Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1252:A1250
Extra
PDB:
ATOM 1 O3' A A1251 -28.478 -54.705 3.853 1.00 17.88 O
ATOM 2 P G A1252 -27.626 -54.492 5.198 1.00 31.11 P
ATOM 3 OP1 G A1252 -27.322 -55.846 5.730 1.00 26.11 O
ATOM 4 OP2 G A1252 -28.322 -53.508 6.059 1.00 26.11 O
ATOM 5 O5' G A1252 -26.268 -53.859 4.676 1.00 0.79 O
ATOM 6 C5' G A1252 -25.457 -54.580 3.736 1.00 0.79 C
ATOM 7 C4' G A1252 -24.072 -54.001 3.704 1.00 0.79 C
ATOM 8 O4' G A1252 -24.086 -52.732 3.009 1.00 0.79 O
ATOM 9 C3' G A1252 -23.520 -53.708 5.088 1.00 0.79 C
ATOM 10 O3' G A1252 -22.935 -54.884 5.648 1.00 0.79 O
ATOM 11 C2' G A1252 -22.552 -52.556 4.833 1.00 0.79 C
ATOM 12 O2' G A1252 -21.257 -52.964 4.417 1.00 0.79 O
ATOM 13 C1' G A1252 -23.267 -51.805 3.701 1.00 0.79 C
ATOM 14 N9 G A1252 -24.128 -50.732 4.188 1.00 1.22 N
ATOM 15 C8 G A1252 -25.497 -50.685 4.135 1.00 1.22 C
ATOM 16 N7 G A1252 -25.990 -49.607 4.668 1.00 1.22 N
ATOM 17 C5 G A1252 -24.880 -48.910 5.106 1.00 1.22 C
ATOM 18 C6 G A1252 -24.796 -47.701 5.779 1.00 1.22 C
ATOM 19 O6 G A1252 -25.710 -46.982 6.172 1.00 1.22 O
ATOM 20 N1 G A1252 -23.488 -47.336 6.008 1.00 1.22 N
ATOM 21 C2 G A1252 -22.397 -48.063 5.645 1.00 1.22 C
ATOM 22 N2 G A1252 -21.194 -47.519 5.916 1.00 1.22 N
ATOM 23 N3 G A1252 -22.466 -49.228 5.047 1.00 1.22 N
ATOM 24 C4 G A1252 -23.729 -49.582 4.803 1.00 1.22 C
ATOM 25 P C A1253 -22.612 -54.944 7.214 1.00 18.02 P
ATOM 26 OP1 C A1253 -22.120 -56.294 7.543 1.00 39.88 O
ATOM 27 OP2 C A1253 -23.768 -54.388 7.962 1.00 39.78 O
ATOM 28 O5' C A1253 -21.374 -53.960 7.348 1.00 10.38 O
TER
ATOM 1 O3' U B1249 -30.815 -43.831 0.938 1.00 33.89 O
ATOM 2 P A B1250 -31.652 -45.178 1.036 1.00 20.66 P
ATOM 3 OP1 A B1250 -32.059 -45.506 -0.356 1.00 17.64 O
ATOM 4 OP2 A B1250 -32.698 -45.027 2.075 1.00 17.64 O
ATOM 5 O5' A B1250 -30.559 -46.233 1.499 1.00 61.34 O
ATOM 6 C5' A B1250 -30.750 -47.064 2.650 1.00 61.34 C
ATOM 7 C4' A B1250 -30.493 -48.493 2.271 1.00 61.34 C
ATOM 8 O4' A B1250 -29.322 -48.533 1.424 1.00 61.34 O
ATOM 9 C3' A B1250 -30.210 -49.490 3.384 1.00 61.34 C
ATOM 10 O3' A B1250 -31.425 -49.925 4.056 1.00 61.34 O
ATOM 11 C2' A B1250 -29.391 -50.570 2.677 1.00 61.34 C
ATOM 12 O2' A B1250 -30.242 -51.463 2.009 1.00 61.34 O
ATOM 13 C1' A B1250 -28.693 -49.781 1.567 1.00 61.34 C
ATOM 14 N9 A B1250 -27.231 -49.632 1.525 1.00 24.21 N
ATOM 15 C8 A B1250 -26.362 -50.602 1.088 1.00 24.21 C
ATOM 16 N7 A B1250 -25.109 -50.221 1.053 1.00 24.21 N
ATOM 17 C5 A B1250 -25.143 -48.922 1.520 1.00 24.21 C
ATOM 18 C6 A B1250 -24.136 -47.989 1.724 1.00 24.21 C
ATOM 19 N6 A B1250 -22.857 -48.244 1.499 1.00 24.21 N
ATOM 20 N1 A B1250 -24.484 -46.773 2.181 1.00 24.21 N
ATOM 21 C2 A B1250 -25.771 -46.532 2.432 1.00 24.21 C
ATOM 22 N3 A B1250 -26.823 -47.343 2.298 1.00 24.21 N
ATOM 23 C4 A B1250 -26.438 -48.542 1.826 1.00 24.21 C
ATOM 24 P A B1251 -32.593 -50.748 3.271 1.00 26.12 P
ATOM 25 OP1 A B1251 -32.713 -50.269 1.862 1.00 29.70 O
ATOM 26 OP2 A B1251 -33.793 -50.766 4.141 1.00 29.70 O
ATOM 27 O5' A B1251 -32.086 -52.252 3.233 1.00 17.88 O
TER
ATOM 2 P G A1252 -27.626 -54.492 5.198 1.00 31.11 P
ATOM 3 OP1 G A1252 -27.322 -55.846 5.730 1.00 26.11 O
ATOM 4 OP2 G A1252 -28.322 -53.508 6.059 1.00 26.11 O
ATOM 5 O5' G A1252 -26.268 -53.859 4.676 1.00 0.79 O
ATOM 6 C5' G A1252 -25.457 -54.580 3.736 1.00 0.79 C
ATOM 7 C4' G A1252 -24.072 -54.001 3.704 1.00 0.79 C
ATOM 8 O4' G A1252 -24.086 -52.732 3.009 1.00 0.79 O
ATOM 9 C3' G A1252 -23.520 -53.708 5.088 1.00 0.79 C
ATOM 10 O3' G A1252 -22.935 -54.884 5.648 1.00 0.79 O
ATOM 11 C2' G A1252 -22.552 -52.556 4.833 1.00 0.79 C
ATOM 12 O2' G A1252 -21.257 -52.964 4.417 1.00 0.79 O
ATOM 13 C1' G A1252 -23.267 -51.805 3.701 1.00 0.79 C
ATOM 14 N9 G A1252 -24.128 -50.732 4.188 1.00 1.22 N
ATOM 15 C8 G A1252 -25.497 -50.685 4.135 1.00 1.22 C
ATOM 16 N7 G A1252 -25.990 -49.607 4.668 1.00 1.22 N
ATOM 17 C5 G A1252 -24.880 -48.910 5.106 1.00 1.22 C
ATOM 18 C6 G A1252 -24.796 -47.701 5.779 1.00 1.22 C
ATOM 19 O6 G A1252 -25.710 -46.982 6.172 1.00 1.22 O
ATOM 20 N1 G A1252 -23.488 -47.336 6.008 1.00 1.22 N
ATOM 21 C2 G A1252 -22.397 -48.063 5.645 1.00 1.22 C
ATOM 22 N2 G A1252 -21.194 -47.519 5.916 1.00 1.22 N
ATOM 23 N3 G A1252 -22.466 -49.228 5.047 1.00 1.22 N
ATOM 24 C4 G A1252 -23.729 -49.582 4.803 1.00 1.22 C
ATOM 25 P C A1253 -22.612 -54.944 7.214 1.00 18.02 P
ATOM 26 OP1 C A1253 -22.120 -56.294 7.543 1.00 39.88 O
ATOM 27 OP2 C A1253 -23.768 -54.388 7.962 1.00 39.78 O
ATOM 28 O5' C A1253 -21.374 -53.960 7.348 1.00 10.38 O
TER
ATOM 1 O3' U B1249 -30.815 -43.831 0.938 1.00 33.89 O
ATOM 2 P A B1250 -31.652 -45.178 1.036 1.00 20.66 P
ATOM 3 OP1 A B1250 -32.059 -45.506 -0.356 1.00 17.64 O
ATOM 4 OP2 A B1250 -32.698 -45.027 2.075 1.00 17.64 O
ATOM 5 O5' A B1250 -30.559 -46.233 1.499 1.00 61.34 O
ATOM 6 C5' A B1250 -30.750 -47.064 2.650 1.00 61.34 C
ATOM 7 C4' A B1250 -30.493 -48.493 2.271 1.00 61.34 C
ATOM 8 O4' A B1250 -29.322 -48.533 1.424 1.00 61.34 O
ATOM 9 C3' A B1250 -30.210 -49.490 3.384 1.00 61.34 C
ATOM 10 O3' A B1250 -31.425 -49.925 4.056 1.00 61.34 O
ATOM 11 C2' A B1250 -29.391 -50.570 2.677 1.00 61.34 C
ATOM 12 O2' A B1250 -30.242 -51.463 2.009 1.00 61.34 O
ATOM 13 C1' A B1250 -28.693 -49.781 1.567 1.00 61.34 C
ATOM 14 N9 A B1250 -27.231 -49.632 1.525 1.00 24.21 N
ATOM 15 C8 A B1250 -26.362 -50.602 1.088 1.00 24.21 C
ATOM 16 N7 A B1250 -25.109 -50.221 1.053 1.00 24.21 N
ATOM 17 C5 A B1250 -25.143 -48.922 1.520 1.00 24.21 C
ATOM 18 C6 A B1250 -24.136 -47.989 1.724 1.00 24.21 C
ATOM 19 N6 A B1250 -22.857 -48.244 1.499 1.00 24.21 N
ATOM 20 N1 A B1250 -24.484 -46.773 2.181 1.00 24.21 N
ATOM 21 C2 A B1250 -25.771 -46.532 2.432 1.00 24.21 C
ATOM 22 N3 A B1250 -26.823 -47.343 2.298 1.00 24.21 N
ATOM 23 C4 A B1250 -26.438 -48.542 1.826 1.00 24.21 C
ATOM 24 P A B1251 -32.593 -50.748 3.271 1.00 26.12 P
ATOM 25 OP1 A B1251 -32.713 -50.269 1.862 1.00 29.70 O
ATOM 26 OP2 A B1251 -33.793 -50.766 4.141 1.00 29.70 O
ATOM 27 O5' A B1251 -32.086 -52.252 3.233 1.00 17.88 O
TER
Atoms:
OP1: (-27.322,-55.846,5.730)
OP2: (-28.322,-53.508,6.059)
C3': (-23.520,-53.708,5.088)
C1': (-23.267,-51.805,3.701)
C5': (-25.457,-54.580,3.736)
O6: (-25.710,-46.982,6.172)
O4': (-24.086,-52.732,3.009)
C8: (-25.497,-50.685,4.135)
C2: (-22.397,-48.063,5.645)
C6: (-24.796,-47.701,5.779)
C5: (-24.880,-48.910,5.106)
C4: (-23.729,-49.582,4.803)
P: (-27.626,-54.492,5.198)
C4': (-24.072,-54.001,3.704)
C2': (-22.552,-52.556,4.833)
O2': (-21.257,-52.964,4.417)
N1: (-23.488,-47.336,6.008)
N2: (-21.194,-47.519,5.916)
N3: (-22.466,-49.228,5.047)
N7: (-25.990,-49.607,4.668)
N9: (-24.128,-50.732,4.188)
O5': (-26.268,-53.859,4.676)
O3': (-22.935,-54.884,5.648)
OP2: (-28.322,-53.508,6.059)
C3': (-23.520,-53.708,5.088)
C1': (-23.267,-51.805,3.701)
C5': (-25.457,-54.580,3.736)
O6: (-25.710,-46.982,6.172)
O4': (-24.086,-52.732,3.009)
C8: (-25.497,-50.685,4.135)
C2: (-22.397,-48.063,5.645)
C6: (-24.796,-47.701,5.779)
C5: (-24.880,-48.910,5.106)
C4: (-23.729,-49.582,4.803)
P: (-27.626,-54.492,5.198)
C4': (-24.072,-54.001,3.704)
C2': (-22.552,-52.556,4.833)
O2': (-21.257,-52.964,4.417)
N1: (-23.488,-47.336,6.008)
N2: (-21.194,-47.519,5.916)
N3: (-22.466,-49.228,5.047)
N7: (-25.990,-49.607,4.668)
N9: (-24.128,-50.732,4.188)
O5': (-26.268,-53.859,4.676)
O3': (-22.935,-54.884,5.648)
OP1: (-32.059,-45.506,-0.356)
OP2: (-32.698,-45.027,2.075)
C3': (-30.210,-49.490,3.384)
C1': (-28.693,-49.781,1.567)
C5': (-30.750,-47.064,2.650)
O4': (-29.322,-48.533,1.424)
C8: (-26.362,-50.602,1.088)
O2': (-30.242,-51.463,2.009)
C6: (-24.136,-47.989,1.724)
C5: (-25.143,-48.922,1.520)
C4: (-26.438,-48.542,1.826)
P: (-31.652,-45.178,1.036)
C4': (-30.493,-48.493,2.271)
C2': (-29.391,-50.570,2.677)
C2: (-25.771,-46.532,2.432)
N1: (-24.484,-46.773,2.181)
N3: (-26.823,-47.343,2.298)
N6: (-22.857,-48.244,1.499)
N7: (-25.109,-50.221,1.053)
N9: (-27.231,-49.632,1.525)
O5': (-30.559,-46.233,1.499)
O3': (-31.425,-49.925,4.056)
OP2: (-32.698,-45.027,2.075)
C3': (-30.210,-49.490,3.384)
C1': (-28.693,-49.781,1.567)
C5': (-30.750,-47.064,2.650)
O4': (-29.322,-48.533,1.424)
C8: (-26.362,-50.602,1.088)
O2': (-30.242,-51.463,2.009)
C6: (-24.136,-47.989,1.724)
C5: (-25.143,-48.922,1.520)
C4: (-26.438,-48.542,1.826)
P: (-31.652,-45.178,1.036)
C4': (-30.493,-48.493,2.271)
C2': (-29.391,-50.570,2.677)
C2: (-25.771,-46.532,2.432)
N1: (-24.484,-46.773,2.181)
N3: (-26.823,-47.343,2.298)
N6: (-22.857,-48.244,1.499)
N7: (-25.109,-50.221,1.053)
N9: (-27.231,-49.632,1.525)
O5': (-30.559,-46.233,1.499)
O3': (-31.425,-49.925,4.056)
Image (generated by PyMOL):