Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1258:A1256
Extra
PDB:
ATOM 1 O3' A A1257 28.312 -54.017 -3.549 1.00 43.22 O
ATOM 2 P G A1258 27.511 -53.894 -4.932 1.00 52.20 P
ATOM 3 OP1 G A1258 27.281 -55.246 -5.527 1.00 44.33 O
ATOM 4 OP2 G A1258 28.229 -52.871 -5.709 1.00 45.01 O
ATOM 5 O5' G A1258 26.121 -53.244 -4.498 1.00 52.01 O
ATOM 6 C5' G A1258 25.184 -53.964 -3.716 1.00 48.19 C
ATOM 7 C4' G A1258 23.844 -53.309 -3.823 1.00 44.99 C
ATOM 8 O4' G A1258 23.894 -52.007 -3.185 1.00 49.69 O
ATOM 9 C3' G A1258 23.410 -53.037 -5.251 1.00 48.03 C
ATOM 10 O3' G A1258 22.836 -54.239 -5.774 1.00 50.07 O
ATOM 11 C2' G A1258 22.476 -51.835 -5.086 1.00 50.69 C
ATOM 12 O2' G A1258 21.194 -52.210 -4.611 1.00 51.01 O
ATOM 13 C1' G A1258 23.163 -51.065 -3.948 1.00 48.49 C
ATOM 14 N9 G A1258 24.091 -50.010 -4.349 1.00 46.61 N
ATOM 15 C8 G A1258 25.449 -50.023 -4.171 1.00 44.16 C
ATOM 16 N7 G A1258 26.033 -48.944 -4.607 1.00 45.96 N
ATOM 17 C5 G A1258 25.002 -48.171 -5.108 1.00 48.64 C
ATOM 18 C6 G A1258 25.038 -46.902 -5.728 1.00 49.63 C
ATOM 19 O6 G A1258 26.024 -46.167 -5.935 1.00 48.06 O
ATOM 20 N1 G A1258 23.769 -46.496 -6.133 1.00 47.95 N
ATOM 21 C2 G A1258 22.621 -47.217 -5.956 1.00 43.74 C
ATOM 22 N2 G A1258 21.508 -46.667 -6.445 1.00 39.52 N
ATOM 23 N3 G A1258 22.575 -48.397 -5.354 1.00 49.04 N
ATOM 24 C4 G A1258 23.795 -48.814 -4.963 1.00 48.43 C
ATOM 25 P C A1259 22.673 -54.431 -7.362 1.00 52.06 P
ATOM 26 OP1 C A1259 22.391 -55.861 -7.634 1.00 25.10 O
ATOM 27 OP2 C A1259 23.801 -53.761 -8.053 1.00 48.39 O
ATOM 28 O5' C A1259 21.372 -53.559 -7.648 1.00 53.98 O
TER
ATOM 1 O3' U B1255 30.853 -44.008 0.155 1.00 51.88 O
ATOM 2 P A B1256 31.971 -44.555 -0.871 1.00 42.20 P
ATOM 3 OP1 A B1256 33.248 -44.247 -0.170 1.00 61.42 O
ATOM 4 OP2 A B1256 31.801 -44.111 -2.283 1.00 34.87 O
ATOM 5 O5' A B1256 31.676 -46.140 -0.903 1.00 43.74 O
ATOM 6 C5' A B1256 30.396 -46.636 -1.332 1.00 47.98 C
ATOM 7 C4' A B1256 30.360 -48.158 -1.450 1.00 45.78 C
ATOM 8 O4' A B1256 29.103 -48.622 -0.889 1.00 46.13 O
ATOM 9 C3' A B1256 30.388 -48.712 -2.878 1.00 48.12 C
ATOM 10 O3' A B1256 30.844 -50.070 -2.844 1.00 52.44 O
ATOM 11 C2' A B1256 28.911 -48.846 -3.225 1.00 46.47 C
ATOM 12 O2' A B1256 28.726 -49.842 -4.213 1.00 48.32 O
ATOM 13 C1' A B1256 28.345 -49.293 -1.878 1.00 46.07 C
ATOM 14 N9 A B1256 26.915 -49.090 -1.603 1.00 49.25 N
ATOM 15 C8 A B1256 26.122 -50.012 -0.971 1.00 51.36 C
ATOM 16 N7 A B1256 24.898 -49.606 -0.761 1.00 50.19 N
ATOM 17 C5 A B1256 24.872 -48.333 -1.301 1.00 47.54 C
ATOM 18 C6 A B1256 23.864 -47.366 -1.373 1.00 48.83 C
ATOM 19 N6 A B1256 22.643 -47.503 -0.832 1.00 53.00 N
ATOM 20 N1 A B1256 24.151 -46.222 -2.003 1.00 44.11 N
ATOM 21 C2 A B1256 25.372 -46.052 -2.494 1.00 44.40 C
ATOM 22 N3 A B1256 26.410 -46.869 -2.465 1.00 47.81 N
ATOM 23 C4 A B1256 26.096 -48.009 -1.848 1.00 47.45 C
ATOM 24 P A B1257 32.319 -50.453 -3.335 1.00 53.77 P
ATOM 25 OP1 A B1257 33.227 -49.977 -2.256 1.00 58.06 O
ATOM 26 OP2 A B1257 32.511 -49.977 -4.732 1.00 52.21 O
ATOM 27 O5' A B1257 32.282 -52.046 -3.353 1.00 46.34 O
TER
ATOM 2 P G A1258 27.511 -53.894 -4.932 1.00 52.20 P
ATOM 3 OP1 G A1258 27.281 -55.246 -5.527 1.00 44.33 O
ATOM 4 OP2 G A1258 28.229 -52.871 -5.709 1.00 45.01 O
ATOM 5 O5' G A1258 26.121 -53.244 -4.498 1.00 52.01 O
ATOM 6 C5' G A1258 25.184 -53.964 -3.716 1.00 48.19 C
ATOM 7 C4' G A1258 23.844 -53.309 -3.823 1.00 44.99 C
ATOM 8 O4' G A1258 23.894 -52.007 -3.185 1.00 49.69 O
ATOM 9 C3' G A1258 23.410 -53.037 -5.251 1.00 48.03 C
ATOM 10 O3' G A1258 22.836 -54.239 -5.774 1.00 50.07 O
ATOM 11 C2' G A1258 22.476 -51.835 -5.086 1.00 50.69 C
ATOM 12 O2' G A1258 21.194 -52.210 -4.611 1.00 51.01 O
ATOM 13 C1' G A1258 23.163 -51.065 -3.948 1.00 48.49 C
ATOM 14 N9 G A1258 24.091 -50.010 -4.349 1.00 46.61 N
ATOM 15 C8 G A1258 25.449 -50.023 -4.171 1.00 44.16 C
ATOM 16 N7 G A1258 26.033 -48.944 -4.607 1.00 45.96 N
ATOM 17 C5 G A1258 25.002 -48.171 -5.108 1.00 48.64 C
ATOM 18 C6 G A1258 25.038 -46.902 -5.728 1.00 49.63 C
ATOM 19 O6 G A1258 26.024 -46.167 -5.935 1.00 48.06 O
ATOM 20 N1 G A1258 23.769 -46.496 -6.133 1.00 47.95 N
ATOM 21 C2 G A1258 22.621 -47.217 -5.956 1.00 43.74 C
ATOM 22 N2 G A1258 21.508 -46.667 -6.445 1.00 39.52 N
ATOM 23 N3 G A1258 22.575 -48.397 -5.354 1.00 49.04 N
ATOM 24 C4 G A1258 23.795 -48.814 -4.963 1.00 48.43 C
ATOM 25 P C A1259 22.673 -54.431 -7.362 1.00 52.06 P
ATOM 26 OP1 C A1259 22.391 -55.861 -7.634 1.00 25.10 O
ATOM 27 OP2 C A1259 23.801 -53.761 -8.053 1.00 48.39 O
ATOM 28 O5' C A1259 21.372 -53.559 -7.648 1.00 53.98 O
TER
ATOM 1 O3' U B1255 30.853 -44.008 0.155 1.00 51.88 O
ATOM 2 P A B1256 31.971 -44.555 -0.871 1.00 42.20 P
ATOM 3 OP1 A B1256 33.248 -44.247 -0.170 1.00 61.42 O
ATOM 4 OP2 A B1256 31.801 -44.111 -2.283 1.00 34.87 O
ATOM 5 O5' A B1256 31.676 -46.140 -0.903 1.00 43.74 O
ATOM 6 C5' A B1256 30.396 -46.636 -1.332 1.00 47.98 C
ATOM 7 C4' A B1256 30.360 -48.158 -1.450 1.00 45.78 C
ATOM 8 O4' A B1256 29.103 -48.622 -0.889 1.00 46.13 O
ATOM 9 C3' A B1256 30.388 -48.712 -2.878 1.00 48.12 C
ATOM 10 O3' A B1256 30.844 -50.070 -2.844 1.00 52.44 O
ATOM 11 C2' A B1256 28.911 -48.846 -3.225 1.00 46.47 C
ATOM 12 O2' A B1256 28.726 -49.842 -4.213 1.00 48.32 O
ATOM 13 C1' A B1256 28.345 -49.293 -1.878 1.00 46.07 C
ATOM 14 N9 A B1256 26.915 -49.090 -1.603 1.00 49.25 N
ATOM 15 C8 A B1256 26.122 -50.012 -0.971 1.00 51.36 C
ATOM 16 N7 A B1256 24.898 -49.606 -0.761 1.00 50.19 N
ATOM 17 C5 A B1256 24.872 -48.333 -1.301 1.00 47.54 C
ATOM 18 C6 A B1256 23.864 -47.366 -1.373 1.00 48.83 C
ATOM 19 N6 A B1256 22.643 -47.503 -0.832 1.00 53.00 N
ATOM 20 N1 A B1256 24.151 -46.222 -2.003 1.00 44.11 N
ATOM 21 C2 A B1256 25.372 -46.052 -2.494 1.00 44.40 C
ATOM 22 N3 A B1256 26.410 -46.869 -2.465 1.00 47.81 N
ATOM 23 C4 A B1256 26.096 -48.009 -1.848 1.00 47.45 C
ATOM 24 P A B1257 32.319 -50.453 -3.335 1.00 53.77 P
ATOM 25 OP1 A B1257 33.227 -49.977 -2.256 1.00 58.06 O
ATOM 26 OP2 A B1257 32.511 -49.977 -4.732 1.00 52.21 O
ATOM 27 O5' A B1257 32.282 -52.046 -3.353 1.00 46.34 O
TER
Atoms:
OP1: (27.281,-55.246,-5.527)
OP2: (28.229,-52.871,-5.709)
C3': (23.410,-53.037,-5.251)
C1': (23.163,-51.065,-3.948)
C5': (25.184,-53.964,-3.716)
O6: (26.024,-46.167,-5.935)
O4': (23.894,-52.007,-3.185)
C8: (25.449,-50.023,-4.171)
C2: (22.621,-47.217,-5.956)
C6: (25.038,-46.902,-5.728)
C5: (25.002,-48.171,-5.108)
C4: (23.795,-48.814,-4.963)
P: (27.511,-53.894,-4.932)
C4': (23.844,-53.309,-3.823)
C2': (22.476,-51.835,-5.086)
O2': (21.194,-52.210,-4.611)
N1: (23.769,-46.496,-6.133)
N2: (21.508,-46.667,-6.445)
N3: (22.575,-48.397,-5.354)
N7: (26.033,-48.944,-4.607)
N9: (24.091,-50.010,-4.349)
O5': (26.121,-53.244,-4.498)
O3': (22.836,-54.239,-5.774)
OP2: (28.229,-52.871,-5.709)
C3': (23.410,-53.037,-5.251)
C1': (23.163,-51.065,-3.948)
C5': (25.184,-53.964,-3.716)
O6: (26.024,-46.167,-5.935)
O4': (23.894,-52.007,-3.185)
C8: (25.449,-50.023,-4.171)
C2: (22.621,-47.217,-5.956)
C6: (25.038,-46.902,-5.728)
C5: (25.002,-48.171,-5.108)
C4: (23.795,-48.814,-4.963)
P: (27.511,-53.894,-4.932)
C4': (23.844,-53.309,-3.823)
C2': (22.476,-51.835,-5.086)
O2': (21.194,-52.210,-4.611)
N1: (23.769,-46.496,-6.133)
N2: (21.508,-46.667,-6.445)
N3: (22.575,-48.397,-5.354)
N7: (26.033,-48.944,-4.607)
N9: (24.091,-50.010,-4.349)
O5': (26.121,-53.244,-4.498)
O3': (22.836,-54.239,-5.774)
OP1: (33.248,-44.247,-0.170)
OP2: (31.801,-44.111,-2.283)
C3': (30.388,-48.712,-2.878)
C1': (28.345,-49.293,-1.878)
C5': (30.396,-46.636,-1.332)
O4': (29.103,-48.622,-0.889)
C8: (26.122,-50.012,-0.971)
O2': (28.726,-49.842,-4.213)
C6: (23.864,-47.366,-1.373)
C5: (24.872,-48.333,-1.301)
C4: (26.096,-48.009,-1.848)
P: (31.971,-44.555,-0.871)
C4': (30.360,-48.158,-1.450)
C2': (28.911,-48.846,-3.225)
C2: (25.372,-46.052,-2.494)
N1: (24.151,-46.222,-2.003)
N3: (26.410,-46.869,-2.465)
N6: (22.643,-47.503,-0.832)
N7: (24.898,-49.606,-0.761)
N9: (26.915,-49.090,-1.603)
O5': (31.676,-46.140,-0.903)
O3': (30.844,-50.070,-2.844)
OP2: (31.801,-44.111,-2.283)
C3': (30.388,-48.712,-2.878)
C1': (28.345,-49.293,-1.878)
C5': (30.396,-46.636,-1.332)
O4': (29.103,-48.622,-0.889)
C8: (26.122,-50.012,-0.971)
O2': (28.726,-49.842,-4.213)
C6: (23.864,-47.366,-1.373)
C5: (24.872,-48.333,-1.301)
C4: (26.096,-48.009,-1.848)
P: (31.971,-44.555,-0.871)
C4': (30.360,-48.158,-1.450)
C2': (28.911,-48.846,-3.225)
C2: (25.372,-46.052,-2.494)
N1: (24.151,-46.222,-2.003)
N3: (26.410,-46.869,-2.465)
N6: (22.643,-47.503,-0.832)
N7: (24.898,-49.606,-0.761)
N9: (26.915,-49.090,-1.603)
O5': (31.676,-46.140,-0.903)
O3': (30.844,-50.070,-2.844)
Image (generated by PyMOL):