Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A335:A332
Extra
PDB:
ATOM 1 O3' A A 334 55.601-103.210 -71.979 1.00 55.11 O
ATOM 2 P G A 335 56.420-102.328 -70.875 1.00 47.03 P
ATOM 3 OP1 G A 335 55.602-102.335 -69.644 1.00 48.51 O
ATOM 4 OP2 G A 335 56.757-101.033 -71.484 1.00 42.91 O
ATOM 5 O5' G A 335 57.735-103.176 -70.644 1.00 46.15 O
ATOM 6 C5' G A 335 57.648-104.547 -70.266 1.00 51.96 C
ATOM 7 C4' G A 335 58.775-104.945 -69.358 1.00 47.10 C
ATOM 8 O4' G A 335 58.579-106.314 -68.909 1.00 48.62 O
ATOM 9 C3' G A 335 60.159-104.893 -69.993 1.00 45.71 C
ATOM 10 O3' G A 335 61.084-104.342 -69.073 1.00 46.55 O
ATOM 11 C2' G A 335 60.493-106.354 -70.223 1.00 46.82 C
ATOM 12 O2' G A 335 61.859-106.637 -70.194 1.00 50.74 O
ATOM 13 C1' G A 335 59.773-107.035 -69.079 1.00 47.29 C
ATOM 14 N9 G A 335 59.467-108.440 -69.353 1.00 47.41 N
ATOM 15 C8 G A 335 60.227-109.473 -68.904 1.00 51.27 C
ATOM 16 N7 G A 335 59.809-110.633 -69.316 1.00 60.88 N
ATOM 17 C5 G A 335 58.722-110.354 -70.118 1.00 57.19 C
ATOM 18 C6 G A 335 57.879-111.233 -70.841 1.00 59.08 C
ATOM 19 O6 G A 335 57.942-112.464 -70.903 1.00 64.01 O
ATOM 20 N1 G A 335 56.886-110.556 -71.535 1.00 56.47 N
ATOM 21 C2 G A 335 56.732-109.195 -71.523 1.00 63.00 C
ATOM 22 N2 G A 335 55.706-108.716 -72.249 1.00 60.82 N
ATOM 23 N3 G A 335 57.527-108.367 -70.853 1.00 61.60 N
ATOM 24 C4 G A 335 58.503-109.002 -70.170 1.00 53.51 C
ATOM 25 P A A 336 61.493-102.795 -69.169 1.00 53.29 P
ATOM 26 OP1 A A 336 60.735-102.208 -70.296 1.00 71.11 O
ATOM 27 OP2 A A 336 62.971-102.735 -69.191 1.00 65.01 O
ATOM 28 O5' A A 336 60.951-102.192 -67.814 1.00 53.94 O
TER
ATOM 1 O3' C B 331 51.818-111.830 -78.472 1.00 53.54 O
ATOM 2 P A B 332 52.870-111.469 -79.636 1.00 62.06 P
ATOM 3 OP1 A B 332 52.114-110.815 -80.731 1.00 59.72 O
ATOM 4 OP2 A B 332 53.629-112.697 -79.931 1.00 61.30 O
ATOM 5 O5' A B 332 53.810-110.414 -78.937 1.00 61.96 O
ATOM 6 C5' A B 332 53.280-109.249 -78.336 1.00 54.10 C
ATOM 7 C4' A B 332 54.329-108.545 -77.522 1.00 52.19 C
ATOM 8 O4' A B 332 54.680-109.349 -76.376 1.00 49.22 O
ATOM 9 C3' A B 332 55.656-108.328 -78.214 1.00 59.54 C
ATOM 10 O3' A B 332 55.640-107.220 -79.091 1.00 63.75 O
ATOM 11 C2' A B 332 56.611-108.160 -77.049 1.00 52.77 C
ATOM 12 O2' A B 332 56.474-106.866 -76.494 1.00 53.78 O
ATOM 13 C1' A B 332 56.039-109.147 -76.053 1.00 51.69 C
ATOM 14 N9 A B 332 56.732-110.446 -76.066 1.00 55.92 N
ATOM 15 C8 A B 332 56.411-111.594 -76.738 1.00 58.51 C
ATOM 16 N7 A B 332 57.193-112.620 -76.480 1.00 51.78 N
ATOM 17 C5 A B 332 58.083-112.116 -75.551 1.00 53.02 C
ATOM 18 C6 A B 332 59.162-112.688 -74.869 1.00 48.82 C
ATOM 19 N6 A B 332 59.573-113.945 -75.009 1.00 56.36 N
ATOM 20 N1 A B 332 59.829-111.915 -74.013 1.00 49.17 N
ATOM 21 C2 A B 332 59.439-110.658 -73.843 1.00 53.39 C
ATOM 22 N3 A B 332 58.448-110.001 -74.417 1.00 55.92 N
ATOM 23 C4 A B 332 57.799-110.793 -75.278 1.00 58.14 C
ATOM 24 P G B 333 55.675-107.445 -80.681 1.00 56.15 P
ATOM 25 OP1 G B 333 54.261-107.634 -81.127 1.00 95.12 O
ATOM 26 OP2 G B 333 56.650-108.524 -80.952 1.00 78.50 O
ATOM 27 O5' G B 333 56.229-106.053 -81.208 1.00 58.93 O
TER
ATOM 2 P G A 335 56.420-102.328 -70.875 1.00 47.03 P
ATOM 3 OP1 G A 335 55.602-102.335 -69.644 1.00 48.51 O
ATOM 4 OP2 G A 335 56.757-101.033 -71.484 1.00 42.91 O
ATOM 5 O5' G A 335 57.735-103.176 -70.644 1.00 46.15 O
ATOM 6 C5' G A 335 57.648-104.547 -70.266 1.00 51.96 C
ATOM 7 C4' G A 335 58.775-104.945 -69.358 1.00 47.10 C
ATOM 8 O4' G A 335 58.579-106.314 -68.909 1.00 48.62 O
ATOM 9 C3' G A 335 60.159-104.893 -69.993 1.00 45.71 C
ATOM 10 O3' G A 335 61.084-104.342 -69.073 1.00 46.55 O
ATOM 11 C2' G A 335 60.493-106.354 -70.223 1.00 46.82 C
ATOM 12 O2' G A 335 61.859-106.637 -70.194 1.00 50.74 O
ATOM 13 C1' G A 335 59.773-107.035 -69.079 1.00 47.29 C
ATOM 14 N9 G A 335 59.467-108.440 -69.353 1.00 47.41 N
ATOM 15 C8 G A 335 60.227-109.473 -68.904 1.00 51.27 C
ATOM 16 N7 G A 335 59.809-110.633 -69.316 1.00 60.88 N
ATOM 17 C5 G A 335 58.722-110.354 -70.118 1.00 57.19 C
ATOM 18 C6 G A 335 57.879-111.233 -70.841 1.00 59.08 C
ATOM 19 O6 G A 335 57.942-112.464 -70.903 1.00 64.01 O
ATOM 20 N1 G A 335 56.886-110.556 -71.535 1.00 56.47 N
ATOM 21 C2 G A 335 56.732-109.195 -71.523 1.00 63.00 C
ATOM 22 N2 G A 335 55.706-108.716 -72.249 1.00 60.82 N
ATOM 23 N3 G A 335 57.527-108.367 -70.853 1.00 61.60 N
ATOM 24 C4 G A 335 58.503-109.002 -70.170 1.00 53.51 C
ATOM 25 P A A 336 61.493-102.795 -69.169 1.00 53.29 P
ATOM 26 OP1 A A 336 60.735-102.208 -70.296 1.00 71.11 O
ATOM 27 OP2 A A 336 62.971-102.735 -69.191 1.00 65.01 O
ATOM 28 O5' A A 336 60.951-102.192 -67.814 1.00 53.94 O
TER
ATOM 1 O3' C B 331 51.818-111.830 -78.472 1.00 53.54 O
ATOM 2 P A B 332 52.870-111.469 -79.636 1.00 62.06 P
ATOM 3 OP1 A B 332 52.114-110.815 -80.731 1.00 59.72 O
ATOM 4 OP2 A B 332 53.629-112.697 -79.931 1.00 61.30 O
ATOM 5 O5' A B 332 53.810-110.414 -78.937 1.00 61.96 O
ATOM 6 C5' A B 332 53.280-109.249 -78.336 1.00 54.10 C
ATOM 7 C4' A B 332 54.329-108.545 -77.522 1.00 52.19 C
ATOM 8 O4' A B 332 54.680-109.349 -76.376 1.00 49.22 O
ATOM 9 C3' A B 332 55.656-108.328 -78.214 1.00 59.54 C
ATOM 10 O3' A B 332 55.640-107.220 -79.091 1.00 63.75 O
ATOM 11 C2' A B 332 56.611-108.160 -77.049 1.00 52.77 C
ATOM 12 O2' A B 332 56.474-106.866 -76.494 1.00 53.78 O
ATOM 13 C1' A B 332 56.039-109.147 -76.053 1.00 51.69 C
ATOM 14 N9 A B 332 56.732-110.446 -76.066 1.00 55.92 N
ATOM 15 C8 A B 332 56.411-111.594 -76.738 1.00 58.51 C
ATOM 16 N7 A B 332 57.193-112.620 -76.480 1.00 51.78 N
ATOM 17 C5 A B 332 58.083-112.116 -75.551 1.00 53.02 C
ATOM 18 C6 A B 332 59.162-112.688 -74.869 1.00 48.82 C
ATOM 19 N6 A B 332 59.573-113.945 -75.009 1.00 56.36 N
ATOM 20 N1 A B 332 59.829-111.915 -74.013 1.00 49.17 N
ATOM 21 C2 A B 332 59.439-110.658 -73.843 1.00 53.39 C
ATOM 22 N3 A B 332 58.448-110.001 -74.417 1.00 55.92 N
ATOM 23 C4 A B 332 57.799-110.793 -75.278 1.00 58.14 C
ATOM 24 P G B 333 55.675-107.445 -80.681 1.00 56.15 P
ATOM 25 OP1 G B 333 54.261-107.634 -81.127 1.00 95.12 O
ATOM 26 OP2 G B 333 56.650-108.524 -80.952 1.00 78.50 O
ATOM 27 O5' G B 333 56.229-106.053 -81.208 1.00 58.93 O
TER
Atoms:
OP1: (55.602,-102.335,-69.644)
OP2: (56.757,-101.033,-71.484)
C3': (60.159,-104.893,-69.993)
C1': (59.773,-107.035,-69.079)
C5': (57.648,-104.547,-70.266)
O6: (57.942,-112.464,-70.903)
O4': (58.579,-106.314,-68.909)
C8: (60.227,-109.473,-68.904)
C2: (56.732,-109.195,-71.523)
C6: (57.879,-111.233,-70.841)
C5: (58.722,-110.354,-70.118)
C4: (58.503,-109.002,-70.170)
P: (56.420,-102.328,-70.875)
C4': (58.775,-104.945,-69.358)
C2': (60.493,-106.354,-70.223)
O2': (61.859,-106.637,-70.194)
N1: (56.886,-110.556,-71.535)
N2: (55.706,-108.716,-72.249)
N3: (57.527,-108.367,-70.853)
N7: (59.809,-110.633,-69.316)
N9: (59.467,-108.440,-69.353)
O5': (57.735,-103.176,-70.644)
O3': (61.084,-104.342,-69.073)
OP2: (56.757,-101.033,-71.484)
C3': (60.159,-104.893,-69.993)
C1': (59.773,-107.035,-69.079)
C5': (57.648,-104.547,-70.266)
O6: (57.942,-112.464,-70.903)
O4': (58.579,-106.314,-68.909)
C8: (60.227,-109.473,-68.904)
C2: (56.732,-109.195,-71.523)
C6: (57.879,-111.233,-70.841)
C5: (58.722,-110.354,-70.118)
C4: (58.503,-109.002,-70.170)
P: (56.420,-102.328,-70.875)
C4': (58.775,-104.945,-69.358)
C2': (60.493,-106.354,-70.223)
O2': (61.859,-106.637,-70.194)
N1: (56.886,-110.556,-71.535)
N2: (55.706,-108.716,-72.249)
N3: (57.527,-108.367,-70.853)
N7: (59.809,-110.633,-69.316)
N9: (59.467,-108.440,-69.353)
O5': (57.735,-103.176,-70.644)
O3': (61.084,-104.342,-69.073)
OP1: (52.114,-110.815,-80.731)
OP2: (53.629,-112.697,-79.931)
C3': (55.656,-108.328,-78.214)
C1': (56.039,-109.147,-76.053)
C5': (53.280,-109.249,-78.336)
O4': (54.680,-109.349,-76.376)
C8: (56.411,-111.594,-76.738)
O2': (56.474,-106.866,-76.494)
C6: (59.162,-112.688,-74.869)
C5: (58.083,-112.116,-75.551)
C4: (57.799,-110.793,-75.278)
P: (52.870,-111.469,-79.636)
C4': (54.329,-108.545,-77.522)
C2': (56.611,-108.160,-77.049)
C2: (59.439,-110.658,-73.843)
N1: (59.829,-111.915,-74.013)
N3: (58.448,-110.001,-74.417)
N6: (59.573,-113.945,-75.009)
N7: (57.193,-112.620,-76.480)
N9: (56.732,-110.446,-76.066)
O5': (53.810,-110.414,-78.937)
O3': (55.640,-107.220,-79.091)
OP2: (53.629,-112.697,-79.931)
C3': (55.656,-108.328,-78.214)
C1': (56.039,-109.147,-76.053)
C5': (53.280,-109.249,-78.336)
O4': (54.680,-109.349,-76.376)
C8: (56.411,-111.594,-76.738)
O2': (56.474,-106.866,-76.494)
C6: (59.162,-112.688,-74.869)
C5: (58.083,-112.116,-75.551)
C4: (57.799,-110.793,-75.278)
P: (52.870,-111.469,-79.636)
C4': (54.329,-108.545,-77.522)
C2': (56.611,-108.160,-77.049)
C2: (59.439,-110.658,-73.843)
N1: (59.829,-111.915,-74.013)
N3: (58.448,-110.001,-74.417)
N6: (59.573,-113.945,-75.009)
N7: (57.193,-112.620,-76.480)
N9: (56.732,-110.446,-76.066)
O5': (53.810,-110.414,-78.937)
O3': (55.640,-107.220,-79.091)
Image (generated by PyMOL):