ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2AZ2:C16:D2

Extra

PDB:
ATOM 1 P G A 16 -38.437 -20.973 -14.807 1.00 33.16 P
ATOM 2 OP1 G A 16 -38.248 -22.426 -14.523 1.00 32.73 O
ATOM 3 OP2 G A 16 -39.264 -20.543 -15.956 1.00 29.58 O
ATOM 4 O5' G A 16 -39.080 -20.250 -13.532 1.00 34.00 O
ATOM 5 C5' G A 16 -38.475 -20.341 -12.243 1.00 29.05 C
ATOM 6 C4' G A 16 -39.149 -19.402 -11.258 1.00 30.31 C
ATOM 7 O4' G A 16 -38.836 -18.014 -11.582 1.00 29.80 O
ATOM 8 C3' G A 16 -40.672 -19.426 -11.257 1.00 29.56 C
ATOM 9 O3' G A 16 -41.208 -20.521 -10.526 1.00 28.62 O
ATOM 10 C2' G A 16 -41.022 -18.073 -10.646 1.00 29.66 C
ATOM 11 O2' G A 16 -40.940 -18.007 -9.236 1.00 30.09 O
ATOM 12 C1' G A 16 -39.940 -17.183 -11.241 1.00 29.37 C
ATOM 13 N9 G A 16 -40.435 -16.485 -12.422 1.00 31.55 N
ATOM 14 C8 G A 16 -40.332 -16.871 -13.734 1.00 33.08 C
ATOM 15 N7 G A 16 -40.909 -16.039 -14.558 1.00 33.77 N
ATOM 16 C5 G A 16 -41.416 -15.041 -13.742 1.00 31.77 C
ATOM 17 C6 G A 16 -42.131 -13.868 -14.072 1.00 32.87 C
ATOM 18 O6 G A 16 -42.477 -13.465 -15.186 1.00 33.65 O
ATOM 19 N1 G A 16 -42.445 -13.127 -12.942 1.00 34.51 N
ATOM 20 C2 G A 16 -42.111 -13.471 -11.658 1.00 34.29 C
ATOM 21 N2 G A 16 -42.502 -12.623 -10.703 1.00 35.67 N
ATOM 22 N3 G A 16 -41.443 -14.564 -11.336 1.00 32.43 N
ATOM 23 C4 G A 16 -41.130 -15.297 -12.422 1.00 31.57 C
ATOM 24 P C A 17 -42.685 -21.058 -10.864 1.00 29.82 P
ATOM 25 OP1 C A 17 -42.801 -22.311 -10.078 1.00 31.45 O
ATOM 26 OP2 C A 17 -42.917 -21.093 -12.324 1.00 31.44 O
ATOM 27 O5' C A 17 -43.666 -19.955 -10.264 1.00 28.82 O
TER

ATOM 1 O3' C B 1 -44.296 -4.990 -10.289 1.00 23.93 O
ATOM 2 P A B 2 -42.736 -4.598 -10.332 1.00 26.39 P
ATOM 3 OP1 A B 2 -42.555 -3.504 -9.350 1.00 26.31 O
ATOM 4 OP2 A B 2 -42.312 -4.392 -11.746 1.00 29.25 O
ATOM 5 O5' A B 2 -41.971 -5.878 -9.768 1.00 26.71 O
ATOM 6 C5' A B 2 -42.140 -6.303 -8.418 1.00 23.69 C
ATOM 7 C4' A B 2 -41.235 -7.477 -8.122 1.00 25.24 C
ATOM 8 O4' A B 2 -41.681 -8.660 -8.851 1.00 25.95 O
ATOM 9 C3' A B 2 -39.792 -7.296 -8.545 1.00 24.99 C
ATOM 10 O3' A B 2 -39.095 -6.545 -7.565 1.00 25.52 O
ATOM 11 C2' A B 2 -39.318 -8.743 -8.676 1.00 27.30 C
ATOM 12 O2' A B 2 -39.055 -9.373 -7.436 1.00 26.03 O
ATOM 13 C1' A B 2 -40.553 -9.415 -9.275 1.00 25.48 C
ATOM 14 N9 A B 2 -40.547 -9.467 -10.742 1.00 24.71 N
ATOM 15 C8 A B 2 -41.123 -8.568 -11.604 1.00 24.42 C
ATOM 16 N7 A B 2 -41.008 -8.897 -12.868 1.00 23.18 N
ATOM 17 C5 A B 2 -40.297 -10.083 -12.841 1.00 23.97 C
ATOM 18 C6 A B 2 -39.852 -10.943 -13.868 1.00 25.33 C
ATOM 19 N6 A B 2 -40.073 -10.718 -15.168 1.00 25.87 N
ATOM 20 N1 A B 2 -39.165 -12.053 -13.509 1.00 25.24 N
ATOM 21 C2 A B 2 -38.945 -12.271 -12.206 1.00 25.15 C
ATOM 22 N3 A B 2 -39.312 -11.534 -11.149 1.00 26.13 N
ATOM 23 C4 A B 2 -39.994 -10.443 -11.540 1.00 23.49 C
TER

Atoms:
OP1: (-38.248,-22.426,-14.523)
OP2: (-39.264,-20.543,-15.956)
C3': (-40.672,-19.426,-11.257)
C1': (-39.940,-17.183,-11.241)
C5': (-38.475,-20.341,-12.243)
O6: (-42.477,-13.465,-15.186)
O4': (-38.836,-18.014,-11.582)
C8: (-40.332,-16.871,-13.734)
C2: (-42.111,-13.471,-11.658)
C6: (-42.131,-13.868,-14.072)
C5: (-41.416,-15.041,-13.742)
C4: (-41.130,-15.297,-12.422)
P: (-38.437,-20.973,-14.807)
C4': (-39.149,-19.402,-11.258)
C2': (-41.022,-18.073,-10.646)
O2': (-40.940,-18.007,-9.236)
N1: (-42.445,-13.127,-12.942)
N2: (-42.502,-12.623,-10.703)
N3: (-41.443,-14.564,-11.336)
N7: (-40.909,-16.039,-14.558)
N9: (-40.435,-16.485,-12.422)
O5': (-39.080,-20.250,-13.532)
O3': (-41.208,-20.521,-10.526)
OP1: (-42.555,-3.504,-9.350)
OP2: (-42.312,-4.392,-11.746)
C3': (-39.792,-7.296,-8.545)
C1': (-40.553,-9.415,-9.275)
C5': (-42.140,-6.303,-8.418)
O4': (-41.681,-8.660,-8.851)
C8: (-41.123,-8.568,-11.604)
O2': (-39.055,-9.373,-7.436)
C6: (-39.852,-10.943,-13.868)
C5: (-40.297,-10.083,-12.841)
C4: (-39.994,-10.443,-11.540)
P: (-42.736,-4.598,-10.332)
C4': (-41.235,-7.477,-8.122)
C2': (-39.318,-8.743,-8.676)
C2: (-38.945,-12.271,-12.206)
N1: (-39.165,-12.053,-13.509)
N3: (-39.312,-11.534,-11.149)
N6: (-40.073,-10.718,-15.168)
N7: (-41.008,-8.897,-12.868)
N9: (-40.547,-9.467,-10.742)
O5': (-41.971,-5.878,-9.768)
O3': (-39.095,-6.545,-7.565)
Image (generated by PyMOL):
PyMOL image
show in jmol