A 114 47.817 30.092 106.713 1.00 50.17 O
TER

ATOM 1 O3' C B 11 52.710 37.072 111.405 1.00 50.36 O
ATOM 2 P A B 12 54.182 36.626 111.831 1.00 51.65 P
ATOM 3 OP1 A B 12 54.126 35.610 112.905 1.00 52.20 O
ATOM 4 OP2 A B 12 54.950 37.877 112.058 1.00 52.88 O
ATOM 5 O5' A B 12 54.715 35.896 110.525 1.00 47.89 O
ATOM 6 C5' A B 12 54.601 34.480 110.401 1.00 46.92 C
ATOM 7 C4' A B 12 55.295 34.014 109.153 1.00 45.33 C
ATOM 8 O4' A B 12 54.506 34.386 107.994 1.00 45.10 O
ATOM 9 C3' A B 12 56.690 34.580 108.909 1.00 44.75 C
ATOM 10 O3' A B 12 57.434 33.597 108.204 1.00 43.78 O
ATOM 11 C2' A B 12 56.397 35.726 107.952 1.00 45.00 C
ATOM 12 O2' A B 12 57.465 36.124 107.123 1.00 46.24 O
ATOM 13 C1' A B 12 55.322 35.084 107.092 1.00 45.11 C
ATOM 14 N9 A B 12 54.514 36.043 106.355 1.00 45.35 N
ATOM 15 C8 A B 12 53.392 36.744 106.727 1.00 44.80 C
ATOM 16 N7 A B 12 52.932 37.533 105.789 1.00 42.80 N
ATOM 17 C5 A B 12 53.805 37.333 104.730 1.00 44.62 C
ATOM 18 C6 A B 12 53.862 37.870 103.438 1.00 45.16 C
ATOM 19 N6 A B 12 52.978 38.747 102.966 1.00 43.61 N
ATOM 20 N1 A B 12 54.872 37.467 102.631 1.00 45.90 N
ATOM 21 C2 A B 12 55.753 36.572 103.102 1.00 46.41 C
ATOM 22 N3 A B 12 55.798 35.986 104.294 1.00 45.57 N
ATOM 23 C4 A B 12 54.785 36.419 105.068 1.00 45.20 C
ATOM 24 P G B 13 58.799 33.026 108.817 1.00 44.90 P
ATOM 25 OP1 G B 13 59.129 31.839 107.988 1.00 44.05 O
ATOM 26 OP2 G B 13 58.623 32.876 110.278 1.00 44.17 O
ATOM 27 O5' G B 13 59.888 34.171 108.567 1.00 46.50 O
TER

Atoms:
OP1: (53.095,28.234,112.056)
OP2: (55.257,28.819,110.799)
C3': (50.605,30.924,108.204)
C1': (51.752,32.956,107.904)
C5': (52.399,29.965,109.749)
O6: (54.243,33.431,102.485)
O4': (52.394,32.240,108.944)
C8: (53.628,32.006,106.468)
C2: (51.465,34.965,104.092)
C6: (53.426,33.671,103.382)
C5: (53.349,33.102,104.675)
C4: (52.364,33.532,105.532)
P: (54.086,29.238,111.619)
C4': (51.545,31.144,109.372)
C2': (50.359,32.348,107.722)
O2': (49.435,33.071,108.512)
N1: (52.420,34.615,103.173)
N2: (50.566,35.859,103.701)
N3: (51.396,34.456,105.313)
N7: (54.135,32.139,105.274)
N9: (52.554,32.828,106.691)
O5': (53.285,30.336,110.807)
O3': (49.425,30.267,108.637)
OP1: (54.126,35.610,112.905)
OP2: (54.950,37.877,112.058)
C3': (56.690,34.580,108.909)
C1': (55.322,35.084,107.092)
C5': (54.601,34.480,110.401)
O4': (54.506,34.386,107.994)
C8: (53.392,36.744,106.727)
O2': (57.465,36.124,107.123)
C6: (53.862,37.870,103.438)
C5: (53.805,37.333,104.730)
C4: (54.785,36.419,105.068)
P: (54.182,36.626,111.831)
C4': (55.295,34.014,109.153)
C2': (56.397,35.726,107.952)
C2: (55.753,36.572,103.102)
N1: (54.872,37.467,102.631)
N3: (55.798,35.986,104.294)
N6: (52.978,38.747,102.966)
N7: (52.932,37.533,105.789)
N9: (54.514,36.043,106.355)
O5': (54.715,35.896,110.525)
O3': (57.434,33.597,108.204)
Image (generated by PyMOL):
PyMOL image
show in jmol