Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:9113:912
Extra
PDB:
ATOM 1 O3' C A 112 54.851 30.369 113.387 1.00 64.37 O
ATOM 2 P G A 113 54.390 29.603 112.056 1.00 66.53 P
ATOM 3 OP1 G A 113 53.709 28.336 112.447 1.00 66.06 O
ATOM 4 OP2 G A 113 55.561 29.559 111.130 1.00 66.83 O
ATOM 5 O5' G A 113 53.299 30.595 111.456 1.00 65.33 O
ATOM 6 C5' G A 113 52.575 30.285 110.259 1.00 62.29 C
ATOM 7 C4' G A 113 51.795 31.497 109.819 1.00 60.77 C
ATOM 8 O4' G A 113 52.708 32.530 109.369 1.00 58.91 O
ATOM 9 C3' G A 113 50.870 31.298 108.639 1.00 59.96 C
ATOM 10 O3' G A 113 49.655 30.724 109.077 1.00 61.57 O
ATOM 11 C2' G A 113 50.689 32.722 108.143 1.00 58.33 C
ATOM 12 O2' G A 113 49.806 33.461 108.965 1.00 58.00 O
ATOM 13 C1' G A 113 52.104 33.272 108.325 1.00 56.72 C
ATOM 14 N9 G A 113 52.938 33.156 107.132 1.00 54.51 N
ATOM 15 C8 G A 113 54.034 32.345 106.950 1.00 54.34 C
ATOM 16 N7 G A 113 54.586 32.487 105.776 1.00 52.94 N
ATOM 17 C5 G A 113 53.803 33.439 105.142 1.00 52.39 C
ATOM 18 C6 G A 113 53.910 33.997 103.851 1.00 51.54 C
ATOM 19 O6 G A 113 54.744 33.748 102.978 1.00 49.89 O
ATOM 20 N1 G A 113 52.905 34.937 103.614 1.00 51.16 N
ATOM 21 C2 G A 113 51.924 35.287 104.511 1.00 50.38 C
ATOM 22 N2 G A 113 51.048 36.207 104.117 1.00 48.45 N
ATOM 23 N3 G A 113 51.814 34.770 105.714 1.00 52.76 N
ATOM 24 C4 G A 113 52.780 33.859 105.965 1.00 53.89 C
ATOM 25 P C A 114 49.008 29.511 108.254 1.00 64.73 P
ATOM 26 OP1 C A 114 48.178 28.764 109.233 1.00 64.84 O
ATOM 27 OP2 C A 114 50.069 28.795 107.484 1.00 64.11 O
ATOM 28 O5' C A 114 48.037 30.231 107.216 1.00 63.71 O
TER
ATOM 1 O3' C B 11 53.125 37.463 111.971 1.00 59.87 O
ATOM 2 P A B 12 54.570 36.834 112.235 1.00 59.96 P
ATOM 3 OP1 A B 12 54.434 35.796 113.281 1.00 61.36 O
ATOM 4 OP2 A B 12 55.534 37.948 112.438 1.00 58.91 O
ATOM 5 O5' A B 12 54.898 36.116 110.857 1.00 58.41 O
ATOM 6 C5' A B 12 54.911 34.692 110.752 1.00 55.80 C
ATOM 7 C4' A B 12 55.652 34.289 109.510 1.00 55.75 C
ATOM 8 O4' A B 12 54.878 34.700 108.347 1.00 55.33 O
ATOM 9 C3' A B 12 57.025 34.939 109.354 1.00 55.39 C
ATOM 10 O3' A B 12 57.891 34.035 108.675 1.00 55.31 O
ATOM 11 C2' A B 12 56.709 36.127 108.453 1.00 55.41 C
ATOM 12 O2' A B 12 57.796 36.634 107.714 1.00 55.03 O
ATOM 13 C1' A B 12 55.687 35.499 107.515 1.00 56.02 C
ATOM 14 N9 A B 12 54.857 36.468 106.801 1.00 56.09 N
ATOM 15 C8 A B 12 53.771 37.188 107.238 1.00 55.08 C
ATOM 16 N7 A B 12 53.289 38.013 106.339 1.00 53.83 N
ATOM 17 C5 A B 12 54.104 37.815 105.235 1.00 54.84 C
ATOM 18 C6 A B 12 54.118 38.394 103.957 1.00 56.24 C
ATOM 19 N6 A B 12 53.256 39.332 103.564 1.00 56.66 N
ATOM 20 N1 A B 12 55.064 37.973 103.085 1.00 57.07 N
ATOM 21 C2 A B 12 55.932 37.028 103.487 1.00 56.36 C
ATOM 22 N3 A B 12 56.018 36.409 104.662 1.00 54.34 N
ATOM 23 C4 A B 12 55.065 36.856 105.501 1.00 55.44 C
ATOM 24 P G B 13 59.199 33.462 109.416 1.00 56.40 P
ATOM 25 OP1 G B 13 59.639 32.295 108.618 1.00 56.87 O
ATOM 26 OP2 G B 13 58.938 33.304 110.875 1.00 55.63 O
ATOM 27 O5' G B 13 60.301 34.598 109.227 1.00 57.41 O
TER
ATOM 2 P G A 113 54.390 29.603 112.056 1.00 66.53 P
ATOM 3 OP1 G A 113 53.709 28.336 112.447 1.00 66.06 O
ATOM 4 OP2 G A 113 55.561 29.559 111.130 1.00 66.83 O
ATOM 5 O5' G A 113 53.299 30.595 111.456 1.00 65.33 O
ATOM 6 C5' G A 113 52.575 30.285 110.259 1.00 62.29 C
ATOM 7 C4' G A 113 51.795 31.497 109.819 1.00 60.77 C
ATOM 8 O4' G A 113 52.708 32.530 109.369 1.00 58.91 O
ATOM 9 C3' G A 113 50.870 31.298 108.639 1.00 59.96 C
ATOM 10 O3' G A 113 49.655 30.724 109.077 1.00 61.57 O
ATOM 11 C2' G A 113 50.689 32.722 108.143 1.00 58.33 C
ATOM 12 O2' G A 113 49.806 33.461 108.965 1.00 58.00 O
ATOM 13 C1' G A 113 52.104 33.272 108.325 1.00 56.72 C
ATOM 14 N9 G A 113 52.938 33.156 107.132 1.00 54.51 N
ATOM 15 C8 G A 113 54.034 32.345 106.950 1.00 54.34 C
ATOM 16 N7 G A 113 54.586 32.487 105.776 1.00 52.94 N
ATOM 17 C5 G A 113 53.803 33.439 105.142 1.00 52.39 C
ATOM 18 C6 G A 113 53.910 33.997 103.851 1.00 51.54 C
ATOM 19 O6 G A 113 54.744 33.748 102.978 1.00 49.89 O
ATOM 20 N1 G A 113 52.905 34.937 103.614 1.00 51.16 N
ATOM 21 C2 G A 113 51.924 35.287 104.511 1.00 50.38 C
ATOM 22 N2 G A 113 51.048 36.207 104.117 1.00 48.45 N
ATOM 23 N3 G A 113 51.814 34.770 105.714 1.00 52.76 N
ATOM 24 C4 G A 113 52.780 33.859 105.965 1.00 53.89 C
ATOM 25 P C A 114 49.008 29.511 108.254 1.00 64.73 P
ATOM 26 OP1 C A 114 48.178 28.764 109.233 1.00 64.84 O
ATOM 27 OP2 C A 114 50.069 28.795 107.484 1.00 64.11 O
ATOM 28 O5' C A 114 48.037 30.231 107.216 1.00 63.71 O
TER
ATOM 1 O3' C B 11 53.125 37.463 111.971 1.00 59.87 O
ATOM 2 P A B 12 54.570 36.834 112.235 1.00 59.96 P
ATOM 3 OP1 A B 12 54.434 35.796 113.281 1.00 61.36 O
ATOM 4 OP2 A B 12 55.534 37.948 112.438 1.00 58.91 O
ATOM 5 O5' A B 12 54.898 36.116 110.857 1.00 58.41 O
ATOM 6 C5' A B 12 54.911 34.692 110.752 1.00 55.80 C
ATOM 7 C4' A B 12 55.652 34.289 109.510 1.00 55.75 C
ATOM 8 O4' A B 12 54.878 34.700 108.347 1.00 55.33 O
ATOM 9 C3' A B 12 57.025 34.939 109.354 1.00 55.39 C
ATOM 10 O3' A B 12 57.891 34.035 108.675 1.00 55.31 O
ATOM 11 C2' A B 12 56.709 36.127 108.453 1.00 55.41 C
ATOM 12 O2' A B 12 57.796 36.634 107.714 1.00 55.03 O
ATOM 13 C1' A B 12 55.687 35.499 107.515 1.00 56.02 C
ATOM 14 N9 A B 12 54.857 36.468 106.801 1.00 56.09 N
ATOM 15 C8 A B 12 53.771 37.188 107.238 1.00 55.08 C
ATOM 16 N7 A B 12 53.289 38.013 106.339 1.00 53.83 N
ATOM 17 C5 A B 12 54.104 37.815 105.235 1.00 54.84 C
ATOM 18 C6 A B 12 54.118 38.394 103.957 1.00 56.24 C
ATOM 19 N6 A B 12 53.256 39.332 103.564 1.00 56.66 N
ATOM 20 N1 A B 12 55.064 37.973 103.085 1.00 57.07 N
ATOM 21 C2 A B 12 55.932 37.028 103.487 1.00 56.36 C
ATOM 22 N3 A B 12 56.018 36.409 104.662 1.00 54.34 N
ATOM 23 C4 A B 12 55.065 36.856 105.501 1.00 55.44 C
ATOM 24 P G B 13 59.199 33.462 109.416 1.00 56.40 P
ATOM 25 OP1 G B 13 59.639 32.295 108.618 1.00 56.87 O
ATOM 26 OP2 G B 13 58.938 33.304 110.875 1.00 55.63 O
ATOM 27 O5' G B 13 60.301 34.598 109.227 1.00 57.41 O
TER
Atoms:
OP1: (53.709,28.336,112.447)
OP2: (55.561,29.559,111.130)
C3': (50.870,31.298,108.639)
C1': (52.104,33.272,108.325)
C5': (52.575,30.285,110.259)
O6: (54.744,33.748,102.978)
O4': (52.708,32.530,109.369)
C8: (54.034,32.345,106.950)
C2: (51.924,35.287,104.511)
C6: (53.910,33.997,103.851)
C5: (53.803,33.439,105.142)
C4: (52.780,33.859,105.965)
P: (54.390,29.603,112.056)
C4': (51.795,31.497,109.819)
C2': (50.689,32.722,108.143)
O2': (49.806,33.461,108.965)
N1: (52.905,34.937,103.614)
N2: (51.048,36.207,104.117)
N3: (51.814,34.770,105.714)
N7: (54.586,32.487,105.776)
N9: (52.938,33.156,107.132)
O5': (53.299,30.595,111.456)
O3': (49.655,30.724,109.077)
OP2: (55.561,29.559,111.130)
C3': (50.870,31.298,108.639)
C1': (52.104,33.272,108.325)
C5': (52.575,30.285,110.259)
O6: (54.744,33.748,102.978)
O4': (52.708,32.530,109.369)
C8: (54.034,32.345,106.950)
C2: (51.924,35.287,104.511)
C6: (53.910,33.997,103.851)
C5: (53.803,33.439,105.142)
C4: (52.780,33.859,105.965)
P: (54.390,29.603,112.056)
C4': (51.795,31.497,109.819)
C2': (50.689,32.722,108.143)
O2': (49.806,33.461,108.965)
N1: (52.905,34.937,103.614)
N2: (51.048,36.207,104.117)
N3: (51.814,34.770,105.714)
N7: (54.586,32.487,105.776)
N9: (52.938,33.156,107.132)
O5': (53.299,30.595,111.456)
O3': (49.655,30.724,109.077)
OP1: (54.434,35.796,113.281)
OP2: (55.534,37.948,112.438)
C3': (57.025,34.939,109.354)
C1': (55.687,35.499,107.515)
C5': (54.911,34.692,110.752)
O4': (54.878,34.700,108.347)
C8: (53.771,37.188,107.238)
O2': (57.796,36.634,107.714)
C6: (54.118,38.394,103.957)
C5: (54.104,37.815,105.235)
C4: (55.065,36.856,105.501)
P: (54.570,36.834,112.235)
C4': (55.652,34.289,109.510)
C2': (56.709,36.127,108.453)
C2: (55.932,37.028,103.487)
N1: (55.064,37.973,103.085)
N3: (56.018,36.409,104.662)
N6: (53.256,39.332,103.564)
N7: (53.289,38.013,106.339)
N9: (54.857,36.468,106.801)
O5': (54.898,36.116,110.857)
O3': (57.891,34.035,108.675)
OP2: (55.534,37.948,112.438)
C3': (57.025,34.939,109.354)
C1': (55.687,35.499,107.515)
C5': (54.911,34.692,110.752)
O4': (54.878,34.700,108.347)
C8: (53.771,37.188,107.238)
O2': (57.796,36.634,107.714)
C6: (54.118,38.394,103.957)
C5: (54.104,37.815,105.235)
C4: (55.065,36.856,105.501)
P: (54.570,36.834,112.235)
C4': (55.652,34.289,109.510)
C2': (56.709,36.127,108.453)
C2: (55.932,37.028,103.487)
N1: (55.064,37.973,103.085)
N3: (56.018,36.409,104.662)
N6: (53.256,39.332,103.564)
N7: (53.289,38.013,106.339)
N9: (54.857,36.468,106.801)
O5': (54.898,36.116,110.857)
O3': (57.891,34.035,108.675)
Image (generated by PyMOL):