Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:046:060
Extra
PDB:
ATOM 1 O3' U A 45 54.870 164.897 36.184 1.00 50.10 O
ATOM 2 P G A 46 53.918 165.819 37.090 1.00 51.91 P
ATOM 3 OP1 G A 46 53.690 167.081 36.348 1.00 53.88 O
ATOM 4 OP2 G A 46 54.452 165.865 38.468 1.00 52.42 O
ATOM 5 O5' G A 46 52.538 165.034 37.114 1.00 52.78 O
ATOM 6 C5' G A 46 51.857 164.741 35.892 1.00 53.01 C
ATOM 7 C4' G A 46 50.375 164.709 36.121 1.00 53.86 C
ATOM 8 O4' G A 46 50.043 163.572 36.967 1.00 56.21 O
ATOM 9 C3' G A 46 49.786 165.933 36.815 1.00 55.31 C
ATOM 10 O3' G A 46 48.495 166.156 36.263 1.00 56.93 O
ATOM 11 C2' G A 46 49.646 165.462 38.260 1.00 54.16 C
ATOM 12 O2' G A 46 48.646 166.152 38.978 1.00 52.32 O
ATOM 13 C1' G A 46 49.231 164.012 38.036 1.00 55.77 C
ATOM 14 N9 G A 46 49.361 163.074 39.152 1.00 56.68 N
ATOM 15 C8 G A 46 50.108 163.217 40.302 1.00 55.66 C
ATOM 16 N7 G A 46 50.009 162.193 41.108 1.00 54.69 N
ATOM 17 C5 G A 46 49.146 161.324 40.453 1.00 56.19 C
ATOM 18 C6 G A 46 48.667 160.043 40.833 1.00 55.05 C
ATOM 19 O6 G A 46 48.914 159.401 41.854 1.00 53.59 O
ATOM 20 N1 G A 46 47.820 159.507 39.867 1.00 57.25 N
ATOM 21 C2 G A 46 47.479 160.119 38.687 1.00 56.24 C
ATOM 22 N2 G A 46 46.664 159.428 37.878 1.00 55.03 N
ATOM 23 N3 G A 46 47.911 161.314 38.325 1.00 56.51 N
ATOM 24 C4 G A 46 48.737 161.853 39.246 1.00 56.36 C
ATOM 25 P C A 47 48.168 167.551 35.544 1.00 58.01 P
ATOM 26 OP1 C A 47 46.765 167.476 35.064 1.00 61.06 O
ATOM 27 OP2 C A 47 49.263 167.822 34.572 1.00 57.41 O
ATOM 28 O5' C A 47 48.223 168.596 36.743 1.00 57.53 O
TER
ATOM 1 O3' A B 59 53.101 160.571 31.460 1.00 49.99 O
ATOM 2 P A B 60 52.068 160.927 32.656 1.00 49.09 P
ATOM 3 OP1 A B 60 51.329 162.180 32.318 1.00 49.82 O
ATOM 4 OP2 A B 60 52.753 160.827 33.971 1.00 49.80 O
ATOM 5 O5' A B 60 51.028 159.725 32.596 1.00 47.87 O
ATOM 6 C5' A B 60 49.620 159.966 32.719 1.00 50.87 C
ATOM 7 C4' A B 60 48.856 158.669 32.616 1.00 52.63 C
ATOM 8 O4' A B 60 49.328 157.745 33.634 1.00 51.73 O
ATOM 9 C3' A B 60 47.356 158.794 32.836 1.00 53.27 C
ATOM 10 O3' A B 60 46.715 157.771 32.094 1.00 57.53 O
ATOM 11 C2' A B 60 47.221 158.541 34.332 1.00 52.68 C
ATOM 12 O2' A B 60 45.941 158.061 34.683 1.00 52.17 O
ATOM 13 C1' A B 60 48.292 157.475 34.555 1.00 51.86 C
ATOM 14 N9 A B 60 48.888 157.493 35.889 1.00 53.30 N
ATOM 15 C8 A B 60 48.887 156.485 36.817 1.00 54.97 C
ATOM 16 N7 A B 60 49.556 156.770 37.908 1.00 56.47 N
ATOM 17 C5 A B 60 50.021 158.059 37.687 1.00 55.86 C
ATOM 18 C6 A B 60 50.807 158.929 38.465 1.00 55.62 C
ATOM 19 N6 A B 60 51.306 158.607 39.662 1.00 57.44 N
ATOM 20 N1 A B 60 51.071 160.152 37.963 1.00 54.10 N
ATOM 21 C2 A B 60 50.593 160.464 36.755 1.00 53.31 C
ATOM 22 N3 A B 60 49.860 159.731 35.924 1.00 54.42 N
ATOM 23 C4 A B 60 49.602 158.524 36.456 1.00 54.49 C
ATOM 24 P G B 61 45.788 158.160 30.847 1.00 62.46 P
ATOM 25 OP1 G B 61 44.607 158.910 31.358 1.00 61.99 O
ATOM 26 OP2 G B 61 45.588 156.925 30.037 1.00 64.20 O
ATOM 27 O5' G B 61 46.675 159.196 30.023 1.00 61.51 O
TER
ATOM 2 P G A 46 53.918 165.819 37.090 1.00 51.91 P
ATOM 3 OP1 G A 46 53.690 167.081 36.348 1.00 53.88 O
ATOM 4 OP2 G A 46 54.452 165.865 38.468 1.00 52.42 O
ATOM 5 O5' G A 46 52.538 165.034 37.114 1.00 52.78 O
ATOM 6 C5' G A 46 51.857 164.741 35.892 1.00 53.01 C
ATOM 7 C4' G A 46 50.375 164.709 36.121 1.00 53.86 C
ATOM 8 O4' G A 46 50.043 163.572 36.967 1.00 56.21 O
ATOM 9 C3' G A 46 49.786 165.933 36.815 1.00 55.31 C
ATOM 10 O3' G A 46 48.495 166.156 36.263 1.00 56.93 O
ATOM 11 C2' G A 46 49.646 165.462 38.260 1.00 54.16 C
ATOM 12 O2' G A 46 48.646 166.152 38.978 1.00 52.32 O
ATOM 13 C1' G A 46 49.231 164.012 38.036 1.00 55.77 C
ATOM 14 N9 G A 46 49.361 163.074 39.152 1.00 56.68 N
ATOM 15 C8 G A 46 50.108 163.217 40.302 1.00 55.66 C
ATOM 16 N7 G A 46 50.009 162.193 41.108 1.00 54.69 N
ATOM 17 C5 G A 46 49.146 161.324 40.453 1.00 56.19 C
ATOM 18 C6 G A 46 48.667 160.043 40.833 1.00 55.05 C
ATOM 19 O6 G A 46 48.914 159.401 41.854 1.00 53.59 O
ATOM 20 N1 G A 46 47.820 159.507 39.867 1.00 57.25 N
ATOM 21 C2 G A 46 47.479 160.119 38.687 1.00 56.24 C
ATOM 22 N2 G A 46 46.664 159.428 37.878 1.00 55.03 N
ATOM 23 N3 G A 46 47.911 161.314 38.325 1.00 56.51 N
ATOM 24 C4 G A 46 48.737 161.853 39.246 1.00 56.36 C
ATOM 25 P C A 47 48.168 167.551 35.544 1.00 58.01 P
ATOM 26 OP1 C A 47 46.765 167.476 35.064 1.00 61.06 O
ATOM 27 OP2 C A 47 49.263 167.822 34.572 1.00 57.41 O
ATOM 28 O5' C A 47 48.223 168.596 36.743 1.00 57.53 O
TER
ATOM 1 O3' A B 59 53.101 160.571 31.460 1.00 49.99 O
ATOM 2 P A B 60 52.068 160.927 32.656 1.00 49.09 P
ATOM 3 OP1 A B 60 51.329 162.180 32.318 1.00 49.82 O
ATOM 4 OP2 A B 60 52.753 160.827 33.971 1.00 49.80 O
ATOM 5 O5' A B 60 51.028 159.725 32.596 1.00 47.87 O
ATOM 6 C5' A B 60 49.620 159.966 32.719 1.00 50.87 C
ATOM 7 C4' A B 60 48.856 158.669 32.616 1.00 52.63 C
ATOM 8 O4' A B 60 49.328 157.745 33.634 1.00 51.73 O
ATOM 9 C3' A B 60 47.356 158.794 32.836 1.00 53.27 C
ATOM 10 O3' A B 60 46.715 157.771 32.094 1.00 57.53 O
ATOM 11 C2' A B 60 47.221 158.541 34.332 1.00 52.68 C
ATOM 12 O2' A B 60 45.941 158.061 34.683 1.00 52.17 O
ATOM 13 C1' A B 60 48.292 157.475 34.555 1.00 51.86 C
ATOM 14 N9 A B 60 48.888 157.493 35.889 1.00 53.30 N
ATOM 15 C8 A B 60 48.887 156.485 36.817 1.00 54.97 C
ATOM 16 N7 A B 60 49.556 156.770 37.908 1.00 56.47 N
ATOM 17 C5 A B 60 50.021 158.059 37.687 1.00 55.86 C
ATOM 18 C6 A B 60 50.807 158.929 38.465 1.00 55.62 C
ATOM 19 N6 A B 60 51.306 158.607 39.662 1.00 57.44 N
ATOM 20 N1 A B 60 51.071 160.152 37.963 1.00 54.10 N
ATOM 21 C2 A B 60 50.593 160.464 36.755 1.00 53.31 C
ATOM 22 N3 A B 60 49.860 159.731 35.924 1.00 54.42 N
ATOM 23 C4 A B 60 49.602 158.524 36.456 1.00 54.49 C
ATOM 24 P G B 61 45.788 158.160 30.847 1.00 62.46 P
ATOM 25 OP1 G B 61 44.607 158.910 31.358 1.00 61.99 O
ATOM 26 OP2 G B 61 45.588 156.925 30.037 1.00 64.20 O
ATOM 27 O5' G B 61 46.675 159.196 30.023 1.00 61.51 O
TER
Atoms:
OP1: (53.690,167.081,36.348)
OP2: (54.452,165.865,38.468)
C3': (49.786,165.933,36.815)
C1': (49.231,164.012,38.036)
C5': (51.857,164.741,35.892)
O6: (48.914,159.401,41.854)
O4': (50.043,163.572,36.967)
C8: (50.108,163.217,40.302)
C2: (47.479,160.119,38.687)
C6: (48.667,160.043,40.833)
C5: (49.146,161.324,40.453)
C4: (48.737,161.853,39.246)
P: (53.918,165.819,37.090)
C4': (50.375,164.709,36.121)
C2': (49.646,165.462,38.260)
O2': (48.646,166.152,38.978)
N1: (47.820,159.507,39.867)
N2: (46.664,159.428,37.878)
N3: (47.911,161.314,38.325)
N7: (50.009,162.193,41.108)
N9: (49.361,163.074,39.152)
O5': (52.538,165.034,37.114)
O3': (48.495,166.156,36.263)
OP2: (54.452,165.865,38.468)
C3': (49.786,165.933,36.815)
C1': (49.231,164.012,38.036)
C5': (51.857,164.741,35.892)
O6: (48.914,159.401,41.854)
O4': (50.043,163.572,36.967)
C8: (50.108,163.217,40.302)
C2: (47.479,160.119,38.687)
C6: (48.667,160.043,40.833)
C5: (49.146,161.324,40.453)
C4: (48.737,161.853,39.246)
P: (53.918,165.819,37.090)
C4': (50.375,164.709,36.121)
C2': (49.646,165.462,38.260)
O2': (48.646,166.152,38.978)
N1: (47.820,159.507,39.867)
N2: (46.664,159.428,37.878)
N3: (47.911,161.314,38.325)
N7: (50.009,162.193,41.108)
N9: (49.361,163.074,39.152)
O5': (52.538,165.034,37.114)
O3': (48.495,166.156,36.263)
OP1: (51.329,162.180,32.318)
OP2: (52.753,160.827,33.971)
C3': (47.356,158.794,32.836)
C1': (48.292,157.475,34.555)
C5': (49.620,159.966,32.719)
O4': (49.328,157.745,33.634)
C8: (48.887,156.485,36.817)
O2': (45.941,158.061,34.683)
C6: (50.807,158.929,38.465)
C5: (50.021,158.059,37.687)
C4: (49.602,158.524,36.456)
P: (52.068,160.927,32.656)
C4': (48.856,158.669,32.616)
C2': (47.221,158.541,34.332)
C2: (50.593,160.464,36.755)
N1: (51.071,160.152,37.963)
N3: (49.860,159.731,35.924)
N6: (51.306,158.607,39.662)
N7: (49.556,156.770,37.908)
N9: (48.888,157.493,35.889)
O5': (51.028,159.725,32.596)
O3': (46.715,157.771,32.094)
OP2: (52.753,160.827,33.971)
C3': (47.356,158.794,32.836)
C1': (48.292,157.475,34.555)
C5': (49.620,159.966,32.719)
O4': (49.328,157.745,33.634)
C8: (48.887,156.485,36.817)
O2': (45.941,158.061,34.683)
C6: (50.807,158.929,38.465)
C5: (50.021,158.059,37.687)
C4: (49.602,158.524,36.456)
P: (52.068,160.927,32.656)
C4': (48.856,158.669,32.616)
C2': (47.221,158.541,34.332)
C2: (50.593,160.464,36.755)
N1: (51.071,160.152,37.963)
N3: (49.860,159.731,35.924)
N6: (51.306,158.607,39.662)
N7: (49.556,156.770,37.908)
N9: (48.888,157.493,35.889)
O5': (51.028,159.725,32.596)
O3': (46.715,157.771,32.094)
Image (generated by PyMOL):