Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2BNY:S1:S12
Extra
PDB:
ATOM 1 P G A 1 -85.807 -42.613 -41.359 0.50 83.46 P
ATOM 2 OP1 G A 1 -86.448 -42.451 -42.690 0.50 83.07 O
ATOM 3 OP2 G A 1 -86.428 -43.510 -40.351 0.50 83.85 O
ATOM 4 O5' G A 1 -84.295 -43.074 -41.566 0.50 81.13 O
ATOM 5 C5' G A 1 -83.505 -42.539 -42.625 0.50 77.42 C
ATOM 6 C4' G A 1 -82.166 -43.240 -42.699 0.50 74.26 C
ATOM 7 O4' G A 1 -81.379 -42.938 -41.518 0.50 74.23 O
ATOM 8 C3' G A 1 -82.202 -44.758 -42.726 0.50 71.84 C
ATOM 9 O3' G A 1 -82.451 -45.232 -44.040 0.50 67.96 O
ATOM 10 C2' G A 1 -80.792 -45.120 -42.271 0.50 71.76 C
ATOM 11 O2' G A 1 -79.839 -45.065 -43.312 0.50 70.40 O
ATOM 12 C1' G A 1 -80.505 -44.021 -41.244 0.50 72.84 C
ATOM 13 N9 G A 1 -80.733 -44.464 -39.874 0.50 73.05 N
ATOM 14 C8 G A 1 -81.910 -44.414 -39.169 0.50 73.05 C
ATOM 15 N7 G A 1 -81.809 -44.916 -37.969 0.50 73.35 N
ATOM 16 C5 G A 1 -80.483 -45.316 -37.874 0.50 73.55 C
ATOM 17 C6 G A 1 -79.784 -45.938 -36.808 0.50 73.74 C
ATOM 18 O6 G A 1 -80.215 -46.277 -35.699 0.50 74.04 O
ATOM 19 N1 G A 1 -78.450 -46.165 -37.135 0.50 73.38 N
ATOM 20 C2 G A 1 -77.864 -45.840 -38.332 0.50 72.92 C
ATOM 21 N2 G A 1 -76.563 -46.137 -38.454 0.50 72.63 N
ATOM 22 N3 G A 1 -78.505 -45.266 -39.336 0.50 73.18 N
ATOM 23 C4 G A 1 -79.803 -45.035 -39.039 0.50 73.39 C
ATOM 24 P A A 2 -83.779 -46.077 -44.340 0.50 65.06 P
ATOM 25 OP1 A A 2 -84.775 -45.152 -44.932 0.50 63.82 O
ATOM 26 OP2 A A 2 -84.125 -46.838 -43.116 0.50 64.85 O
ATOM 27 O5' A A 2 -83.326 -47.108 -45.465 0.50 64.30 O
TER
ATOM 1 O3' C B 11 -70.264 -46.923 -32.926 0.50 95.43 O
ATOM 2 P A B 12 -70.256 -45.322 -32.825 0.50 96.34 P
ATOM 3 OP1 A B 12 -68.845 -44.877 -32.705 0.50 96.46 O
ATOM 4 OP2 A B 12 -71.240 -44.941 -31.780 0.50 96.23 O
ATOM 5 O5' A B 12 -70.824 -44.833 -34.231 0.50 96.77 O
ATOM 6 C5' A B 12 -69.942 -44.425 -35.274 0.50 97.45 C
ATOM 7 C4' A B 12 -70.635 -43.447 -36.195 0.50 97.75 C
ATOM 8 O4' A B 12 -71.790 -44.093 -36.792 0.50 98.15 O
ATOM 9 C3' A B 12 -71.212 -42.204 -35.534 0.50 97.53 C
ATOM 10 O3' A B 12 -70.247 -41.190 -35.233 0.50 96.02 O
ATOM 11 C2' A B 12 -72.282 -41.782 -36.531 0.50 97.79 C
ATOM 12 O2' A B 12 -71.760 -41.090 -37.646 0.50 97.53 O
ATOM 13 C1' A B 12 -72.826 -43.143 -36.974 0.50 98.53 C
ATOM 14 N9 A B 12 -73.971 -43.566 -36.174 0.50 99.63 N
ATOM 15 C8 A B 12 -73.967 -44.291 -35.007 0.50100.06 C
ATOM 16 N7 A B 12 -75.162 -44.489 -34.506 0.50100.57 N
ATOM 17 C5 A B 12 -76.009 -43.857 -35.406 0.50100.89 C
ATOM 18 C6 A B 12 -77.405 -43.699 -35.441 0.50101.42 C
ATOM 19 N6 A B 12 -78.229 -44.179 -34.507 0.50102.23 N
ATOM 20 N1 A B 12 -77.934 -43.019 -36.481 0.50101.52 N
ATOM 21 C2 A B 12 -77.108 -42.532 -37.414 0.50101.18 C
ATOM 22 N3 A B 12 -75.782 -42.610 -37.489 0.50100.79 N
ATOM 23 C4 A B 12 -75.289 -43.292 -36.442 0.50100.35 C
TER
ATOM 2 OP1 G A 1 -86.448 -42.451 -42.690 0.50 83.07 O
ATOM 3 OP2 G A 1 -86.428 -43.510 -40.351 0.50 83.85 O
ATOM 4 O5' G A 1 -84.295 -43.074 -41.566 0.50 81.13 O
ATOM 5 C5' G A 1 -83.505 -42.539 -42.625 0.50 77.42 C
ATOM 6 C4' G A 1 -82.166 -43.240 -42.699 0.50 74.26 C
ATOM 7 O4' G A 1 -81.379 -42.938 -41.518 0.50 74.23 O
ATOM 8 C3' G A 1 -82.202 -44.758 -42.726 0.50 71.84 C
ATOM 9 O3' G A 1 -82.451 -45.232 -44.040 0.50 67.96 O
ATOM 10 C2' G A 1 -80.792 -45.120 -42.271 0.50 71.76 C
ATOM 11 O2' G A 1 -79.839 -45.065 -43.312 0.50 70.40 O
ATOM 12 C1' G A 1 -80.505 -44.021 -41.244 0.50 72.84 C
ATOM 13 N9 G A 1 -80.733 -44.464 -39.874 0.50 73.05 N
ATOM 14 C8 G A 1 -81.910 -44.414 -39.169 0.50 73.05 C
ATOM 15 N7 G A 1 -81.809 -44.916 -37.969 0.50 73.35 N
ATOM 16 C5 G A 1 -80.483 -45.316 -37.874 0.50 73.55 C
ATOM 17 C6 G A 1 -79.784 -45.938 -36.808 0.50 73.74 C
ATOM 18 O6 G A 1 -80.215 -46.277 -35.699 0.50 74.04 O
ATOM 19 N1 G A 1 -78.450 -46.165 -37.135 0.50 73.38 N
ATOM 20 C2 G A 1 -77.864 -45.840 -38.332 0.50 72.92 C
ATOM 21 N2 G A 1 -76.563 -46.137 -38.454 0.50 72.63 N
ATOM 22 N3 G A 1 -78.505 -45.266 -39.336 0.50 73.18 N
ATOM 23 C4 G A 1 -79.803 -45.035 -39.039 0.50 73.39 C
ATOM 24 P A A 2 -83.779 -46.077 -44.340 0.50 65.06 P
ATOM 25 OP1 A A 2 -84.775 -45.152 -44.932 0.50 63.82 O
ATOM 26 OP2 A A 2 -84.125 -46.838 -43.116 0.50 64.85 O
ATOM 27 O5' A A 2 -83.326 -47.108 -45.465 0.50 64.30 O
TER
ATOM 1 O3' C B 11 -70.264 -46.923 -32.926 0.50 95.43 O
ATOM 2 P A B 12 -70.256 -45.322 -32.825 0.50 96.34 P
ATOM 3 OP1 A B 12 -68.845 -44.877 -32.705 0.50 96.46 O
ATOM 4 OP2 A B 12 -71.240 -44.941 -31.780 0.50 96.23 O
ATOM 5 O5' A B 12 -70.824 -44.833 -34.231 0.50 96.77 O
ATOM 6 C5' A B 12 -69.942 -44.425 -35.274 0.50 97.45 C
ATOM 7 C4' A B 12 -70.635 -43.447 -36.195 0.50 97.75 C
ATOM 8 O4' A B 12 -71.790 -44.093 -36.792 0.50 98.15 O
ATOM 9 C3' A B 12 -71.212 -42.204 -35.534 0.50 97.53 C
ATOM 10 O3' A B 12 -70.247 -41.190 -35.233 0.50 96.02 O
ATOM 11 C2' A B 12 -72.282 -41.782 -36.531 0.50 97.79 C
ATOM 12 O2' A B 12 -71.760 -41.090 -37.646 0.50 97.53 O
ATOM 13 C1' A B 12 -72.826 -43.143 -36.974 0.50 98.53 C
ATOM 14 N9 A B 12 -73.971 -43.566 -36.174 0.50 99.63 N
ATOM 15 C8 A B 12 -73.967 -44.291 -35.007 0.50100.06 C
ATOM 16 N7 A B 12 -75.162 -44.489 -34.506 0.50100.57 N
ATOM 17 C5 A B 12 -76.009 -43.857 -35.406 0.50100.89 C
ATOM 18 C6 A B 12 -77.405 -43.699 -35.441 0.50101.42 C
ATOM 19 N6 A B 12 -78.229 -44.179 -34.507 0.50102.23 N
ATOM 20 N1 A B 12 -77.934 -43.019 -36.481 0.50101.52 N
ATOM 21 C2 A B 12 -77.108 -42.532 -37.414 0.50101.18 C
ATOM 22 N3 A B 12 -75.782 -42.610 -37.489 0.50100.79 N
ATOM 23 C4 A B 12 -75.289 -43.292 -36.442 0.50100.35 C
TER
Atoms:
OP1: (-86.448,-42.451,-42.690)
OP2: (-86.428,-43.510,-40.351)
C3': (-82.202,-44.758,-42.726)
C1': (-80.505,-44.021,-41.244)
C5': (-83.505,-42.539,-42.625)
O6: (-80.215,-46.277,-35.699)
O4': (-81.379,-42.938,-41.518)
C8: (-81.910,-44.414,-39.169)
C2: (-77.864,-45.840,-38.332)
C6: (-79.784,-45.938,-36.808)
C5: (-80.483,-45.316,-37.874)
C4: (-79.803,-45.035,-39.039)
P: (-85.807,-42.613,-41.359)
C4': (-82.166,-43.240,-42.699)
C2': (-80.792,-45.120,-42.271)
O2': (-79.839,-45.065,-43.312)
N1: (-78.450,-46.165,-37.135)
N2: (-76.563,-46.137,-38.454)
N3: (-78.505,-45.266,-39.336)
N7: (-81.809,-44.916,-37.969)
N9: (-80.733,-44.464,-39.874)
O5': (-84.295,-43.074,-41.566)
O3': (-82.451,-45.232,-44.040)
OP2: (-86.428,-43.510,-40.351)
C3': (-82.202,-44.758,-42.726)
C1': (-80.505,-44.021,-41.244)
C5': (-83.505,-42.539,-42.625)
O6: (-80.215,-46.277,-35.699)
O4': (-81.379,-42.938,-41.518)
C8: (-81.910,-44.414,-39.169)
C2: (-77.864,-45.840,-38.332)
C6: (-79.784,-45.938,-36.808)
C5: (-80.483,-45.316,-37.874)
C4: (-79.803,-45.035,-39.039)
P: (-85.807,-42.613,-41.359)
C4': (-82.166,-43.240,-42.699)
C2': (-80.792,-45.120,-42.271)
O2': (-79.839,-45.065,-43.312)
N1: (-78.450,-46.165,-37.135)
N2: (-76.563,-46.137,-38.454)
N3: (-78.505,-45.266,-39.336)
N7: (-81.809,-44.916,-37.969)
N9: (-80.733,-44.464,-39.874)
O5': (-84.295,-43.074,-41.566)
O3': (-82.451,-45.232,-44.040)
OP1: (-68.845,-44.877,-32.705)
OP2: (-71.240,-44.941,-31.780)
C3': (-71.212,-42.204,-35.534)
C1': (-72.826,-43.143,-36.974)
C5': (-69.942,-44.425,-35.274)
O4': (-71.790,-44.093,-36.792)
C8: (-73.967,-44.291,-35.007)
O2': (-71.760,-41.090,-37.646)
C6: (-77.405,-43.699,-35.441)
C5: (-76.009,-43.857,-35.406)
C4: (-75.289,-43.292,-36.442)
P: (-70.256,-45.322,-32.825)
C4': (-70.635,-43.447,-36.195)
C2': (-72.282,-41.782,-36.531)
C2: (-77.108,-42.532,-37.414)
N1: (-77.934,-43.019,-36.481)
N3: (-75.782,-42.610,-37.489)
N6: (-78.229,-44.179,-34.507)
N7: (-75.162,-44.489,-34.506)
N9: (-73.971,-43.566,-36.174)
O5': (-70.824,-44.833,-34.231)
O3': (-70.247,-41.190,-35.233)
OP2: (-71.240,-44.941,-31.780)
C3': (-71.212,-42.204,-35.534)
C1': (-72.826,-43.143,-36.974)
C5': (-69.942,-44.425,-35.274)
O4': (-71.790,-44.093,-36.792)
C8: (-73.967,-44.291,-35.007)
O2': (-71.760,-41.090,-37.646)
C6: (-77.405,-43.699,-35.441)
C5: (-76.009,-43.857,-35.406)
C4: (-75.289,-43.292,-36.442)
P: (-70.256,-45.322,-32.825)
C4': (-70.635,-43.447,-36.195)
C2': (-72.282,-41.782,-36.531)
C2: (-77.108,-42.532,-37.414)
N1: (-77.934,-43.019,-36.481)
N3: (-75.782,-42.610,-37.489)
N6: (-78.229,-44.179,-34.507)
N7: (-75.162,-44.489,-34.506)
N9: (-73.971,-43.566,-36.174)
O5': (-70.824,-44.833,-34.231)
O3': (-70.247,-41.190,-35.233)
Image (generated by PyMOL):