Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:A161:A187
Extra
PDB:
ATOM 1 O3' U A 160 8.916 -0.691 87.851 1.00 98.56 O
ATOM 2 P G A 161 8.488 -0.132 86.411 1.00103.53 P
ATOM 3 OP1 G A 161 7.014 -0.282 86.279 1.00 96.63 O
ATOM 4 OP2 G A 161 9.377 -0.758 85.405 1.00109.51 O
ATOM 5 O5' G A 161 8.881 1.414 86.462 1.00110.45 O
ATOM 6 C5' G A 161 10.220 1.829 86.752 1.00105.51 C
ATOM 7 C4' G A 161 11.076 1.771 85.504 1.00107.72 C
ATOM 8 O4' G A 161 11.820 0.550 85.323 1.00113.67 O
ATOM 9 C3' G A 161 10.420 2.075 84.166 1.00109.80 C
ATOM 10 O3' G A 161 10.660 3.434 83.845 1.00113.00 O
ATOM 11 C2' G A 161 11.051 1.065 83.194 1.00113.32 C
ATOM 12 O2' G A 161 11.393 1.617 81.938 1.00114.94 O
ATOM 13 C1' G A 161 12.254 0.532 83.978 1.00114.88 C
ATOM 14 N9 G A 161 12.645 -0.836 83.625 1.00113.64 N
ATOM 15 C8 G A 161 11.925 -1.986 83.848 1.00112.03 C
ATOM 16 N7 G A 161 12.531 -3.064 83.430 1.00110.25 N
ATOM 17 C5 G A 161 13.728 -2.604 82.896 1.00115.41 C
ATOM 18 C6 G A 161 14.809 -3.318 82.294 1.00113.53 C
ATOM 19 O6 G A 161 14.929 -4.541 82.108 1.00110.47 O
ATOM 20 N1 G A 161 15.826 -2.456 81.889 1.00114.38 N
ATOM 21 C2 G A 161 15.813 -1.086 82.042 1.00115.33 C
ATOM 22 N2 G A 161 16.893 -0.432 81.589 1.00110.36 N
ATOM 23 N3 G A 161 14.818 -0.412 82.598 1.00118.92 N
ATOM 24 C4 G A 161 13.815 -1.227 83.003 1.00118.32 C
ATOM 25 P U A 162 9.437 4.462 83.852 1.00116.90 P
ATOM 26 OP1 U A 162 8.415 3.894 84.775 1.00115.86 O
ATOM 27 OP2 U A 162 9.092 4.706 82.428 1.00106.95 O
ATOM 28 O5' U A 162 10.021 5.795 84.503 1.00109.38 O
TER
ATOM 1 O3' C B 186 17.991 -6.784 79.457 1.00107.56 O
ATOM 2 P A B 187 17.608 -7.571 80.804 1.00116.78 P
ATOM 3 OP1 A B 187 18.228 -8.920 80.742 1.00107.51 O
ATOM 4 OP2 A B 187 16.135 -7.445 81.014 1.00111.39 O
ATOM 5 O5' A B 187 18.354 -6.733 81.939 1.00110.56 O
ATOM 6 C5' A B 187 17.998 -5.377 82.208 1.00108.72 C
ATOM 7 C4' A B 187 19.201 -4.582 82.681 1.00105.27 C
ATOM 8 O4' A B 187 18.772 -3.216 82.881 1.00110.63 O
ATOM 9 C3' A B 187 19.814 -5.015 84.009 1.00106.60 C
ATOM 10 O3' A B 187 20.886 -5.916 83.758 1.00105.66 O
ATOM 11 C2' A B 187 20.368 -3.717 84.590 1.00107.46 C
ATOM 12 O2' A B 187 21.677 -3.438 84.145 1.00108.15 O
ATOM 13 C1' A B 187 19.408 -2.671 84.019 1.00113.09 C
ATOM 14 N9 A B 187 18.367 -2.201 84.937 1.00119.82 N
ATOM 15 C8 A B 187 17.448 -2.941 85.639 1.00119.40 C
ATOM 16 N7 A B 187 16.624 -2.216 86.358 1.00120.02 N
ATOM 17 C5 A B 187 17.029 -0.911 86.115 1.00122.93 C
ATOM 18 C6 A B 187 16.547 0.331 86.572 1.00128.44 C
ATOM 19 N6 A B 187 15.502 0.467 87.394 1.00132.81 N
ATOM 20 N1 A B 187 17.180 1.444 86.142 1.00128.15 N
ATOM 21 C2 A B 187 18.216 1.310 85.308 1.00123.90 C
ATOM 22 N3 A B 187 18.754 0.204 84.802 1.00123.43 N
ATOM 23 C4 A B 187 18.107 -0.886 85.250 1.00122.90 C
ATOM 24 P A B 188 20.892 -7.375 84.429 1.00105.60 P
ATOM 25 OP1 A B 188 21.408 -8.344 83.423 1.00101.84 O
ATOM 26 OP2 A B 188 19.564 -7.602 85.058 1.00110.98 O
ATOM 27 O5' A B 188 21.969 -7.255 85.590 1.00101.59 O
TER
ATOM 2 P G A 161 8.488 -0.132 86.411 1.00103.53 P
ATOM 3 OP1 G A 161 7.014 -0.282 86.279 1.00 96.63 O
ATOM 4 OP2 G A 161 9.377 -0.758 85.405 1.00109.51 O
ATOM 5 O5' G A 161 8.881 1.414 86.462 1.00110.45 O
ATOM 6 C5' G A 161 10.220 1.829 86.752 1.00105.51 C
ATOM 7 C4' G A 161 11.076 1.771 85.504 1.00107.72 C
ATOM 8 O4' G A 161 11.820 0.550 85.323 1.00113.67 O
ATOM 9 C3' G A 161 10.420 2.075 84.166 1.00109.80 C
ATOM 10 O3' G A 161 10.660 3.434 83.845 1.00113.00 O
ATOM 11 C2' G A 161 11.051 1.065 83.194 1.00113.32 C
ATOM 12 O2' G A 161 11.393 1.617 81.938 1.00114.94 O
ATOM 13 C1' G A 161 12.254 0.532 83.978 1.00114.88 C
ATOM 14 N9 G A 161 12.645 -0.836 83.625 1.00113.64 N
ATOM 15 C8 G A 161 11.925 -1.986 83.848 1.00112.03 C
ATOM 16 N7 G A 161 12.531 -3.064 83.430 1.00110.25 N
ATOM 17 C5 G A 161 13.728 -2.604 82.896 1.00115.41 C
ATOM 18 C6 G A 161 14.809 -3.318 82.294 1.00113.53 C
ATOM 19 O6 G A 161 14.929 -4.541 82.108 1.00110.47 O
ATOM 20 N1 G A 161 15.826 -2.456 81.889 1.00114.38 N
ATOM 21 C2 G A 161 15.813 -1.086 82.042 1.00115.33 C
ATOM 22 N2 G A 161 16.893 -0.432 81.589 1.00110.36 N
ATOM 23 N3 G A 161 14.818 -0.412 82.598 1.00118.92 N
ATOM 24 C4 G A 161 13.815 -1.227 83.003 1.00118.32 C
ATOM 25 P U A 162 9.437 4.462 83.852 1.00116.90 P
ATOM 26 OP1 U A 162 8.415 3.894 84.775 1.00115.86 O
ATOM 27 OP2 U A 162 9.092 4.706 82.428 1.00106.95 O
ATOM 28 O5' U A 162 10.021 5.795 84.503 1.00109.38 O
TER
ATOM 1 O3' C B 186 17.991 -6.784 79.457 1.00107.56 O
ATOM 2 P A B 187 17.608 -7.571 80.804 1.00116.78 P
ATOM 3 OP1 A B 187 18.228 -8.920 80.742 1.00107.51 O
ATOM 4 OP2 A B 187 16.135 -7.445 81.014 1.00111.39 O
ATOM 5 O5' A B 187 18.354 -6.733 81.939 1.00110.56 O
ATOM 6 C5' A B 187 17.998 -5.377 82.208 1.00108.72 C
ATOM 7 C4' A B 187 19.201 -4.582 82.681 1.00105.27 C
ATOM 8 O4' A B 187 18.772 -3.216 82.881 1.00110.63 O
ATOM 9 C3' A B 187 19.814 -5.015 84.009 1.00106.60 C
ATOM 10 O3' A B 187 20.886 -5.916 83.758 1.00105.66 O
ATOM 11 C2' A B 187 20.368 -3.717 84.590 1.00107.46 C
ATOM 12 O2' A B 187 21.677 -3.438 84.145 1.00108.15 O
ATOM 13 C1' A B 187 19.408 -2.671 84.019 1.00113.09 C
ATOM 14 N9 A B 187 18.367 -2.201 84.937 1.00119.82 N
ATOM 15 C8 A B 187 17.448 -2.941 85.639 1.00119.40 C
ATOM 16 N7 A B 187 16.624 -2.216 86.358 1.00120.02 N
ATOM 17 C5 A B 187 17.029 -0.911 86.115 1.00122.93 C
ATOM 18 C6 A B 187 16.547 0.331 86.572 1.00128.44 C
ATOM 19 N6 A B 187 15.502 0.467 87.394 1.00132.81 N
ATOM 20 N1 A B 187 17.180 1.444 86.142 1.00128.15 N
ATOM 21 C2 A B 187 18.216 1.310 85.308 1.00123.90 C
ATOM 22 N3 A B 187 18.754 0.204 84.802 1.00123.43 N
ATOM 23 C4 A B 187 18.107 -0.886 85.250 1.00122.90 C
ATOM 24 P A B 188 20.892 -7.375 84.429 1.00105.60 P
ATOM 25 OP1 A B 188 21.408 -8.344 83.423 1.00101.84 O
ATOM 26 OP2 A B 188 19.564 -7.602 85.058 1.00110.98 O
ATOM 27 O5' A B 188 21.969 -7.255 85.590 1.00101.59 O
TER
Atoms:
OP1: (7.014,-0.282,86.279)
OP2: (9.377,-0.758,85.405)
C3': (10.420,2.075,84.166)
C1': (12.254,0.532,83.978)
C5': (10.220,1.829,86.752)
O6: (14.929,-4.541,82.108)
O4': (11.820,0.550,85.323)
C8: (11.925,-1.986,83.848)
C2: (15.813,-1.086,82.042)
C6: (14.809,-3.318,82.294)
C5: (13.728,-2.604,82.896)
C4: (13.815,-1.227,83.003)
P: (8.488,-0.132,86.411)
C4': (11.076,1.771,85.504)
C2': (11.051,1.065,83.194)
O2': (11.393,1.617,81.938)
N1: (15.826,-2.456,81.889)
N2: (16.893,-0.432,81.589)
N3: (14.818,-0.412,82.598)
N7: (12.531,-3.064,83.430)
N9: (12.645,-0.836,83.625)
O5': (8.881,1.414,86.462)
O3': (10.660,3.434,83.845)
OP2: (9.377,-0.758,85.405)
C3': (10.420,2.075,84.166)
C1': (12.254,0.532,83.978)
C5': (10.220,1.829,86.752)
O6: (14.929,-4.541,82.108)
O4': (11.820,0.550,85.323)
C8: (11.925,-1.986,83.848)
C2: (15.813,-1.086,82.042)
C6: (14.809,-3.318,82.294)
C5: (13.728,-2.604,82.896)
C4: (13.815,-1.227,83.003)
P: (8.488,-0.132,86.411)
C4': (11.076,1.771,85.504)
C2': (11.051,1.065,83.194)
O2': (11.393,1.617,81.938)
N1: (15.826,-2.456,81.889)
N2: (16.893,-0.432,81.589)
N3: (14.818,-0.412,82.598)
N7: (12.531,-3.064,83.430)
N9: (12.645,-0.836,83.625)
O5': (8.881,1.414,86.462)
O3': (10.660,3.434,83.845)
OP1: (18.228,-8.920,80.742)
OP2: (16.135,-7.445,81.014)
C3': (19.814,-5.015,84.009)
C1': (19.408,-2.671,84.019)
C5': (17.998,-5.377,82.208)
O4': (18.772,-3.216,82.881)
C8: (17.448,-2.941,85.639)
O2': (21.677,-3.438,84.145)
C6: (16.547,0.331,86.572)
C5: (17.029,-0.911,86.115)
C4: (18.107,-0.886,85.250)
P: (17.608,-7.571,80.804)
C4': (19.201,-4.582,82.681)
C2': (20.368,-3.717,84.590)
C2: (18.216,1.310,85.308)
N1: (17.180,1.444,86.142)
N3: (18.754,0.204,84.802)
N6: (15.502,0.467,87.394)
N7: (16.624,-2.216,86.358)
N9: (18.367,-2.201,84.937)
O5': (18.354,-6.733,81.939)
O3': (20.886,-5.916,83.758)
OP2: (16.135,-7.445,81.014)
C3': (19.814,-5.015,84.009)
C1': (19.408,-2.671,84.019)
C5': (17.998,-5.377,82.208)
O4': (18.772,-3.216,82.881)
C8: (17.448,-2.941,85.639)
O2': (21.677,-3.438,84.145)
C6: (16.547,0.331,86.572)
C5: (17.029,-0.911,86.115)
C4: (18.107,-0.886,85.250)
P: (17.608,-7.571,80.804)
C4': (19.201,-4.582,82.681)
C2': (20.368,-3.717,84.590)
C2: (18.216,1.310,85.308)
N1: (17.180,1.444,86.142)
N3: (18.754,0.204,84.802)
N6: (15.502,0.467,87.394)
N7: (16.624,-2.216,86.358)
N9: (18.367,-2.201,84.937)
O5': (18.354,-6.733,81.939)
O3': (20.886,-5.916,83.758)
Image (generated by PyMOL):