ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OEU:B8:A12

Extra

PDB:
ATOM 1 O3' U A 7 -24.846 -0.019 -13.827 1.00 44.96 O
ATOM 2 P G A 8 -24.907 0.025 -12.228 1.00 46.74 P
ATOM 3 OP1 G A 8 -26.351 -0.125 -11.932 1.00 46.31 O
ATOM 4 OP2 G A 8 -24.083 1.134 -11.715 1.00 42.64 O
ATOM 5 O5' G A 8 -24.155 -1.301 -11.756 1.00 45.82 O
ATOM 6 C5' G A 8 -24.849 -2.569 -11.743 1.00 44.48 C
ATOM 7 C4' G A 8 -23.876 -3.682 -11.412 1.00 42.53 C
ATOM 8 O4' G A 8 -22.860 -3.779 -12.446 1.00 40.78 O
ATOM 9 C3' G A 8 -23.074 -3.548 -10.133 1.00 42.02 C
ATOM 10 O3' G A 8 -23.853 -3.945 -9.031 1.00 46.05 O
ATOM 11 C2' G A 8 -21.980 -4.578 -10.430 1.00 41.97 C
ATOM 12 O2' G A 8 -22.372 -5.939 -10.343 1.00 41.16 O
ATOM 13 C1' G A 8 -21.644 -4.209 -11.872 1.00 41.11 C
ATOM 14 N9 G A 8 -20.632 -3.144 -11.957 1.00 39.79 N
ATOM 15 C8 G A 8 -20.814 -1.801 -12.172 1.00 41.16 C
ATOM 16 N7 G A 8 -19.701 -1.110 -12.192 1.00 39.97 N
ATOM 17 C5 G A 8 -18.719 -2.065 -12.022 1.00 39.68 C
ATOM 18 C6 G A 8 -17.317 -1.917 -11.968 1.00 41.55 C
ATOM 19 O6 G A 8 -16.658 -0.855 -12.064 1.00 41.68 O
ATOM 20 N1 G A 8 -16.673 -3.147 -11.757 1.00 40.36 N
ATOM 21 C2 G A 8 -17.309 -4.368 -11.634 1.00 40.95 C
ATOM 22 N2 G A 8 -16.521 -5.431 -11.427 1.00 39.69 N
ATOM 23 N3 G A 8 -18.638 -4.522 -11.690 1.00 38.74 N
ATOM 24 C4 G A 8 -19.275 -3.325 -11.868 1.00 39.87 C
ATOM 25 P G A 9 -23.628 -3.348 -7.556 1.00 47.86 P
ATOM 26 OP1 G A 9 -24.769 -3.802 -6.716 1.00 49.90 O
ATOM 27 OP2 G A 9 -23.225 -1.929 -7.683 1.00 49.35 O
ATOM 28 O5' G A 9 -22.381 -4.191 -7.049 1.00 47.14 O
TER

ATOM 1 O3' C B 11 -9.088 -7.234 -12.542 1.00 43.17 O
ATOM 2 P A B 12 -9.163 -7.376 -14.131 1.00 43.99 P
ATOM 3 OP1 A B 12 -8.330 -8.555 -14.492 1.00 44.85 O
ATOM 4 OP2 A B 12 -8.964 -6.046 -14.723 1.00 44.00 O
ATOM 5 O5' A B 12 -10.702 -7.732 -14.399 1.00 42.88 O
ATOM 6 C5' A B 12 -11.251 -8.932 -13.910 1.00 39.37 C
ATOM 7 C4' A B 12 -12.714 -9.008 -14.301 1.00 39.99 C
ATOM 8 O4' A B 12 -13.517 -8.093 -13.503 1.00 39.56 O
ATOM 9 C3' A B 12 -13.015 -8.614 -15.740 1.00 39.42 C
ATOM 10 O3' A B 12 -12.795 -9.720 -16.613 1.00 40.00 O
ATOM 11 C2' A B 12 -14.493 -8.266 -15.631 1.00 38.67 C
ATOM 12 O2' A B 12 -15.321 -9.400 -15.563 1.00 35.99 O
ATOM 13 C1' A B 12 -14.540 -7.534 -14.298 1.00 37.55 C
ATOM 14 N9 A B 12 -14.298 -6.102 -14.415 1.00 36.92 N
ATOM 15 C8 A B 12 -13.097 -5.432 -14.298 1.00 34.88 C
ATOM 16 N7 A B 12 -13.224 -4.130 -14.458 1.00 36.49 N
ATOM 17 C5 A B 12 -14.589 -3.942 -14.682 1.00 36.54 C
ATOM 18 C6 A B 12 -15.378 -2.795 -14.926 1.00 37.82 C
ATOM 19 N6 A B 12 -14.879 -1.537 -14.972 1.00 36.78 N
ATOM 20 N1 A B 12 -16.707 -2.989 -15.114 1.00 37.13 N
ATOM 21 C2 A B 12 -17.218 -4.212 -15.060 1.00 35.41 C
ATOM 22 N3 A B 12 -16.572 -5.358 -14.844 1.00 36.08 N
ATOM 23 C4 A B 12 -15.258 -5.152 -14.661 1.00 35.99 C
ATOM 24 P G B 13 -12.417 -9.483 -18.146 1.00 41.92 P
ATOM 25 OP1 G B 13 -12.459 -10.781 -18.817 1.00 41.32 O
ATOM 26 OP2 G B 13 -11.162 -8.714 -18.180 1.00 44.46 O
ATOM 27 O5' G B 13 -13.527 -8.452 -18.668 1.00 40.09 O
TER

Atoms:
OP1: (-26.351,-0.125,-11.932)
OP2: (-24.083,1.134,-11.715)
C3': (-23.074,-3.548,-10.133)
C1': (-21.644,-4.209,-11.872)
C5': (-24.849,-2.569,-11.743)
O6: (-16.658,-0.855,-12.064)
O4': (-22.860,-3.779,-12.446)
C8: (-20.814,-1.801,-12.172)
C2: (-17.309,-4.368,-11.634)
C6: (-17.317,-1.917,-11.968)
C5: (-18.719,-2.065,-12.022)
C4: (-19.275,-3.325,-11.868)
P: (-24.907,0.025,-12.228)
C4': (-23.876,-3.682,-11.412)
C2': (-21.980,-4.578,-10.430)
O2': (-22.372,-5.939,-10.343)
N1: (-16.673,-3.147,-11.757)
N2: (-16.521,-5.431,-11.427)
N3: (-18.638,-4.522,-11.690)
N7: (-19.701,-1.110,-12.192)
N9: (-20.632,-3.144,-11.957)
O5': (-24.155,-1.301,-11.756)
O3': (-23.853,-3.945,-9.031)
OP1: (-8.330,-8.555,-14.492)
OP2: (-8.964,-6.046,-14.723)
C3': (-13.015,-8.614,-15.740)
C1': (-14.540,-7.534,-14.298)
C5': (-11.251,-8.932,-13.910)
O4': (-13.517,-8.093,-13.503)
C8: (-13.097,-5.432,-14.298)
O2': (-15.321,-9.400,-15.563)
C6: (-15.378,-2.795,-14.926)
C5: (-14.589,-3.942,-14.682)
C4: (-15.258,-5.152,-14.661)
P: (-9.163,-7.376,-14.131)
C4': (-12.714,-9.008,-14.301)
C2': (-14.493,-8.266,-15.631)
C2: (-17.218,-4.212,-15.060)
N1: (-16.707,-2.989,-15.114)
N3: (-16.572,-5.358,-14.844)
N6: (-14.879,-1.537,-14.972)
N7: (-13.224,-4.130,-14.458)
N9: (-14.298,-6.102,-14.415)
O5': (-10.702,-7.732,-14.399)
O3': (-12.795,-9.720,-16.613)
Image (generated by PyMOL):
PyMOL image
show in jmol