Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A1051:A1079
Extra
PDB:
ATOM 1 O3' U A1050 171.072 141.571 -0.861 1.00 73.60 O
ATOM 2 P G A1051 170.230 140.522 -1.733 1.00 73.64 P
ATOM 3 OP1 G A1051 168.790 140.668 -1.346 1.00 74.89 O
ATOM 4 OP2 G A1051 170.895 139.203 -1.593 1.00 72.12 O
ATOM 5 O5' G A1051 170.379 141.070 -3.209 1.00 70.71 O
ATOM 6 C5' G A1051 169.843 142.340 -3.544 1.00 69.57 C
ATOM 7 C4' G A1051 170.344 142.787 -4.886 1.00 70.53 C
ATOM 8 O4' G A1051 171.794 142.843 -4.889 1.00 71.61 O
ATOM 9 C3' G A1051 170.023 141.896 -6.064 1.00 69.82 C
ATOM 10 O3' G A1051 168.733 142.108 -6.524 1.00 69.68 O
ATOM 11 C2' G A1051 171.063 142.326 -7.089 1.00 69.76 C
ATOM 12 O2' G A1051 170.711 143.527 -7.743 1.00 68.87 O
ATOM 13 C1' G A1051 172.275 142.583 -6.199 1.00 69.90 C
ATOM 14 N9 G A1051 173.157 141.422 -6.160 1.00 70.41 N
ATOM 15 C8 G A1051 173.381 140.566 -5.108 1.00 69.96 C
ATOM 16 N7 G A1051 174.228 139.614 -5.392 1.00 70.81 N
ATOM 17 C5 G A1051 174.587 139.856 -6.711 1.00 71.17 C
ATOM 18 C6 G A1051 175.475 139.152 -7.569 1.00 70.97 C
ATOM 19 O6 G A1051 176.155 138.145 -7.322 1.00 69.28 O
ATOM 20 N1 G A1051 175.529 139.735 -8.832 1.00 71.62 N
ATOM 21 C2 G A1051 174.830 140.855 -9.222 1.00 72.31 C
ATOM 22 N2 G A1051 175.020 141.269 -10.487 1.00 73.84 N
ATOM 23 N3 G A1051 174.006 141.521 -8.431 1.00 71.59 N
ATOM 24 C4 G A1051 173.933 140.969 -7.200 1.00 71.27 C
ATOM 25 P C A1052 167.872 140.859 -7.024 1.00 69.95 P
ATOM 26 OP1 C A1052 166.469 141.325 -7.254 1.00 67.26 O
ATOM 27 OP2 C A1052 168.184 139.764 -6.058 1.00 68.89 O
ATOM 28 O5' C A1052 168.498 140.508 -8.439 1.00 70.21 O
TER
ATOM 1 O3' A B1078 176.712 141.895 -14.991 1.00 74.93 O
ATOM 2 P A B1079 178.246 142.095 -15.396 1.00 73.84 P
ATOM 3 OP1 A B1079 178.400 141.640 -16.807 1.00 74.53 O
ATOM 4 OP2 A B1079 179.048 141.491 -14.305 1.00 71.43 O
ATOM 5 O5' A B1079 178.402 143.674 -15.403 1.00 74.83 O
ATOM 6 C5' A B1079 179.046 144.360 -14.319 1.00 75.55 C
ATOM 7 C4' A B1079 178.024 145.070 -13.467 1.00 76.26 C
ATOM 8 O4' A B1079 177.151 144.100 -12.840 1.00 74.86 O
ATOM 9 C3' A B1079 178.640 145.856 -12.324 1.00 77.36 C
ATOM 10 O3' A B1079 178.960 147.161 -12.793 1.00 79.50 O
ATOM 11 C2' A B1079 177.538 145.850 -11.269 1.00 76.57 C
ATOM 12 O2' A B1079 176.566 146.865 -11.467 1.00 77.83 O
ATOM 13 C1' A B1079 176.891 144.483 -11.504 1.00 74.62 C
ATOM 14 N9 A B1079 177.400 143.426 -10.636 1.00 71.57 N
ATOM 15 C8 A B1079 178.142 142.350 -11.026 1.00 70.99 C
ATOM 16 N7 A B1079 178.445 141.536 -10.052 1.00 71.09 N
ATOM 17 C5 A B1079 177.868 142.116 -8.939 1.00 71.07 C
ATOM 18 C6 A B1079 177.823 141.723 -7.589 1.00 72.13 C
ATOM 19 N6 A B1079 178.385 140.602 -7.128 1.00 71.67 N
ATOM 20 N1 A B1079 177.170 142.526 -6.723 1.00 71.87 N
ATOM 21 C2 A B1079 176.597 143.640 -7.197 1.00 73.56 C
ATOM 22 N3 A B1079 176.564 144.110 -8.448 1.00 73.78 N
ATOM 23 C4 A B1079 177.227 143.288 -9.280 1.00 71.79 C
ATOM 24 P C B1080 180.179 147.982 -12.140 1.00 80.61 P
ATOM 25 OP1 C B1080 180.180 149.235 -12.965 1.00 79.38 O
ATOM 26 OP2 C B1080 181.402 147.141 -12.045 1.00 80.60 O
ATOM 27 O5' C B1080 179.690 148.282 -10.658 1.00 79.64 O
TER
ATOM 2 P G A1051 170.230 140.522 -1.733 1.00 73.64 P
ATOM 3 OP1 G A1051 168.790 140.668 -1.346 1.00 74.89 O
ATOM 4 OP2 G A1051 170.895 139.203 -1.593 1.00 72.12 O
ATOM 5 O5' G A1051 170.379 141.070 -3.209 1.00 70.71 O
ATOM 6 C5' G A1051 169.843 142.340 -3.544 1.00 69.57 C
ATOM 7 C4' G A1051 170.344 142.787 -4.886 1.00 70.53 C
ATOM 8 O4' G A1051 171.794 142.843 -4.889 1.00 71.61 O
ATOM 9 C3' G A1051 170.023 141.896 -6.064 1.00 69.82 C
ATOM 10 O3' G A1051 168.733 142.108 -6.524 1.00 69.68 O
ATOM 11 C2' G A1051 171.063 142.326 -7.089 1.00 69.76 C
ATOM 12 O2' G A1051 170.711 143.527 -7.743 1.00 68.87 O
ATOM 13 C1' G A1051 172.275 142.583 -6.199 1.00 69.90 C
ATOM 14 N9 G A1051 173.157 141.422 -6.160 1.00 70.41 N
ATOM 15 C8 G A1051 173.381 140.566 -5.108 1.00 69.96 C
ATOM 16 N7 G A1051 174.228 139.614 -5.392 1.00 70.81 N
ATOM 17 C5 G A1051 174.587 139.856 -6.711 1.00 71.17 C
ATOM 18 C6 G A1051 175.475 139.152 -7.569 1.00 70.97 C
ATOM 19 O6 G A1051 176.155 138.145 -7.322 1.00 69.28 O
ATOM 20 N1 G A1051 175.529 139.735 -8.832 1.00 71.62 N
ATOM 21 C2 G A1051 174.830 140.855 -9.222 1.00 72.31 C
ATOM 22 N2 G A1051 175.020 141.269 -10.487 1.00 73.84 N
ATOM 23 N3 G A1051 174.006 141.521 -8.431 1.00 71.59 N
ATOM 24 C4 G A1051 173.933 140.969 -7.200 1.00 71.27 C
ATOM 25 P C A1052 167.872 140.859 -7.024 1.00 69.95 P
ATOM 26 OP1 C A1052 166.469 141.325 -7.254 1.00 67.26 O
ATOM 27 OP2 C A1052 168.184 139.764 -6.058 1.00 68.89 O
ATOM 28 O5' C A1052 168.498 140.508 -8.439 1.00 70.21 O
TER
ATOM 1 O3' A B1078 176.712 141.895 -14.991 1.00 74.93 O
ATOM 2 P A B1079 178.246 142.095 -15.396 1.00 73.84 P
ATOM 3 OP1 A B1079 178.400 141.640 -16.807 1.00 74.53 O
ATOM 4 OP2 A B1079 179.048 141.491 -14.305 1.00 71.43 O
ATOM 5 O5' A B1079 178.402 143.674 -15.403 1.00 74.83 O
ATOM 6 C5' A B1079 179.046 144.360 -14.319 1.00 75.55 C
ATOM 7 C4' A B1079 178.024 145.070 -13.467 1.00 76.26 C
ATOM 8 O4' A B1079 177.151 144.100 -12.840 1.00 74.86 O
ATOM 9 C3' A B1079 178.640 145.856 -12.324 1.00 77.36 C
ATOM 10 O3' A B1079 178.960 147.161 -12.793 1.00 79.50 O
ATOM 11 C2' A B1079 177.538 145.850 -11.269 1.00 76.57 C
ATOM 12 O2' A B1079 176.566 146.865 -11.467 1.00 77.83 O
ATOM 13 C1' A B1079 176.891 144.483 -11.504 1.00 74.62 C
ATOM 14 N9 A B1079 177.400 143.426 -10.636 1.00 71.57 N
ATOM 15 C8 A B1079 178.142 142.350 -11.026 1.00 70.99 C
ATOM 16 N7 A B1079 178.445 141.536 -10.052 1.00 71.09 N
ATOM 17 C5 A B1079 177.868 142.116 -8.939 1.00 71.07 C
ATOM 18 C6 A B1079 177.823 141.723 -7.589 1.00 72.13 C
ATOM 19 N6 A B1079 178.385 140.602 -7.128 1.00 71.67 N
ATOM 20 N1 A B1079 177.170 142.526 -6.723 1.00 71.87 N
ATOM 21 C2 A B1079 176.597 143.640 -7.197 1.00 73.56 C
ATOM 22 N3 A B1079 176.564 144.110 -8.448 1.00 73.78 N
ATOM 23 C4 A B1079 177.227 143.288 -9.280 1.00 71.79 C
ATOM 24 P C B1080 180.179 147.982 -12.140 1.00 80.61 P
ATOM 25 OP1 C B1080 180.180 149.235 -12.965 1.00 79.38 O
ATOM 26 OP2 C B1080 181.402 147.141 -12.045 1.00 80.60 O
ATOM 27 O5' C B1080 179.690 148.282 -10.658 1.00 79.64 O
TER
Atoms:
OP1: (168.790,140.668,-1.346)
OP2: (170.895,139.203,-1.593)
C3': (170.023,141.896,-6.064)
C1': (172.275,142.583,-6.199)
C5': (169.843,142.340,-3.544)
O6: (176.155,138.145,-7.322)
O4': (171.794,142.843,-4.889)
C8: (173.381,140.566,-5.108)
C2: (174.830,140.855,-9.222)
C6: (175.475,139.152,-7.569)
C5: (174.587,139.856,-6.711)
C4: (173.933,140.969,-7.200)
P: (170.230,140.522,-1.733)
C4': (170.344,142.787,-4.886)
C2': (171.063,142.326,-7.089)
O2': (170.711,143.527,-7.743)
N1: (175.529,139.735,-8.832)
N2: (175.020,141.269,-10.487)
N3: (174.006,141.521,-8.431)
N7: (174.228,139.614,-5.392)
N9: (173.157,141.422,-6.160)
O5': (170.379,141.070,-3.209)
O3': (168.733,142.108,-6.524)
OP2: (170.895,139.203,-1.593)
C3': (170.023,141.896,-6.064)
C1': (172.275,142.583,-6.199)
C5': (169.843,142.340,-3.544)
O6: (176.155,138.145,-7.322)
O4': (171.794,142.843,-4.889)
C8: (173.381,140.566,-5.108)
C2: (174.830,140.855,-9.222)
C6: (175.475,139.152,-7.569)
C5: (174.587,139.856,-6.711)
C4: (173.933,140.969,-7.200)
P: (170.230,140.522,-1.733)
C4': (170.344,142.787,-4.886)
C2': (171.063,142.326,-7.089)
O2': (170.711,143.527,-7.743)
N1: (175.529,139.735,-8.832)
N2: (175.020,141.269,-10.487)
N3: (174.006,141.521,-8.431)
N7: (174.228,139.614,-5.392)
N9: (173.157,141.422,-6.160)
O5': (170.379,141.070,-3.209)
O3': (168.733,142.108,-6.524)
OP1: (178.400,141.640,-16.807)
OP2: (179.048,141.491,-14.305)
C3': (178.640,145.856,-12.324)
C1': (176.891,144.483,-11.504)
C5': (179.046,144.360,-14.319)
O4': (177.151,144.100,-12.840)
C8: (178.142,142.350,-11.026)
O2': (176.566,146.865,-11.467)
C6: (177.823,141.723,-7.589)
C5: (177.868,142.116,-8.939)
C4: (177.227,143.288,-9.280)
P: (178.246,142.095,-15.396)
C4': (178.024,145.070,-13.467)
C2': (177.538,145.850,-11.269)
C2: (176.597,143.640,-7.197)
N1: (177.170,142.526,-6.723)
N3: (176.564,144.110,-8.448)
N6: (178.385,140.602,-7.128)
N7: (178.445,141.536,-10.052)
N9: (177.400,143.426,-10.636)
O5': (178.402,143.674,-15.403)
O3': (178.960,147.161,-12.793)
OP2: (179.048,141.491,-14.305)
C3': (178.640,145.856,-12.324)
C1': (176.891,144.483,-11.504)
C5': (179.046,144.360,-14.319)
O4': (177.151,144.100,-12.840)
C8: (178.142,142.350,-11.026)
O2': (176.566,146.865,-11.467)
C6: (177.823,141.723,-7.589)
C5: (177.868,142.116,-8.939)
C4: (177.227,143.288,-9.280)
P: (178.246,142.095,-15.396)
C4': (178.024,145.070,-13.467)
C2': (177.538,145.850,-11.269)
C2: (176.597,143.640,-7.197)
N1: (177.170,142.526,-6.723)
N3: (176.564,144.110,-8.448)
N6: (178.385,140.602,-7.128)
N7: (178.445,141.536,-10.052)
N9: (177.400,143.426,-10.636)
O5': (178.402,143.674,-15.403)
O3': (178.960,147.161,-12.793)
Image (generated by PyMOL):