Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:B12:B9
Extra
PDB:
ATOM 1 O3' C A 11 53.148 37.180 111.959 1.00 58.92 O
ATOM 2 P A A 12 54.622 36.724 112.393 1.00 59.50 P
ATOM 3 OP1 A A 12 54.500 35.777 113.521 1.00 61.01 O
ATOM 4 OP2 A A 12 55.457 37.931 112.558 1.00 60.03 O
ATOM 5 O5' A A 12 55.162 35.944 111.118 1.00 57.21 O
ATOM 6 C5' A A 12 55.058 34.516 111.019 1.00 55.65 C
ATOM 7 C4' A A 12 55.763 34.037 109.778 1.00 54.92 C
ATOM 8 O4' A A 12 54.993 34.407 108.601 1.00 54.63 O
ATOM 9 C3' A A 12 57.157 34.619 109.563 1.00 54.80 C
ATOM 10 O3' A A 12 57.961 33.646 108.909 1.00 55.36 O
ATOM 11 C2' A A 12 56.885 35.763 108.594 1.00 53.78 C
ATOM 12 O2' A A 12 57.979 36.120 107.785 1.00 53.33 O
ATOM 13 C1' A A 12 55.817 35.136 107.716 1.00 53.75 C
ATOM 14 N9 A A 12 55.017 36.124 106.997 1.00 53.83 N
ATOM 15 C8 A A 12 53.902 36.818 107.405 1.00 53.29 C
ATOM 16 N7 A A 12 53.433 37.641 106.499 1.00 52.41 N
ATOM 17 C5 A A 12 54.298 37.479 105.425 1.00 51.76 C
ATOM 18 C6 A A 12 54.351 38.074 104.155 1.00 50.99 C
ATOM 19 N6 A A 12 53.476 38.981 103.729 1.00 50.43 N
ATOM 20 N1 A A 12 55.348 37.698 103.324 1.00 50.48 N
ATOM 21 C2 A A 12 56.226 36.778 103.753 1.00 52.38 C
ATOM 22 N3 A A 12 56.276 36.145 104.921 1.00 53.32 N
ATOM 23 C4 A A 12 55.274 36.547 105.719 1.00 52.83 C
ATOM 24 P G A 13 59.398 33.256 109.515 1.00 56.60 P
ATOM 25 OP1 G A 13 59.821 32.022 108.805 1.00 57.83 O
ATOM 26 OP2 G A 13 59.288 33.259 110.998 1.00 54.82 O
ATOM 27 O5' G A 13 60.383 34.440 109.091 1.00 56.26 O
TER
ATOM 1 O3' C B 8 51.853 42.163 99.066 1.00 48.39 O
ATOM 2 P C B 9 53.178 43.094 99.005 1.00 48.71 P
ATOM 3 OP1 C B 9 52.730 44.376 99.559 1.00 48.84 O
ATOM 4 OP2 C B 9 53.785 43.057 97.644 1.00 49.57 O
ATOM 5 O5' C B 9 54.223 42.434 100.011 1.00 48.64 O
ATOM 6 C5' C B 9 53.944 42.362 101.422 1.00 50.44 C
ATOM 7 C4' C B 9 54.939 41.444 102.119 1.00 53.01 C
ATOM 8 O4' C B 9 55.076 40.198 101.366 1.00 53.34 O
ATOM 9 C3' C B 9 56.366 41.951 102.354 1.00 52.52 C
ATOM 10 O3' C B 9 56.820 41.413 103.567 1.00 52.52 O
ATOM 11 C2' C B 9 57.138 41.327 101.198 1.00 52.47 C
ATOM 12 O2' C B 9 58.536 41.122 101.422 1.00 53.07 O
ATOM 13 C1' C B 9 56.447 39.969 101.101 1.00 52.40 C
ATOM 14 N1 C B 9 56.571 39.329 99.789 1.00 51.61 N
ATOM 15 C2 C B 9 57.253 38.107 99.697 1.00 52.74 C
ATOM 16 O2 C B 9 57.739 37.607 100.726 1.00 54.76 O
ATOM 17 N3 C B 9 57.360 37.499 98.495 1.00 51.98 N
ATOM 18 C4 C B 9 56.816 38.064 97.415 1.00 50.75 C
ATOM 19 N4 C B 9 56.940 37.432 96.249 1.00 50.42 N
ATOM 20 C5 C B 9 56.118 39.309 97.482 1.00 50.70 C
ATOM 21 C6 C B 9 56.025 39.902 98.676 1.00 50.94 C
ATOM 22 P A B 10 57.146 42.371 104.820 1.00 55.14 P
ATOM 23 OP1 A B 10 55.967 43.239 105.055 1.00 54.87 O
ATOM 24 OP2 A B 10 58.490 42.959 104.610 1.00 54.02 O
ATOM 25 O5' A B 10 57.284 41.376 106.057 1.00 53.80 O
TER
ATOM 2 P A A 12 54.622 36.724 112.393 1.00 59.50 P
ATOM 3 OP1 A A 12 54.500 35.777 113.521 1.00 61.01 O
ATOM 4 OP2 A A 12 55.457 37.931 112.558 1.00 60.03 O
ATOM 5 O5' A A 12 55.162 35.944 111.118 1.00 57.21 O
ATOM 6 C5' A A 12 55.058 34.516 111.019 1.00 55.65 C
ATOM 7 C4' A A 12 55.763 34.037 109.778 1.00 54.92 C
ATOM 8 O4' A A 12 54.993 34.407 108.601 1.00 54.63 O
ATOM 9 C3' A A 12 57.157 34.619 109.563 1.00 54.80 C
ATOM 10 O3' A A 12 57.961 33.646 108.909 1.00 55.36 O
ATOM 11 C2' A A 12 56.885 35.763 108.594 1.00 53.78 C
ATOM 12 O2' A A 12 57.979 36.120 107.785 1.00 53.33 O
ATOM 13 C1' A A 12 55.817 35.136 107.716 1.00 53.75 C
ATOM 14 N9 A A 12 55.017 36.124 106.997 1.00 53.83 N
ATOM 15 C8 A A 12 53.902 36.818 107.405 1.00 53.29 C
ATOM 16 N7 A A 12 53.433 37.641 106.499 1.00 52.41 N
ATOM 17 C5 A A 12 54.298 37.479 105.425 1.00 51.76 C
ATOM 18 C6 A A 12 54.351 38.074 104.155 1.00 50.99 C
ATOM 19 N6 A A 12 53.476 38.981 103.729 1.00 50.43 N
ATOM 20 N1 A A 12 55.348 37.698 103.324 1.00 50.48 N
ATOM 21 C2 A A 12 56.226 36.778 103.753 1.00 52.38 C
ATOM 22 N3 A A 12 56.276 36.145 104.921 1.00 53.32 N
ATOM 23 C4 A A 12 55.274 36.547 105.719 1.00 52.83 C
ATOM 24 P G A 13 59.398 33.256 109.515 1.00 56.60 P
ATOM 25 OP1 G A 13 59.821 32.022 108.805 1.00 57.83 O
ATOM 26 OP2 G A 13 59.288 33.259 110.998 1.00 54.82 O
ATOM 27 O5' G A 13 60.383 34.440 109.091 1.00 56.26 O
TER
ATOM 1 O3' C B 8 51.853 42.163 99.066 1.00 48.39 O
ATOM 2 P C B 9 53.178 43.094 99.005 1.00 48.71 P
ATOM 3 OP1 C B 9 52.730 44.376 99.559 1.00 48.84 O
ATOM 4 OP2 C B 9 53.785 43.057 97.644 1.00 49.57 O
ATOM 5 O5' C B 9 54.223 42.434 100.011 1.00 48.64 O
ATOM 6 C5' C B 9 53.944 42.362 101.422 1.00 50.44 C
ATOM 7 C4' C B 9 54.939 41.444 102.119 1.00 53.01 C
ATOM 8 O4' C B 9 55.076 40.198 101.366 1.00 53.34 O
ATOM 9 C3' C B 9 56.366 41.951 102.354 1.00 52.52 C
ATOM 10 O3' C B 9 56.820 41.413 103.567 1.00 52.52 O
ATOM 11 C2' C B 9 57.138 41.327 101.198 1.00 52.47 C
ATOM 12 O2' C B 9 58.536 41.122 101.422 1.00 53.07 O
ATOM 13 C1' C B 9 56.447 39.969 101.101 1.00 52.40 C
ATOM 14 N1 C B 9 56.571 39.329 99.789 1.00 51.61 N
ATOM 15 C2 C B 9 57.253 38.107 99.697 1.00 52.74 C
ATOM 16 O2 C B 9 57.739 37.607 100.726 1.00 54.76 O
ATOM 17 N3 C B 9 57.360 37.499 98.495 1.00 51.98 N
ATOM 18 C4 C B 9 56.816 38.064 97.415 1.00 50.75 C
ATOM 19 N4 C B 9 56.940 37.432 96.249 1.00 50.42 N
ATOM 20 C5 C B 9 56.118 39.309 97.482 1.00 50.70 C
ATOM 21 C6 C B 9 56.025 39.902 98.676 1.00 50.94 C
ATOM 22 P A B 10 57.146 42.371 104.820 1.00 55.14 P
ATOM 23 OP1 A B 10 55.967 43.239 105.055 1.00 54.87 O
ATOM 24 OP2 A B 10 58.490 42.959 104.610 1.00 54.02 O
ATOM 25 O5' A B 10 57.284 41.376 106.057 1.00 53.80 O
TER
Atoms:
OP1: (54.500,35.777,113.521)
OP2: (55.457,37.931,112.558)
C3': (57.157,34.619,109.563)
C1': (55.817,35.136,107.716)
C5': (55.058,34.516,111.019)
O4': (54.993,34.407,108.601)
C8: (53.902,36.818,107.405)
O2': (57.979,36.120,107.785)
C6: (54.351,38.074,104.155)
C5: (54.298,37.479,105.425)
C4: (55.274,36.547,105.719)
P: (54.622,36.724,112.393)
C4': (55.763,34.037,109.778)
C2': (56.885,35.763,108.594)
C2: (56.226,36.778,103.753)
N1: (55.348,37.698,103.324)
N3: (56.276,36.145,104.921)
N6: (53.476,38.981,103.729)
N7: (53.433,37.641,106.499)
N9: (55.017,36.124,106.997)
O5': (55.162,35.944,111.118)
O3': (57.961,33.646,108.909)
OP2: (55.457,37.931,112.558)
C3': (57.157,34.619,109.563)
C1': (55.817,35.136,107.716)
C5': (55.058,34.516,111.019)
O4': (54.993,34.407,108.601)
C8: (53.902,36.818,107.405)
O2': (57.979,36.120,107.785)
C6: (54.351,38.074,104.155)
C5: (54.298,37.479,105.425)
C4: (55.274,36.547,105.719)
P: (54.622,36.724,112.393)
C4': (55.763,34.037,109.778)
C2': (56.885,35.763,108.594)
C2: (56.226,36.778,103.753)
N1: (55.348,37.698,103.324)
N3: (56.276,36.145,104.921)
N6: (53.476,38.981,103.729)
N7: (53.433,37.641,106.499)
N9: (55.017,36.124,106.997)
O5': (55.162,35.944,111.118)
O3': (57.961,33.646,108.909)
C2: (57.253,38.107,99.697)
OP1: (52.730,44.376,99.559)
OP2: (53.785,43.057,97.644)
C4: (56.816,38.064,97.415)
O5': (54.223,42.434,100.011)
C3': (56.366,41.951,102.354)
C1': (56.447,39.969,101.101)
O4': (55.076,40.198,101.366)
C5': (53.944,42.362,101.422)
P: (53.178,43.094,99.005)
O2: (57.739,37.607,100.726)
C4': (54.939,41.444,102.119)
C2': (57.138,41.327,101.198)
O2': (58.536,41.122,101.422)
N1: (56.571,39.329,99.789)
N3: (57.360,37.499,98.495)
N4: (56.940,37.432,96.249)
C6: (56.025,39.902,98.676)
C5: (56.118,39.309,97.482)
O3': (56.820,41.413,103.567)
OP1: (52.730,44.376,99.559)
OP2: (53.785,43.057,97.644)
C4: (56.816,38.064,97.415)
O5': (54.223,42.434,100.011)
C3': (56.366,41.951,102.354)
C1': (56.447,39.969,101.101)
O4': (55.076,40.198,101.366)
C5': (53.944,42.362,101.422)
P: (53.178,43.094,99.005)
O2: (57.739,37.607,100.726)
C4': (54.939,41.444,102.119)
C2': (57.138,41.327,101.198)
O2': (58.536,41.122,101.422)
N1: (56.571,39.329,99.789)
N3: (57.360,37.499,98.495)
N4: (56.940,37.432,96.249)
C6: (56.025,39.902,98.676)
C5: (56.118,39.309,97.482)
O3': (56.820,41.413,103.567)
Image (generated by PyMOL):